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Gene: Slc50a1 (solute carrier family 50 member 1) Rattus norvegicus
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Symbol: Slc50a1
Name: solute carrier family 50 member 1
Description: Predicted to have glucoside transmembrane transporter activity and sugar transmembrane transporter activity. Predicted to be involved in carbohydrate transport. Localizes to endomembrane system. Orthologous to human SLC50A1 (solute carrier family 50 member 1); INTERACTS WITH 17beta-estradiol; 3-chloropropane-1,2-diol; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC295245; RAG1-activating protein 1; Rag1ap1; recombination activating gene 1 activating protein 1; RGD1308478; similar to recombination activating gene 1 gene activation; solute carrier family 50 (sugar efflux transporter), member 1; solute carrier family 50 (sugar transporter), member 1; sugar transporter SWEET1
Orthologs:
Homo sapiens (human) : SLC50A1 (solute carrier family 50 member 1)  HGNC  Alliance
Mus musculus (house mouse) : Slc50a1 (solute carrier family 50 (sugar transporter), member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc50a1 (solute carrier family 50 member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC50A1 (solute carrier family 50 member 1)
Canis lupus familiaris (dog) : SLC50A1 (solute carrier family 50 member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc50a1 (solute carrier family 50 member 1)
Sus scrofa (pig) : SLC50A1 (solute carrier family 50 member 1)
Chlorocebus sabaeus (African green monkey) : SLC50A1 (solute carrier family 50 member 1)
Heterocephalus glaber (naked mole-rat) : Slc50a1 (solute carrier family 50 member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02188,585,118 - 188,587,498 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2188,585,118 - 188,587,498 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02207,998,463 - 208,000,843 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42181,440,905 - 181,443,285 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12181,391,251 - 181,393,782 (-)NCBI
Celera2168,620,201 - 168,622,581 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slc50a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308478
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.