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Gene: Cfap20 (cilia and flagella associated protein 20) Rattus norvegicus
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Symbol: Cfap20
Name: cilia and flagella associated protein 20
Description: Predicted to be involved in several processes, including positive regulation of feeding behavior; protein polyglutamylation; and regulation of cell motility. Predicted to localize to microtubule organizing center; motile cilium; and nucleoplasm. Orthologous to human CFAP20 (cilia and flagella associated protein 20); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cilia- and flagella-associated protein 20; gene trap locus 3; gene trap locus 3 protein homolog; Gtl3; LOC307642; MGC124689; transcription factor IIB-like; UPF0468 protein C16orf80 homolog
Orthologs:
Homo sapiens (human) : CFAP20 (cilia and flagella associated protein 20)  HGNC  Alliance
Mus musculus (house mouse) : Cfap20 (cilia and flagella associated protein 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cfap20 (cilia and flagella associated protein 20)
Pan paniscus (bonobo/pygmy chimpanzee) : CFAP20 (cilia and flagella associated protein 20)
Canis lupus familiaris (dog) : CFAP20 (cilia and flagella associated protein 20)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cfap20 (cilia and flagella associated protein 20)
Sus scrofa (pig) : CFAP20 (cilia and flagella associated protein 20)
Chlorocebus sabaeus (African green monkey) : CFAP20 (cilia and flagella associated protein 20)
Heterocephalus glaber (naked mole-rat) : Cfap20 (cilia and flagella associated protein 20)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01910,024,938 - 10,038,838 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1910,024,947 - 10,038,784 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01910,009,188 - 10,022,985 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,067,502 - 10,081,452 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11910,072,290 - 10,086,278 (+)NCBI
Celera199,500,482 - 9,514,062 (+)NCBICelera
Cytogenetic Map19p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cfap20
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308493
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.