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Gene: C1qtnf5 (C1q and TNF related 5) Rattus norvegicus
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Symbol: C1qtnf5
Name: C1q and TNF related 5
Description: Predicted to have identical protein binding activity. Predicted to be involved in inner ear development; protein secretion; and protein trimerization. Predicted to localize to several cellular components, including the bicellular tight junction; extracellular space; and lateral plasma membrane. Human ortholog(s) of this gene implicated in isolated microphthalmia 5; late-onset retinal degeneration; microphthalmia; and retinitis pigmentosa. Orthologous to several human genes including C1QTNF5 (C1q and TNF related 5); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 3',5'-cyclic AMP.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Adie; adiponectin e; C1q and tumor necrosis factor related protein 5; complement C1q tumor necrosis factor-related protein 5; LOC315598; MGC109436
Orthologs:
Homo sapiens (human) : C1QTNF5 (C1q and TNF related 5)  HGNC  Alliance
Mus musculus (house mouse) : C1qtnf5 (C1q and tumor necrosis factor related protein 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : C1qtnf5 (C1q and TNF related 5)
Pan paniscus (bonobo/pygmy chimpanzee) : C1QTNF5 (C1q and TNF related 5)
Canis lupus familiaris (dog) : C1QTNF5 (C1q and TNF related 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : C1qtnf5 (C1q and TNF related 5)
Sus scrofa (pig) : C1QTNF5 (C1q and TNF related 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0848,443,515 - 48,445,639 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0847,059,344 - 47,061,466 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4847,089,564 - 47,091,434 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1847,098,329 - 47,100,200 (+)NCBI
Celera844,038,402 - 44,040,272 (+)NCBICelera
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on C1qtnf5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308802
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.