Gene: Gpatch1 (G patch domain containing 1) Rattus norvegicus
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Symbol: Gpatch1
Name: G patch domain containing 1
Description: ENCODES a protein that exhibits RNA binding (inferred); INVOLVED IN mRNA processing (inferred); FOUND IN catalytic step 2 spliceosome (ortholog); INTERACTS WITH bisphenol A; Soman; 2,3,7,8-tetrachlorodibenzodioxine (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: G patch domain-containing protein 1; Gpatc1; LOC292810
Orthologs:
Homo sapiens (human) : GPATCH1 (G-patch domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Gpatch1 (G patch domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gpatch1 (G-patch domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : GPATCH1 (G-patch domain containing 1)
Canis lupus familiaris (dog) : GPATCH1 (G-patch domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gpatch1 (G-patch domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0191,529,096 - 91,578,032 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0192,659,066 - 92,707,992 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4187,793,196 - 87,833,003 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1187,871,321 - 87,911,112 (-)NCBI
Celera182,275,388 - 82,324,013 (-)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gpatch1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308935
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2018-11-20
Status: ACTIVE