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Gene: Rpain (RPA interacting protein) Rattus norvegicus
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Symbol: Rpain
Name: RPA interacting protein
Description: Predicted to have metal ion binding activity. Predicted to be involved in several processes, including DNA metabolic process; protein import into nucleus; and response to UV. Predicted to localize to the PML body; cytoplasm; and fibrillar center. Orthologous to human RPAIN (RPA interacting protein); INTERACTS WITH bisphenol A; vinclozolin; (-)-demecolcine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC287463; RAP interaction protein alpha; RGD1308492; RPA-interacting protein; similar to hypothetical protein MGC4189
Orthologs:
Homo sapiens (human) : RPAIN (RPA interacting protein)  HGNC  Alliance
Mus musculus (house mouse) : Rpain (RPA interacting protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rpain (RPA interacting protein)
Pan paniscus (bonobo/pygmy chimpanzee) : RPAIN (RPA interacting protein)
Canis lupus familiaris (dog) : RPAIN (RPA interacting protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rpain (RPA interacting protein)
Sus scrofa (pig) : RPAIN (RPA interacting protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01057,606,287 - 57,613,834 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1057,606,650 - 57,613,747 (+)Ensembl
Rnor_5.01057,351,523 - 57,359,044 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41057,874,557 - 57,881,526 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11057,887,893 - 57,895,355 (+)NCBI
Celera1054,838,418 - 54,845,387 (+)NCBICelera
Cytogenetic Map10q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rpain
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308492
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.