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Gene: Papola (poly (A) polymerase alpha) Rattus norvegicus

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Symbol:

Papola

Name:

poly (A) polymerase alpha

RGD ID:

1308673

Description:

Predicted to enable poly(A) RNA polymerase activity. Predicted to be involved in co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway. Predicted to act upstream of or within cytosolic mRNA polyadenylation. Predicted to be active in nucleus. Orthologous to human PAPOLA (poly(A) polymerase alpha); PARTICIPATES IN 3'-end pre-mRNA processing pathway; mRNA decay pathway; INTERACTS WITH bisphenol A; cadmium dichloride; finasteride.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC314417; poly(A) polymerase alpha

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PAPOLA (poly(A) polymerase alpha)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Papola (poly (A) polymerase alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Papola (poly(A) polymerase alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PAPOLA (poly(A) polymerase alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PAPOLA (poly(A) polymerase alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Papola (poly(A) polymerase alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PAPOLA (poly(A) polymerase alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PAPOLA (poly(A) polymerase alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Papola (poly(A) polymerase alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Papola (poly(A) polymerase alpha)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PAPOLB (poly(A) polymerase beta)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	PAPOLA (poly(A) polymerase alpha)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Papola (poly (A) polymerase alpha)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	papola (poly(A) polymerase alpha)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F43G6.5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PAP1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	hrg	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	T15H9.6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	pap-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	papola	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	papola	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	130,446,797 - 130,499,336 (+)	Ensembl				GRCr8
mRatBN7.2	6	124,682,015 - 124,734,706 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	124,682,105 - 124,734,468 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	124,805,328 - 124,857,217 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	125,100,600 - 125,152,495 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	124,459,911 - 124,512,012 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	129,609,068 - 129,662,002 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	129,609,074 - 129,661,531 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	138,806,949 - 138,860,091 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	129,936,041 - 129,988,481 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	122,248,215 - 122,300,581 (+)	NCBI		Celera
RGSC_v3.1	6	129,939,826 - 129,992,070 (+)	NCBI
Cytogenetic Map	6	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4,6-tribromophenol (ISO)

3,3'-diindolylmethane (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

AM-251 (ISO)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[b]fluoranthene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bortezomib (ISO)

Butylbenzyl phthalate (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

casticin (ISO)

chrysene (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

CU-O LINKAGE (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (ISO)

diazinon (ISO)

Dibutyl phosphate (ISO)

dorsomorphin (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

finasteride (EXP)

flutamide (EXP)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

hypochlorous acid (ISO)

ivermectin (ISO)

ketamine (EXP)

lead(0) (ISO)

methapyrilene (EXP)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

ochratoxin A (ISO)

ozone (ISO)

p-toluidine (EXP)

paracetamol (EXP)

pentachlorophenol (ISO)

perfluorooctanoic acid (EXP)

phenobarbital (ISO)

PhIP (EXP)

raloxifene (EXP)

resveratrol (ISO)

rotenone (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

Soman (EXP)

sunitinib (ISO)

tamibarotene (ISO)

tert-butyl hydroperoxide (ISO)

tetraphene (ISO)

thapsigargin (ISO)

toluene (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (EXP)

valproic acid (ISO)

versicolorin A (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (IEA,ISO)

cytosolic mRNA polyadenylation (IEA,ISO)

mRNA 3'-end processing (IEA,ISO)

mRNA processing (IEA)

RNA 3'-end processing (IEA)

Cellular Component

nucleoplasm (IEA,ISO)

nucleus (IBA,IEA)

Molecular Function

ATP binding (IEA)

metal ion binding (IEA)

nucleotide binding (IEA)

nucleotidyltransferase activity (IEA)

poly(A) RNA polymerase activity (IBA,IEA,ISO)

protein binding (ISO)

RNA binding (IEA)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

3'-end pre-mRNA processing pathway (ISO)

mRNA decay pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Means to an end: mechanisms of alternative polyadenylation of messenger RNA precursors.	Gruber AR, etal., Wiley Interdiscip Rev RNA. 2014 Mar-Apr;5(2):183-96. doi: 10.1002/wrna.1206. Epub 2013 Nov 14.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
6.	GOA pipeline	RGD automated data pipeline
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:7590244	PMID:12477932	PMID:18084034	PMID:19224921

Genomics

Comparative Map Data

Papola
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	130,446,797 - 130,499,336 (+)	Ensembl				GRCr8
mRatBN7.2	6	124,682,015 - 124,734,706 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	124,682,105 - 124,734,468 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	124,805,328 - 124,857,217 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	125,100,600 - 125,152,495 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	124,459,911 - 124,512,012 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	129,609,068 - 129,662,002 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	129,609,074 - 129,661,531 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	138,806,949 - 138,860,091 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	129,936,041 - 129,988,481 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	122,248,215 - 122,300,581 (+)	NCBI		Celera
RGSC_v3.1	6	129,939,826 - 129,992,070 (+)	NCBI
Cytogenetic Map	6	q32	NCBI

PAPOLA
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	96,502,376 - 96,567,116 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	96,501,433 - 96,567,118 (+)	Ensembl			hg38	GRCh38
GRCh37	14	96,968,713 - 97,033,453 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	96,038,473 - 96,103,201 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	96,038,472 - 96,103,199	NCBI
Celera	14	77,024,453 - 77,089,176 (+)	NCBI		Celera
Cytogenetic Map	14	q32.2	NCBI
HuRef	14	77,153,361 - 77,217,828 (+)	NCBI		HuRef
CHM1_1	14	96,907,469 - 96,972,173 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	90,733,979 - 90,798,717 (+)	NCBI		T2T-CHM13v2.0

Papola
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	105,750,926 - 105,805,208 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	105,750,953 - 105,805,203 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	105,784,677 - 105,838,949 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	105,784,694 - 105,838,944 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	107,022,912 - 107,077,154 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	106,200,701 - 106,237,910 (+)	NCBI		MGSCv36	mm8
Celera	12	107,034,314 - 107,073,596 (+)	NCBI		Celera
Cytogenetic Map	12	E	NCBI
cM Map	12	56.06	NCBI

Papola
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955438	18,267,517 - 18,335,148 (+)	Ensembl
ChiLan1.0	NW_004955438	18,267,515 - 18,334,379 (+)	NCBI	ChiLan1.0	ChiLan1.0

PAPOLA
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	97,660,579 - 97,729,598 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	96,878,320 - 96,946,102 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	77,131,944 - 77,199,108 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	96,454,378 - 96,518,038 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	96,454,378 - 96,518,038 (+)	Ensembl			panPan2	panpan1.1

PAPOLA
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	65,240,704 - 65,283,231 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	65,238,568 - 65,281,336 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	64,741,516 - 64,799,594 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	65,497,997 - 65,556,243 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	65,497,981 - 65,556,240 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	65,170,663 - 65,228,725 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	65,231,727 - 65,289,761 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	65,555,313 - 65,613,394 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Papola
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	9,248,518 - 9,312,352 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936604	770,054 - 834,609 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936604	770,050 - 833,950 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PAPOLA
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	117,676,398 - 117,741,911 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	117,676,083 - 117,740,348 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	124,934,722 - 124,999,355 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PAPOLA
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	74,388,643 - 74,452,368 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	74,388,612 - 74,453,162 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	61,538,781 - 61,602,201 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Papola
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624734	6,846,537 - 6,916,808 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Papola
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	123,435,771 - 123,488,303 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Papola
220 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	443
Count of miRNA genes:	227
Interacting mature miRNAs:	291
Transcripts:	ENSRNOT00000064957
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4145118	Mcs26	Mammary carcinoma susceptibility QTL 26		0.0001	mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	6	112483610	147156653	Rat
1331797	Bp213	Blood pressure QTL 213	3.291		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	114241077	147156653	Rat
2293088	Iddm28	Insulin dependent diabetes mellitus QTL 28	5.21		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	68767270	135411972	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	88019181	136741135	Rat
10054138	Gmadr3	Adrenal mass QTL 3	3.68	0.00045	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	6	90871046	135871046	Rat
1581563	Uae33	Urinary albumin excretion QTL 33			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	93560258	136550638	Rat
1641917	Colcr5	Colorectal carcinoma resistance QTL 5	3.18	0.0009	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	6	98944780	143944780	Rat
61414	Pia3	Pristane induced arthritis QTL 3	4.5		joint integrity trait (VT:0010548)	post-insult time to onset of experimental arthritis (CMO:0001450)	6	100704576	136029228	Rat
71111	Iddm8	Insulin dependent diabetes mellitus QTL 8	1.9	0.002	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	6	110921244	147156653	Rat
724524	Uae2	Urinary albumin excretion QTL 2	2.7	0.0005	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	79198463	144254945	Rat
1358355	Srcrt4	Stress Responsive Cort QTL 4	6.39		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	106095977	147156653	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	93778632	138778632	Rat
10054123	Srcrt6	Stress Responsive Cort QTL 6	2.5	0.0043	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	90871046	135871046	Rat
724536	Uae7	Urinary albumin excretion QTL 7	3.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	93560258	136550638	Rat
737976	Pia24	Pristane induced arthritis QTL 24			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	6	118366855	147156653	Rat
2313399	Anxrr28	Anxiety related response QTL 28			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	6	101593607	138161926	Rat
1298087	Iddm18	Insulin dependent diabetes mellitus QTL 18		0.0001	urine glucose amount (VT:0001758)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	6	122236101	147156653	Rat
1581550	Pur8	Proteinuria QTL 8			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	93560258	136550638	Rat
12801471	Schws9	Schwannoma susceptibility QTL 9			nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	101593607	146593607	Rat
2293085	Iddm29	Insulin dependent diabetes mellitus QTL 29	7.66		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	121444670	147156653	Rat

Markers in Region

RH132194

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	124,681,738 - 124,681,937 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	129,608,708 - 129,608,906	NCBI	Rnor6.0
Rnor_5.0	6	138,807,143 - 138,807,342	UniSTS	Rnor5.0
RGSC_v3.4	6	129,935,673 - 129,935,871	UniSTS	RGSC3.4
Celera	6	122,247,849 - 122,248,047	UniSTS
RH 3.4 Map	6	815.8	UniSTS
Cytogenetic Map	6	q32	UniSTS

BF394642

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	124,709,774 - 124,709,920 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	129,636,748 - 129,636,893	NCBI	Rnor6.0
Rnor_5.0	6	138,834,837 - 138,834,982	UniSTS	Rnor5.0
RGSC_v3.4	6	129,963,553 - 129,963,698	UniSTS	RGSC3.4
Celera	6	122,275,829 - 122,275,974	UniSTS
RH 3.4 Map	6	834.39	UniSTS
Cytogenetic Map	6	q32	UniSTS

BE114031

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	124,707,363 - 124,707,513 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	129,634,337 - 129,634,486	NCBI	Rnor6.0
Rnor_5.0	6	138,832,426 - 138,832,575	UniSTS	Rnor5.0
RGSC_v3.4	6	129,961,142 - 129,961,291	UniSTS	RGSC3.4
Celera	6	122,273,418 - 122,273,567	UniSTS
RH 3.4 Map	6	819.0	UniSTS
Cytogenetic Map	6	q32	UniSTS

MARC_17493-17494:1030378000:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	124,705,608 - 124,707,287 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	129,632,582 - 129,634,260	NCBI	Rnor6.0
Rnor_5.0	6	138,830,671 - 138,832,349	UniSTS	Rnor5.0
RGSC_v3.4	6	129,959,387 - 129,961,065	UniSTS	RGSC3.4
Celera	6	122,271,663 - 122,273,341	UniSTS
Cytogenetic Map	6	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC125847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC083612	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC167010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ229237	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000064957 ⟹ ENSRNOP00000060627

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	130,446,802 - 130,499,336 (+)	Ensembl
mRatBN7.2 Ensembl	6	124,682,518 - 124,734,235 (+)	Ensembl
Rnor_6.0 Ensembl	6	129,609,074 - 129,661,531 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000083732 ⟹ ENSRNOP00000071393

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	130,446,797 - 130,495,912 (+)	Ensembl
mRatBN7.2 Ensembl	6	124,682,105 - 124,731,111 (+)	Ensembl
Rnor_6.0 Ensembl	6	129,609,375 - 129,660,107 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091338 ⟹ ENSRNOP00000074439

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	124,694,101 - 124,707,537 (+)	Ensembl
Rnor_6.0 Ensembl	6	129,621,070 - 129,634,267 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099038 ⟹ ENSRNOP00000089253

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	130,447,139 - 130,497,337 (+)	Ensembl
mRatBN7.2 Ensembl	6	124,682,518 - 124,732,613 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102145 ⟹ ENSRNOP00000095888

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	130,446,797 - 130,497,278 (+)	Ensembl
mRatBN7.2 Ensembl	6	124,694,601 - 124,732,613 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105005 ⟹ ENSRNOP00000086045

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	124,682,105 - 124,731,280 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117130 ⟹ ENSRNOP00000082223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	130,446,802 - 130,499,336 (+)	Ensembl
mRatBN7.2 Ensembl	6	124,682,105 - 124,734,468 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117238 ⟹ ENSRNOP00000082198

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	130,446,797 - 130,497,278 (+)	Ensembl
mRatBN7.2 Ensembl	6	124,682,105 - 124,732,613 (+)	Ensembl

RefSeq Acc Id:

NM_001108056 ⟹ NP_001101526

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,801 - 130,498,900 (+)	NCBI
mRatBN7.2	6	124,682,105 - 124,734,235 (+)	NCBI
Rnor_6.0	6	129,609,074 - 129,661,531 (+)	NCBI
Rnor_5.0	6	138,806,949 - 138,860,091 (+)	NCBI
RGSC_v3.4	6	129,936,041 - 129,988,481 (+)	RGD
Celera	6	122,248,215 - 122,300,581 (+)	NCBI

Sequence:

show sequence

TAGAACGTTGCTGTGGTAGCGCTCGGGCGCCATGTTAGGACGAAGGGGAAGGAGGAGAAGCGCT
TAAAGCGGCGGGGCGCGGGTGCAGGACTGGGTTGGCCCTGGGGCTGAGGCAGGCCGCCGTCCCT
CCCGCCTCGGTGGATCATGCCCAGGGCGGCAGCGGTCGCGGGGGGGAAGTGACTGGGCGGTGCC
GGCGCCGGAGACGATGCCGTTTCCAGTTACAACGCAGGGATCACAACAAACGCAGCCGCCACAG
AGGCACTATGGCATTACCTCTCCTATCAGCTTAGCAGCCCCCAAGGAGACCGACTGCCTACTCA
CACAGAAACTCATCGAGACGCTGAAGCCCTTTGGGGTTTTTGAAGAAGAAGAGGAACTGCAGCG
CAGGATTTTAATTTTGGGAAAATTAAATAACCTGGTGAAAGAATGGATACGAGAAATCAGTGAA
AGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGAGGAAAAATTTTTACATTTGGATCCT
ACAGACTAGGAGTACATACGAAAGGTGCTGATATTGATGCGTTGTGTGTTGCACCAAGACATGT
TGATCGAAGTGATTTTTTCACCTCATTCTATGATAAATTGAAATTACAAGAAGAAGTGAAAGAT
TTAAGAGCTGTTGAAGAGGCATTTGTACCAGTTATCAAACTCTGTTTTGATGGAATAGAGATTG
ATATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGATTTGGACCTACGAGATGACAG
TCTGCTTAAAAACCTAGATATAAGATGCATAAGAAGCCTTAATGGTTGCAGGGTAACCGATGAG
ATTTTACATCTAGTACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCCATCAAACTGTGGG
CCAAACGGCACAACATCTATTCCAATATATTAGGTTTCCTCGGTGGTGTTTCCTGGGCTATGCT
AGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATAAATTTTTC
TTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTGCTATTGAAACAGCCTGAAGAATGCAATC
TTAATTTGCCTGTGTGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATAAT
TACACCAGCATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATG
GTTGAGGAGTTTAAACAAGGTCTTGCTATCACAGATGAAATTTTGCTGAGTAAGGCAGAGTGGT
CCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATTATATTGTACTTCTAGCAAG
TGCGCCCACGGAAAAGCAGCGTCTGGAATGGGTGGGCTTGGTGGAATCAAAAATTCGTATCCTG
GTTGGAAGTTTAGAGAAGAATGAGTTTATTACACTGGCTCATGTGAATCCCCAGTCATTTCCAG
CCCCCAAGGAAAGTCCTGATAGGGAAGAATTTCGCACAATGTGGGTGATTGGTTTAGTGTTTAA
AAAAACTGAAAACTCTGAGAATCTCAGTGTGGACCTCACCTATGATATCCAGTCTTTCACAGAC
ACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGTTGGATATGAAGATCGCAGCAATGC
ATGTGAAGAGAAAGCAGCTCCACCAGCTGCTGCCAAGTCATGTGCTTCAGAAGAGGAAGAAGCA
TTCAACAGAAGGAGTCAAGTTAGCAGCTCTGAATGACAGCAGCCTTGACTTGTCTATGGACAGT
GATAACAGCATGTCTGTGCCTTCACCCACCAGTGCTATGAAGACCAGTCCATTGAACAGTTCTG
GCAGCTCTCAGGGCAGAAACAGTCCTGCTCCAGCTGTGACCGCAGCATCTGTGACCAGCATTCA
GGCTTCTGAGGTTTCTGTACCACAAGCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGAGCGAA
AGCATTCCTCAAACTGCCACACAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTCTCCAGAG
TTGTCTCCTCAACACGACTGGTAAACCCGTCGCCTAGACCTTCAGGAAACGCAGCAACAAAAGT
ACCTAATCCTATAGTAGGAGTCAAGAGAACGTCCTCACCCCATAAAGAAGAAAGTCCTAAGAAA
ACCAAAACAGAAGAGGATGAAACAAGTGAAGATGCTAACTGTCTTGCTTTGAGTGGACATGATA
AAACAGAGACAAAGGAACAAGTTGGCATGGAGACAAGTGCGGCTCCGTCAGAAGCTGCTCCGGC
CTCGGCGTCTCTGGTGGCCTCTCAGAAAACATCCAGTACAGACCTTTCCGATATCCCTGCTCTC
CCTGCAAACCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGACTGAATCGGTAAAACCACC
TCAGGGTCCATAAACAGTATCTGCCAACTCAACCCGTTGTCTCCAGATGCTTAAACAAAAGAAA
GAAAGAAAAAAGAAAGGAGAAAGGAGATTGGAGGGACAGGACTAGCCCTGACTGACTGGGTTTA
GTCTTGGTGACCTCCCTTACTTGGGCTCATCAGCACTTGATCAGCAGTCCAGGTTAGTATGGAA
GCCAGGAGTACTGTTATTATTGTGTTAGCAACAGTTGCATTAACTATTTCAGAAAAATTACTGC
CTTTAAGAAGGAAAGAAAACAAAACCCTCAAGCTGCGTTTGTATCCATAATTGACATCCAGATT
GGGTTTATGTGTGATGATGCATTGTTTGGAAAATTGCAATACAAACTGGCATAAGAACTCCTTA
TTCTGATGATGCACTTTTATGTATTTTTTTTATTAGAAAGTAGAACTAATTTTAGATTTTCAGC
TTAATGGATTTTCAATTTTTTTCCCAAAGAATTTTCTTTACAATTAGTCTTTAAATTGGATTCC
TTGTGCAGTGGTGTACCATTCTGCCTCAGAAAGGACAGTAGGACACCTAGCTCAGTCCTTACGG
GCAGCTGTAACCCTTAGGGTGCATTGTCAATGCTAAGGTATACTTTGGACACTGAAAGAAGAAT
TAGGCGATACTTGGTTTTGATGAGGTTATGATTAAGAAGTATATATTCCTTTTATTTATAGAGT
TGTTTTATAGTGCATACAAATCAGCAGTCAGCCAACAAGTGTGGTCTTTGAGCTTTCTCAAGCT
CTGTTCTTTTGCCTTCAGTCTGTTAGTCTTTGAAACAACGACAGTGCTTTCTCCCCATCCCCCT
TTTTTCTTTTGCCTGTTTTTCCCTTTTGCTTGAATGCACAAGGTAAGGCTTATTTCACAGAAAC
CAGAATGCCAGTATTTTCCTAAGCCATGACATGTAACCGTGACCTGTGGCTACGTGACACAGAA
CACTAACGTTGGTCCCATGGCTAGAACTTGAGAATGACTGAAAGCCATACCCGTGAAGCATCTC
CGGAGGATGGCCATTTGATCTCTGAGAGGACTTTTGTACACTCCACAGAACTCCTGTTCCTGTC
TTACACAAAGTTGATTTTCAATTTTAAAAGTGGGCAAAAAGGCATTTTCTTCCAGATTTTTAAA
CTAATTTTTATTTTTAACCAGTTTATCAAAATTTGTCAGTGAATTTTACATACAGAAACATTTT
AAAAATCATTCCTAGTAAGCACTTGACGTTTAGTCAGCTCTCCACTTTTGAATTTTTTTGTTCT
ATCAAAAATTAGAAACTTCCTTTAAAGACAATGATTTCTCATAATTAAGTAGCAGAATTCTCGT
CCATCTTGTGACGTGTGAGGACGCCAGAGGTTGATAAGGTTCCTCTTGTCGATCTGGGTAGAGC
AGGCCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTCCAATCCTTCATCTCGCTGCATTCTAT
CACACATTTGTGCATTTTCACGTAACACTGCAATTAAACTCTCCTGTCCTCCTAAATTAATTTC
CAAAGTTGGAGTATAGTCTTTCCCTTCAGCTGTGCATTAATTAAGGCTTTCTTTACCACTTACA
TTGTTTATATACAGT

hide sequence

RefSeq Acc Id:

XM_006240521 ⟹ XP_006240583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI
mRatBN7.2	6	124,682,015 - 124,734,706 (+)	NCBI
Rnor_6.0	6	129,609,069 - 129,662,002 (+)	NCBI
Rnor_5.0	6	138,806,949 - 138,860,091 (+)	NCBI

Sequence:

show sequence

GATTCTAGAACGTTGCTGTGGTAGCGCTCGGGCGCCATGTTAGGACGAAGGGGAAGGAGGAGAA
GCGCTTAAAGCGGCGGGGCGCGGGTGCAGGACTGGGTTGGCCCTGGGGCTGAGGCAGGCCGCCG
TCCCTCCCGCCTCGGTGGATCATGCCCAGGGCGGCAGCGGTCGCGGGGGGGAAGTGACTGGGCG
GTGCCGGCGCCGGAGACGATGCCGTTTCCAGTTACAACGCAGGGATCACAACAAACGCAGCCGC
CACAGAGGCACTATGGCATTACCTCTCCTATCAGCTTAGCAGCCCCCAAGGAGACCGACTGCCT
ACTCACACAGAAACTCATCGAGACGCTGAAGCCCTTTGGGGTTTTTGAAGAAGAAGAGGAACTG
CAGCGCAGGATTTTAATTTTGGGAAAATTAAATAACCTGGTGAAAGAATGGATACGAGAAATCA
GTGAAAGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGAGGAAAAATTTTTACATTTGG
ATCCTACAGACTAGGAGTACATACGAAAGGTGCTGATATTGATGCGTTGTGTGTTGCACCAAGA
CATGTTGATCGAAGTGATTTTTTCACCTCATTCTATGATAAATTGAAATTACAAGAAGAAGTGA
AAGATTTAAGAGCTGTTGAAGAGGCATTTGTACCAGTTATCAAACTCTGTTTTGATGGAATAGA
GATTGATATTTTGTTTGCAAGATTAGCACTGCAGACTATTCCAGAAGATTTGGACCTACGAGAT
GACAGTCTGCTTAAAAACCTAGATATAAGATGCATAAGAAGCCTTAATGGTTGCAGGGTAACCG
ATGAGATTTTACATCTAGTACCAAACATTGACAACTTCAGGTTAACTCTGAGAGCCATCAAACT
GTGGGCCAAACGGCACAACATCTATTCCAATATATTAGGTTTCCTCGGTGGTGTTTCCTGGGCT
ATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATAAAT
TTTTCTTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTGCTATTGAAACAGCCTGAAGAATG
CAATCTTAATTTGCCTGTGTGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCT
ATAATTACACCAGCATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGG
TCATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACAGATGAAATTTTGCTGAGTAAGGCAGA
GTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATTATATTGTACTTCTA
GCAAGTGCGCCCACGGAAAAGCAGCGTCTGGAATGGGTGGGCTTGGTGGAATCAAAAATTCGTA
TCCTGGTTGGAAGTTTAGAGAAGAATGAGTTTATTACACTGGCTCATGTGAATCCCCAGTCATT
TCCAGCCCCCAAGGAAAGTCCTGATAGGGAAGAATTTCGCACAATGTGGGTGATTGGTTTAGTG
TTTAAAAAAACTGAAAACTCTGAGAATCTCAGTGTGGACCTCACCTATGATATCCAGTCTTTCA
CAGACACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGTTGGATATGAAGATCGCAGC
AATGCATGTGAAGAGAAAGCAGCTCCACCAGCTGCTGCCAAGTCATGTGCTTCAGAAGAGGAAG
AAGCATTCAACAGAAGGAGTCAAGTTAGCAGCTCTGAATGACAGCAGCCTTGACTTGTCTATGG
ACAGTGATAACAGCATGTCTGTGCCTTCACCCACCAGTGCTATGAAGACCAGTCCATTGAACAG
TTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCTCCAGCTGTGACCGCAGCATCTGTGACCAGC
ATTCAGGCTTCTGAGGTTTCTGTACCACAAGCAAATTCCAGTGAAAGCCCAGGGGGTCCATCGA
GCGAAAGCATTCCTCAAACTGCCACACAGCCAGCCATTTCTCCACCACCAAAGCCTACAGTCTC
CAGAGTTGTCTCCTCAACACGACTGGTAAACCCGTCGCCTAGACCTTCAGGAAACGCAGCAACA
AAAGTACCTAATCCTATAGTAGGAGTCAAGAGAACGTCCTCACCCCATAAAGAAGAAAGTCCTA
AGAAAACCAAAACAGAAGAGGATGAAACAAGTGAAGATGCTAACTGTCTTGCTTTGAGTGGACA
TGATAAAACAGAGACAAAGGAACAAGTTGGCATGGAGACAAGTGCGGCTCCGTCAGAAGCTGCT
CCGGCCTCGGCGTCTCTGGTGGCCTCTCAGGAGGAAGCAGTGGGAGACGCATCCCCTGTGAGCG
ACAGTGCTTTAAACCGTGCTGTGTTCTTTGCTTTCGTTCTCAGAAAACATCCAGTACAGACCTT
TCCGATATCCCTGCTCTCCCTGCAAACCCTATTCCTGTTATCAAGAATTCAATAAAACTGAGAC
TGAATCGGTAAAACCACCTCAGGGTCCATAAACAGTATCTGCCAACTCAACCCGTTGTCTCCAG
ATGCTTAAACAAAAGAAAGAAAGAAAAAAGAAAGGAGAAAGGAGATTGGAGGGACAGGACTAGC
CCTGACTGACTGGGTTTAGTCTTGGTGACCTCCCTTACTTGGGCTCATCAGCACTTGATCAGCA
GTCCAGGTTAGTATGGAAGCCAGGAGTACTGTTATTATTGTGTTAGCAACAGTTGCATTAACTA
TTTCAGAAAAATTACTGCCTTTAAGAAGGAAAGAAAACAAAACCCTCAAGCTGCGTTTGTATCC
ATAATTGACATCCAGATTGGGTTTATGTGTGATGATGCATTGTTTGGAAAATTGCAATACAAAC
TGGCATAAGAACTCCTTATTCTGATGATGCACTTTTATGTATTTTTTTTATTAGAAAGTAGAAC
TAATTTTAGATTTTCAGCTTAATGGATTTTCAATTTTTTTCCCAAAGAATTTTCTTTACAATTA
GTCTTTAAATTGGATTCCTTGTGCAGTGGTGTACCATTCTGCCTCAGAAAGGACAGTAGGACAC
CTAGCTCAGTCCTTACGGGCAGCTGTAACCCTTAGGGTGCATTGTCAATGCTAAGGTATACTTT
GGACACTGAAAGAAGAATTAGGCGATACTTGGTTTTGATGAGGTTATGATTAAGAAGTATATAT
TCCTTTTATTTATAGAGTTGTTTTATAGTGCATACAAATCAGCAGTCAGCCAACAAGTGTGGTC
TTTGAGCTTTCTCAAGCTCTGTTCTTTTGCCTTCAGTCTGTTAGTCTTTGAAACAACGACAGTG
CTTTCTCCCCATCCCCCTTTTTTCTTTTGCCTGTTTTTCCCTTTTGCTTGAATGCACAAGGTAA
GGCTTATTTCACAGAAACCAGAATGCCAGTATTTTCCTAAGCCATGACATGTAACCGTGACCTG
TGGCTACGTGACACAGAACACTAACGTTGGTCCCATGGCTAGAACTTGAGAATGACTGAAAGCC
ATACCCGTGAAGCATCTCCGGAGGATGGCCATTTGATCTCTGAGAGGACTTTTGTACACTCCAC
AGAACTCCTGTTCCTGTCTTACACAAAGTTGATTTTCAATTTTAAAAGTGGGCAAAAAGGCATT
TTCTTCCAGATTTTTAAACTAATTTTTATTTTTAACCAGTTTATCAAAATTTGTCAGTGAATTT
TACATACAGAAACATTTTAAAAATCATTCCTAGTAAGCACTTGACGTTTAGTCAGCTCTCCACT
TTTGAATTTTTTTGTTCTATCAAAAATTAGAAACTTCCTTTAAAGACAATGATTTCTCATAATT
AAGTAGCAGAATTCTCGTCCATCTTGTGACGTGTGAGGACGCCAGAGGTTGATAAGGTTCCTCT
TGTCGATCTGGGTAGAGCAGGCCTGTAGCAGCAGATCTTTGTATGAGCATGGTTTCCAATCCTT
CATCTCGCTGCATTCTATCACACATTTGTGCATTTTCACGTAACACTGCAATTAAACTCTCCTG
TCCTCCTAAATTAATTTCCAAAGTTGGAGTATAGTCTTTCCCTTCAGCTGTGCATTAATTAAGG
CTTTCTTTACCACTTACATTGTTTATATACAGTGTTCTTTCTGCTCTCCACCTCTCGCTCTGCA
GTCACCTTGCCCTCCCTCCCTCCCTGCCTCCCTCCCTCCCACCACTTGAGTAAAGAAGACAGTT
CGCTAACAGGTGACATGTCCCGTGTCTGTGTGTGTAGCTGCAGAGTTAGATTGACATCACCAGG
CACAGATTTAGTCTTGTCGTTTTGTTTACACATTGGGGAAAAATTCAGTTTAATAAACGTTCCA
TGTAACTGCATCCAAGTTTCACCAGGCTGGAGACGTGGATCTTTTCTGTGTAGTGACTTTTTAC
TTCTAGTTTCCATAACCTGGAGATCAGACTGTTGCTTTCGCATGATGTAAGTAGTGTCTCATGA
CTGGAGTTTGCTTTGTTTTATAGTATCTGTACTCCTTGTATTTTTCAAGAGCTATTTTGTAAAC
AGATGATGTATTTCTCCATTGAAAACACAATAAAAAAAAAAAAGGCACAAATCCCA

hide sequence

RefSeq Acc Id:

XM_039112391 ⟹ XP_038968319

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI
mRatBN7.2	6	124,682,384 - 124,734,706 (+)	NCBI

RefSeq Acc Id:

XM_039112392 ⟹ XP_038968320

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,447,099 - 130,499,371 (+)	NCBI
mRatBN7.2	6	124,682,389 - 124,734,706 (+)	NCBI

RefSeq Acc Id:

XM_039112393 ⟹ XP_038968321

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI
mRatBN7.2	6	124,682,387 - 124,734,706 (+)	NCBI

RefSeq Acc Id:

XM_039112394 ⟹ XP_038968322

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI
mRatBN7.2	6	124,682,386 - 124,734,706 (+)	NCBI

RefSeq Acc Id:

XM_039112395 ⟹ XP_038968323

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,447,099 - 130,499,371 (+)	NCBI
mRatBN7.2	6	124,682,389 - 124,734,706 (+)	NCBI

RefSeq Acc Id:

XM_039112396 ⟹ XP_038968324

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,447,097 - 130,499,371 (+)	NCBI
mRatBN7.2	6	124,682,387 - 124,734,706 (+)	NCBI

RefSeq Acc Id:

XM_039112397 ⟹ XP_038968325

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI
mRatBN7.2	6	124,682,346 - 124,734,706 (+)	NCBI

RefSeq Acc Id:

XM_039112398 ⟹ XP_038968326

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,459,437 - 130,499,371 (+)	NCBI
mRatBN7.2	6	124,694,740 - 124,734,706 (+)	NCBI

RefSeq Acc Id:

XM_063262005 ⟹ XP_063118075

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI

RefSeq Acc Id:

XM_063262006 ⟹ XP_063118076

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI

RefSeq Acc Id:

XM_063262007 ⟹ XP_063118077

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI

RefSeq Acc Id:

XM_063262008 ⟹ XP_063118078

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI

RefSeq Acc Id:

XM_063262009 ⟹ XP_063118079

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	130,446,236 - 130,499,371 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101526	(Get FASTA)	NCBI Sequence Viewer
	XP_006240583	(Get FASTA)	NCBI Sequence Viewer
	XP_038968319	(Get FASTA)	NCBI Sequence Viewer
	XP_038968320	(Get FASTA)	NCBI Sequence Viewer
	XP_038968321	(Get FASTA)	NCBI Sequence Viewer
	XP_038968322	(Get FASTA)	NCBI Sequence Viewer
	XP_038968323	(Get FASTA)	NCBI Sequence Viewer
	XP_038968324	(Get FASTA)	NCBI Sequence Viewer
	XP_038968325	(Get FASTA)	NCBI Sequence Viewer
	XP_038968326	(Get FASTA)	NCBI Sequence Viewer
	XP_063118075	(Get FASTA)	NCBI Sequence Viewer
	XP_063118076	(Get FASTA)	NCBI Sequence Viewer
	XP_063118077	(Get FASTA)	NCBI Sequence Viewer
	XP_063118078	(Get FASTA)	NCBI Sequence Viewer
	XP_063118079	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI67010	(Get FASTA)	NCBI Sequence Viewer
	EDL97595	(Get FASTA)	NCBI Sequence Viewer
	EDL97596	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000060627
	ENSRNOP00000060627.3
	ENSRNOP00000071393.3
	ENSRNOP00000082198.1
	ENSRNOP00000082223
	ENSRNOP00000082223.2
	ENSRNOP00000089253
	ENSRNOP00000089253.2
	ENSRNOP00000095888.2

RefSeq Acc Id:

NP_001101526 ⟸ NM_001108056

- UniProtKB:

A6KBD5 (UniProtKB/TrEMBL), A0A0G2K0C9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPFPVTTQGSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILI
LGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD
FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKN
LDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART
CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAY
PQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTE
KQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREEFRTMWVIGLVFKKTEN
SENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEG
VKLAALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEV
SVPQANSSESPGGPSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPSPRPSGNAATKVPNPI
VGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTETKEQVGMETSAAPSEAAPASASL
VASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR

hide sequence

RefSeq Acc Id:	XP_006240583 ⟸ XM_006240521
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6G751 (UniProtKB/TrEMBL), A0A0G2K0C9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPFPVTTQGSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILI LGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSD FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKN LDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAY PQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTE KQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREEFRTMWVIGLVFKKTEN SENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEG VKLAALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEV SVPQANSSESPGGPSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPSPRPSGNAATKVPNPI VGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTETKEQVGMETSAAPSEAAPASASL VASQEEAVGDASPVSDSALNRAVFFAFVLRKHPVQTFPISLLSLQTLFLLSRIQ hide sequence

Ensembl Acc Id:

ENSRNOP00000074439 ⟸ ENSRNOT00000091338

Ensembl Acc Id:

ENSRNOP00000071393 ⟸ ENSRNOT00000083732

Ensembl Acc Id:

ENSRNOP00000060627 ⟸ ENSRNOT00000064957

RefSeq Acc Id:	XP_038968325 ⟸ XM_039112397
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K0C9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038968319 ⟸ XM_039112391
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K0C9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038968322 ⟸ XM_039112394
- Peptide Label:	isoform X6
- UniProtKB:	A0A0G2K0C9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038968321 ⟸ XM_039112393
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A6U9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038968324 ⟸ XM_039112396
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I6A6U9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038968320 ⟸ XM_039112392
- Peptide Label:	isoform X4
- UniProtKB:	D3ZK96 (UniProtKB/TrEMBL), A0A8I6A6U9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038968323 ⟸ XM_039112395
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6A6U9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038968326 ⟸ XM_039112398
- Peptide Label:	isoform X14

Ensembl Acc Id:

ENSRNOP00000082223 ⟸ ENSRNOT00000117130

Ensembl Acc Id:

ENSRNOP00000095888 ⟸ ENSRNOT00000102145

Ensembl Acc Id:

ENSRNOP00000086045 ⟸ ENSRNOT00000105005

Ensembl Acc Id:

ENSRNOP00000082198 ⟸ ENSRNOT00000117238

Ensembl Acc Id:

ENSRNOP00000089253 ⟸ ENSRNOT00000099038

RefSeq Acc Id:	XP_063118076 ⟸ XM_063262006
- Peptide Label:	isoform X8
- UniProtKB:	A0A0G2K0C9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118078 ⟸ XM_063262008
- Peptide Label:	isoform X12
- UniProtKB:	A0A8I6G740 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118075 ⟸ XM_063262005
- Peptide Label:	isoform X7
- UniProtKB:	A0A0G2K0C9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118077 ⟸ XM_063262007
- Peptide Label:	isoform X9
- UniProtKB:	A0A0G2K0C9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118079 ⟸ XM_063262009
- Peptide Label:	isoform X13
- UniProtKB:	A0A8I6G740 (UniProtKB/TrEMBL)

Protein Domains

Poly(A) polymerase central Poly(A) polymerase nucleotidyltransferase Poly(A) polymerase RNA-binding

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K0C9-F1-model_v2	AlphaFold	A0A0G2K0C9	1-754	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694817

Promoter ID:

EPDNEW_R5339

Type:

initiation region

Name:

Papola_1

Description:

poly polymerase alpha

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	129,609,083 - 129,609,143	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308673	AgrOrtholog
BioCyc Gene	G2FUF-36328	BioCyc
Ensembl Genes	ENSRNOG00000004827	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000064957	ENTREZGENE
	ENSRNOT00000064957.5	UniProtKB/TrEMBL
	ENSRNOT00000083732.3	UniProtKB/TrEMBL
	ENSRNOT00000099038	ENTREZGENE
	ENSRNOT00000099038.2	UniProtKB/TrEMBL
	ENSRNOT00000102145.2	UniProtKB/TrEMBL
	ENSRNOT00000117130	ENTREZGENE
	ENSRNOT00000117130.2	UniProtKB/TrEMBL
	ENSRNOT00000117238.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1410.10	UniProtKB/TrEMBL
	3.30.460.10	UniProtKB/TrEMBL
	Poly(A) polymerase predicted RNA binding domain	UniProtKB/TrEMBL
InterPro	NT_sf	UniProtKB/TrEMBL
	NuclTrfase_I_C	UniProtKB/TrEMBL
	PolA_pol_cen_dom	UniProtKB/TrEMBL
	PolA_pol_NTPase	UniProtKB/TrEMBL
	PolA_pol_RNA-bd_dom	UniProtKB/TrEMBL
	PolyA_polymerase	UniProtKB/TrEMBL
KEGG Report	rno:314417	UniProtKB/TrEMBL
NCBI Gene	314417	ENTREZGENE
PANTHER	POLY A POLYMERASE	UniProtKB/TrEMBL
	POLY(A) POLYMERASE ALPHA	UniProtKB/TrEMBL
Pfam	PAP_central	UniProtKB/TrEMBL
	PAP_NTPase	UniProtKB/TrEMBL
	PAP_RNA-bind	UniProtKB/TrEMBL
PhenoGen	Papola	PhenoGen
PIRSF	PolyA_polymerase	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000004827	RatGTEx
Superfamily-SCOP	PAP/OAS1 substrate-binding domain	UniProtKB/TrEMBL
	PAP_C	UniProtKB/TrEMBL
	SSF81301	UniProtKB/TrEMBL
UniProt	A0A0G2K0C9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A6U9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6APN2_RAT	UniProtKB/TrEMBL
	A0A8I6G740	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6G751	ENTREZGENE, UniProtKB/TrEMBL
	A6KBD5	ENTREZGENE, UniProtKB/TrEMBL
	B2RZ34_RAT	UniProtKB/TrEMBL
	D3ZK96	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Papola	poly (A) polymerase alpha	Papola_predicted	poly (A) polymerase alpha (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Papola_predicted	poly (A) polymerase alpha (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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RGD Manual Annotations

Imported Annotations - KEGG (archival)