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Gene: Pogk (pogo transposable element derived with KRAB domain) Rattus norvegicus
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Symbol: Pogk
Name: pogo transposable element derived with KRAB domain
RGD ID: 1308951
Description: Predicted to have DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to nucleus. Orthologous to human POGK (pogo transposable element derived with KRAB domain); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC304941; pogo transposable element with KRAB domain
Orthologs:
Homo sapiens (human) : POGK (pogo transposable element derived with KRAB domain)  HGNC  Alliance
Mus musculus (house mouse) : Pogk (pogo transposable element with KRAB domain)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pogk (pogo transposable element derived with KRAB domain)
Pan paniscus (bonobo/pygmy chimpanzee) : POGK (pogo transposable element derived with KRAB domain)
Canis lupus familiaris (dog) : POGK (pogo transposable element derived with KRAB domain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pogk (pogo transposable element derived with KRAB domain)
Sus scrofa (pig) : POGK (pogo transposable element derived with KRAB domain)
Chlorocebus sabaeus (African green monkey) : POGK (pogo transposable element derived with KRAB domain)
Heterocephalus glaber (naked mole-rat) : Pogk (pogo transposable element derived with KRAB domain)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01384,603,126 - 84,619,042 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1384,603,126 - 84,619,042 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01389,463,024 - 89,493,305 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41382,125,644 - 82,141,560 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11382,144,844 - 82,175,821 (-)NCBI
Celera1378,356,003 - 78,371,918 (-)NCBICelera
Cytogenetic Map13q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
  
More on Pogk
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308951
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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