Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tsen15 (tRNA splicing endonuclease subunit 15) Rattus norvegicus
Analyze
Symbol: Tsen15
Name: tRNA splicing endonuclease subunit 15
Description: Predicted to have nucleic acid binding activity and tRNA-intron endonuclease activity. Predicted to be involved in RNA phosphodiester bond hydrolysis, endonucleolytic and tRNA splicing, via endonucleolytic cleavage and ligation. Human ortholog(s) of this gene implicated in pontocerebellar hypoplasia. Orthologous to human TSEN15 (tRNA splicing endonuclease subunit 15); PARTICIPATES IN tRNA maturation pathway; INTERACTS WITH (+)-schisandrin B; bisphenol A; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC289083; LOC289083; RGD1308584; similar to RIKEN cDNA 5730449L18; tRNA splicing endonuclease 15 homolog; tRNA splicing endonuclease 15 homolog (S. cerevisiae); tRNA-splicing endonuclease subunit Sen15; TSEN15 tRNA splicing endonuclease subunit
Orthologs:
Homo sapiens (human) : TSEN15 (tRNA splicing endonuclease subunit 15)  HGNC  Alliance
Mus musculus (house mouse) : Tsen15 (tRNA splicing endonuclease subunit 15)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tsen15 (tRNA splicing endonuclease subunit 15)
Pan paniscus (bonobo/pygmy chimpanzee) : TSEN15 (tRNA splicing endonuclease subunit 15)
Canis lupus familiaris (dog) : TSEN15 (tRNA splicing endonuclease subunit 15)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tsen15 (tRNA splicing endonuclease subunit 15)
Sus scrofa (pig) : TSEN15 (tRNA splicing endonuclease subunit 15)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01369,765,093 - 69,781,019 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1369,765,091 - 69,781,019 (-)Ensembl
Rnor_5.01374,737,177 - 74,753,103 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41367,320,835 - 67,336,234 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11367,334,922 - 67,350,312 (-)NCBI
Celera1364,402,304 - 64,417,584 (-)NCBICelera
Cytogenetic Map13q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tsen15
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308584
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.