Gene: Zfp579 (zinc finger protein 579) Rattus norvegicus
Analyze
Symbol:
Zfp579
Name:
zinc finger protein 579
RGD ID:
1308475
Description:
Orthologous to human ZNF579 (zinc finger protein 579); INTERACTS WITH amphetamine; bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Also known as:
LOC308339; Znf579
RGD Orthologs
Alliance Genes
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
ZNF579 (zinc finger protein 579)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, PhylomeDB, Treefam
Mus musculus (house mouse):
Zfp579 (zinc finger protein 579)
HGNC
Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):
Znf579 (zinc finger protein 579)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
ZNF579 (zinc finger protein 579)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
ZNF579 (zinc finger protein 579)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Znf579 (zinc finger protein 579)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
ZNF579 (zinc finger protein 579)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):
ZNF579 (zinc finger protein 579)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Znf579 (zinc finger protein 579)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
ZNF579 (zinc finger protein 579)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|TreeFam)
Mus musculus (house mouse):
Zfp579 (zinc finger protein 579)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|TreeFam)
Latest Assembly:
Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl mRatBN7.2 1 68,847,547 - 68,850,751 (+) NCBI Rnor_6.0 Ensembl 1 72,399,157 - 72,402,327 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_6.0 1 72,397,887 - 72,402,329 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_5.0 1 76,133,748 - 76,136,944 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 1 67,586,226 - 67,589,398 (+) NCBI RGSC3.4 rn4 RGSC3.4 RGSC_v3.1 1 67,664,393 - 67,667,506 (+) NCBI Celera 1 68,268,481 - 68,271,653 (-) NCBI Celera Cytogenetic Map 1 q12 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
References
Additional References at PubMed
Genomics
Comparative Map Data
Zfp579 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl mRatBN7.2 1 68,847,547 - 68,850,751 (+) NCBI Rnor_6.0 Ensembl 1 72,399,157 - 72,402,327 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_6.0 1 72,397,887 - 72,402,329 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_5.0 1 76,133,748 - 76,136,944 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 1 67,586,226 - 67,589,398 (+) NCBI RGSC3.4 rn4 RGSC3.4 RGSC_v3.1 1 67,664,393 - 67,667,506 (+) NCBI Celera 1 68,268,481 - 68,271,653 (-) NCBI Celera Cytogenetic Map 1 q12 NCBI
ZNF579 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38.p13 Ensembl 19 55,576,774 - 55,580,848 (-) Ensembl GRCh38 hg38 GRCh38 GRCh38 19 55,576,774 - 55,580,848 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh37 19 56,088,140 - 56,092,214 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 19 60,780,703 - 60,784,023 (-) NCBI NCBI36 hg18 NCBI36 Build 34 19 60,780,710 - 60,783,999 NCBI Celera 19 53,130,028 - 53,133,351 (-) NCBI Cytogenetic Map 19 q13.42 NCBI HuRef 19 52,399,884 - 52,403,207 (-) NCBI HuRef CHM1_1 19 56,082,565 - 56,085,885 (-) NCBI CHM1_1
Zfp579 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 7 4,995,851 - 4,999,100 (-) NCBI GRCm39 mm39 GRCm39 Ensembl 7 4,986,482 - 4,999,157 (-) Ensembl GRCm38 7 4,992,852 - 4,996,101 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 7 4,983,483 - 4,996,158 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 7 4,944,454 - 4,947,703 (-) NCBI GRCm37 mm9 NCBIm37 MGSCv36 7 4,595,939 - 4,598,427 (-) NCBI mm8 Celera 7 4,734,953 - 4,738,202 (-) NCBI Celera Cytogenetic Map 7 A1 NCBI
Znf579 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955567 761,535 - 762,351 (+) NCBI ChiLan1.0 ChiLan1.0
ZNF579 (Pan paniscus - bonobo/pygmy chimpanzee)
ZNF579 (Canis lupus familiaris - dog)
Znf579 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
ZNF579 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 6 59,701,608 - 59,706,760 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 6 59,703,269 - 59,706,444 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 6 54,490,813 - 54,494,022 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
ZNF579 (Chlorocebus sabaeus - African green monkey)
Vervet Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 6 48,164,925 - 48,168,822 (-) NCBI ChlSab1.1 Ensembl 6 48,165,819 - 48,167,513 (-) Ensembl
Znf579 (Heterocephalus glaber - naked mole-rat)
Molerat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HetGla 1.0 NW_004624832 1,819,302 - 1,823,105 (+) NCBI
Position Markers
RH131533
Rat Assembly Chr Position (strand) Source JBrowse Rnor_6.0 1 72,401,999 - 72,402,180 NCBI Rnor6.0 Rnor_5.0 1 76,133,897 - 76,134,078 UniSTS Rnor5.0 RGSC_v3.4 1 67,589,068 - 67,589,249 UniSTS RGSC3.4 Celera 1 68,268,630 - 68,268,811 UniSTS Cytogenetic Map 1 q12 UniSTS
QTLs in Region (Rnor_6.0)
1554320 Bmd1 Bone mineral density QTL 1 12.2 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 1 254393 86904217 Rat 631688 Hcas2 Hepatocarcinoma susceptibility QTL 2 3 0.0001 liver integrity trait (VT:0010547) liver tumorous lesion number (CMO:0001068) 1 5655769 122614963 Rat 4889451 Eae29 Experimental allergic encephalomyelitis QTL 29 5.51 nervous system integrity trait (VT:0010566) experimental autoimmune encephalomyelitis severity score (CMO:0001419) 1 5655772 85706974 Rat 1300167 Hrtrt2 Heart rate QTL 2 4.35 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 1 11314489 75844121 Rat 2313062 Bmd73 Bone mineral density QTL 73 3.9 0.0001 tibia mineral mass (VT:1000283) cortical volumetric bone mineral density (CMO:0001730) 1 11314489 83657083 Rat 2313065 Bss67 Bone structure and strength QTL 67 3.1 0.0001 tibia area (VT:1000281) tibia total energy absorbed before break (CMO:0001736) 1 11314489 83657083 Rat 2313069 Bss68 Bone structure and strength QTL 68 2.9 0.0001 tibia size trait (VT:0100001) tibia total energy absorbed before break (CMO:0001736) 1 11314489 83657083 Rat 2313075 Bss66 Bone structure and strength QTL 66 3.4 0.0001 tibia length (VT:0004357) tibia length (CMO:0000450) 1 11314489 83657083 Rat 2313077 Bss69 Bone structure and strength QTL 69 3.5 0.0001 tibia strength trait (VT:1000284) bone polar moment of inertia (CMO:0001558) 1 11314489 83657083 Rat 2313092 Bmd72 Bone mineral density QTL 72 2.5 0.0001 tibia mineral mass (VT:1000283) total volumetric bone mineral density (CMO:0001728) 1 11314489 83657083 Rat 2313097 Bss70 Bone structure and strength QTL 70 3.5 0.0001 tibia strength trait (VT:1000284) tibia total energy absorbed before break (CMO:0001736) 1 11314489 83657083 Rat 631495 Bp96 Blood pressure QTL 96 4.52 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 23406428 108057505 Rat 1358192 Ept13 Estrogen-induced pituitary tumorigenesis QTL 13 3.4 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) 1 24297799 78748000 Rat 1358359 Sradr1 Stress Responsive Adrenal Weight QTL 1 4.74 adrenal gland mass (VT:0010420) both adrenal glands wet weight (CMO:0000164) 1 25951907 130917265 Rat 1331785 Rf27 Renal function QTL 27 4.643 urine sodium amount (VT:0006274) urine sodium level (CMO:0000129) 1 31489454 79689689 Rat 1354643 Foco2 Food consumption QTL 2 7.17 0.0001 eating behavior trait (VT:0001431) food intake rate (CMO:0000427) 1 34449112 79449112 Rat 1354599 Bw29 Body weight QTL 29 3.46 0.001 body mass (VT:0001259) body weight (CMO:0000012) 1 34449112 79449112 Rat 70225 Bp58 Blood pressure QTL 58 3.3 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 34993530 173445086 Rat 1300172 Bp172 Blood pressure QTL 172 3.56 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 1 35377508 94364229 Rat 10059597 Bp377 Blood pressure QTL 377 3.42 0.025 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 35377692 217372257 Rat 9589820 Insglur3 Insulin/glucose ratio QTL 3 10.75 0.001 blood insulin amount (VT:0001560) calculated plasma insulin level (CMO:0002170) 1 35854167 80854167 Rat 8552900 Pigfal1 Plasma insulin-like growth factor 1 level QTL 1 7.4 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 1 35854167 80854167 Rat 8552948 Pigfal11 Plasma insulin-like growth factor 1 level QTL 11 4.7 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 1 35854167 80854167 Rat 1331732 Srn4 Serum renin concentration QTL 4 4.467 renin activity (VT:0005581) plasma renin activity level (CMO:0000116) 1 36033165 79689689 Rat 1331792 Rf29 Renal function QTL 29 4.589 urine potassium amount (VT:0010539) urine potassium level (CMO:0000128) 1 36033165 79689689 Rat 2302059 Pia36 Pristane induced arthritis QTL 36 3.8 0.001 blood immunoglobulin amount (VT:0002460) serum immunoglobulin G1 level (CMO:0002115) 1 41907249 86907249 Rat 2313051 Bss57 Bone structure and strength QTL 57 3.7 0.0001 tibia strength trait (VT:1000284) bone polar moment of inertia (CMO:0001558) 1 43579208 126240667 Rat 2313059 Bss55 Bone structure and strength QTL 55 3.2 0.0001 tibia size trait (VT:0100001) tibia midshaft cross-sectional area (CMO:0001717) 1 43579208 126240667 Rat 2313072 Bss53 Bone structure and strength QTL 53 4.3 0.0001 tibia length (VT:0004357) tibia length (CMO:0000450) 1 43579208 126240667 Rat 2313078 Bss54 Bone structure and strength QTL 54 3.5 0.0001 tibia area (VT:1000281) tibia midshaft cross-sectional area (CMO:0001717) 1 43579208 126240667 Rat 2313094 Bss58 Bone structure and strength QTL 58 3.7 0.0001 tibia strength trait (VT:1000284) tibia total energy absorbed before break (CMO:0001736) 1 43579208 126240667 Rat 2313098 Bmd70 Bone mineral density QTL 70 3.6 0.0001 tibia mineral mass (VT:1000283) cortical volumetric bone mineral density (CMO:0001730) 1 43579208 126240667 Rat 2313099 Bss56 Bone structure and strength QTL 56 2.4 0.0001 tibia size trait (VT:0100001) tibia midshaft endosteal cross-sectional area (CMO:0001716) 1 43579208 126240667 Rat 1331778 Rf28 Renal function QTL 28 4.66 urine potassium amount (VT:0010539) urine potassium excretion rate (CMO:0000761) 1 46113461 79689689 Rat 2313402 Anxrr24 Anxiety related response QTL 24 aggression-related behavior trait (VT:0015014) tameness/aggressiveness composite score (CMO:0002136) 1 49147799 156446783 Rat 4889962 Bss94 Bone structure and strength QTL 94 3.8 tibia area (VT:1000281) tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722) 1 49547328 83657083 Rat 1578649 Bmd8 Bone mineral density QTL 8 4.9 femur mineral mass (VT:0010011) trabecular volumetric bone mineral density (CMO:0001729) 1 49578577 94578577 Rat 1578654 Bss10 Bone structure and strength QTL 10 4 femur morphology trait (VT:0000559) femoral neck cortical cross-sectional area (CMO:0001702) 1 49578577 169852184 Rat 634314 Niddm44 Non-insulin dependent diabetes mellitus QTL 44 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 1 49578693 217054291 Rat 6903308 Scl36 Serum cholesterol QTL 36 2 0.0125 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 1 50522714 94225616 Rat 4889919 Bss86 Bone structure and strength QTL 86 4.1 tibia area (VT:1000281) tibia midshaft total cross-sectional area (CMO:0001715) 1 53851348 83657083 Rat 4889929 Bss87 Bone structure and strength QTL 87 6.7 tibia area (VT:1000281) tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722) 1 53851348 83657083 Rat 61342 Bp27 Blood pressure QTL 27 3.4 0.0006 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 57761301 104391981 Rat 2300164 Bmd44 Bone mineral density QTL 44 5.4 0.0001 lumbar vertebra mineral mass (VT:0010511) volumetric bone mineral density (CMO:0001553) 1 58209327 103209327 Rat 2298545 Neuinf8 Neuroinflammation QTL 8 4.6 nervous system integrity trait (VT:0010566) spinal cord beta-2 microglobulin mRNA level (CMO:0002125) 1 58354072 161711996 Rat 7421628 Bp361 Blood pressure QTL 361 0.001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 64588516 125875986 Rat 1300121 Hrtrt1 Heart rate QTL 1 3.7 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 1 66113339 122614963 Rat 631512 Scl6 Serum cholesterol level QTL 6 9.6 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 1 67227683 94201552 Rat