Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ppm1k (protein phosphatase, Mg2+/Mn2+ dependent, 1K) Rattus norvegicus
Analyze
Symbol: Ppm1k
Name: protein phosphatase, Mg2+/Mn2+ dependent, 1K
Description: Predicted to have magnesium-dependent protein serine/threonine phosphatase activity. Predicted to be involved in positive regulation of pyruvate dehydrogenase activity. Predicted to localize to the mitochondrial matrix. Human ortholog(s) of this gene implicated in maple syrup urine disease. Orthologous to human PPM1K (protein phosphatase, Mg2+/Mn2+ dependent 1K); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC312381; protein phosphatase 1K (PP2C domain containing); protein phosphatase 1K, mitochondrial; RGD1308501; similar to protein phosphatase type 1B (formely 2C), Mg-dependent, beta isoform
Orthologs:
Homo sapiens (human) : PPM1K (protein phosphatase, Mg2+/Mn2+ dependent 1K)  HGNC  Alliance
Mus musculus (house mouse) : Ppm1k (protein phosphatase 1K (PP2C domain containing))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ppm1k (protein phosphatase, Mg2+/Mn2+ dependent 1K)
Pan paniscus (bonobo/pygmy chimpanzee) : PPM1K (protein phosphatase, Mg2+/Mn2+ dependent 1K)
Canis lupus familiaris (dog) : PPM1K (protein phosphatase, Mg2+/Mn2+ dependent 1K)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ppm1k (protein phosphatase, Mg2+/Mn2+ dependent 1K)
Sus scrofa (pig) : PPM1K (protein phosphatase, Mg2+/Mn2+ dependent 1K)
more info ...
Is Marker For: Strains:   NP.P-(D4Rat119-D4Rat55)/Iusm  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0488,694,395 - 88,721,374 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04153,515,886 - 153,542,848 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4487,366,273 - 87,390,223 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1487,610,775 - 87,633,432 (+)NCBI
Celera482,377,577 - 82,401,560 (+)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ppm1k
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308501
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.