Etnk1 (ethanolamine kinase 1) - Rat Genome Database

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Gene: Etnk1 (ethanolamine kinase 1) Rattus norvegicus
Analyze
Symbol: Etnk1
Name: ethanolamine kinase 1
RGD ID: 1308204
Description: Predicted to enable ethanolamine kinase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to be active in cytoplasm. Orthologous to human ETNK1 (ethanolamine kinase 1); PARTICIPATES IN glycerophospholipid metabolic pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC312828
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84177,857,001 - 177,901,278 (+)NCBIGRCr8
mRatBN7.24176,126,056 - 176,170,325 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4176,126,180 - 176,193,770 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4182,421,196 - 182,465,330 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04178,205,471 - 178,249,606 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04176,826,054 - 176,870,189 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04177,402,904 - 177,447,047 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4177,402,904 - 177,447,028 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04241,606,529 - 241,650,672 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44181,060,600 - 181,104,724 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14181,305,698 - 181,375,929 (+)NCBI
Celera4164,656,894 - 164,701,064 (+)NCBICelera
Cytogenetic Map4q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,6-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
acetamide  (EXP)
acrylamide  (EXP)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
amphetamine  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
azoxystrobin  (ISO)
benzalkonium chloride  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
C60 fullerene  (EXP)
cadmium dichloride  (EXP)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
choline  (ISO)
clofibric acid  (EXP)
cobalt dichloride  (EXP)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
deguelin  (ISO)
deoxynivalenol  (ISO)
Dibutyl phosphate  (ISO)
dorsomorphin  (ISO)
doxifluridine  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
ethanol  (ISO)
folic acid  (ISO)
genistein  (ISO)
gentamycin  (EXP)
isotretinoin  (ISO)
L-methionine  (ISO)
levonorgestrel  (ISO)
mercury dibromide  (ISO)
methapyrilene  (EXP)
methylmercury chloride  (ISO)
miconazole  (ISO)
Monobutylphthalate  (EXP)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-nitrosodiethylamine  (EXP)
nefazodone  (EXP)
nickel atom  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
rac-lactic acid  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
testosterone undecanoate  (ISO)
thifluzamide  (ISO)
thimerosal  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
tungsten  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11044454   PMID:12477932   PMID:19103603   PMID:19946888  


Genomics

Comparative Map Data
Etnk1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84177,857,001 - 177,901,278 (+)NCBIGRCr8
mRatBN7.24176,126,056 - 176,170,325 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4176,126,180 - 176,193,770 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4182,421,196 - 182,465,330 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04178,205,471 - 178,249,606 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04176,826,054 - 176,870,189 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04177,402,904 - 177,447,047 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4177,402,904 - 177,447,028 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04241,606,529 - 241,650,672 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44181,060,600 - 181,104,724 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14181,305,698 - 181,375,929 (+)NCBI
Celera4164,656,894 - 164,701,064 (+)NCBICelera
Cytogenetic Map4q44NCBI
ETNK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381222,625,171 - 22,690,665 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1222,625,075 - 22,690,665 (+)EnsemblGRCh38hg38GRCh38
GRCh371222,778,105 - 22,843,599 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361222,669,343 - 22,734,875 (+)NCBINCBI36Build 36hg18NCBI36
Build 341222,669,275 - 22,729,910NCBI
Celera1227,925,902 - 27,991,433 (+)NCBICelera
Cytogenetic Map12p12.1NCBI
HuRef1222,544,416 - 22,609,945 (+)NCBIHuRef
CHM1_11222,743,111 - 22,808,624 (+)NCBICHM1_1
T2T-CHM13v2.01222,496,636 - 22,562,113 (+)NCBIT2T-CHM13v2.0
Etnk1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396143,112,592 - 143,154,272 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6143,112,947 - 143,178,033 (+)EnsemblGRCm39 Ensembl
GRCm386143,166,866 - 143,208,546 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6143,167,221 - 143,232,307 (+)EnsemblGRCm38mm10GRCm38
MGSCv376143,115,750 - 143,157,066 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366143,113,385 - 143,165,768 (+)NCBIMGSCv36mm8
Celera6146,223,422 - 146,264,838 (+)NCBICelera
Cytogenetic Map6G3NCBI
cM Map675.41NCBI
Etnk1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541318,036,646 - 18,089,370 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541318,036,646 - 18,094,875 (+)NCBIChiLan1.0ChiLan1.0
ETNK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21074,127,774 - 74,195,009 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11274,124,173 - 74,191,411 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01263,623,723 - 63,690,306 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11266,231,860 - 66,297,223 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1266,237,566 - 66,297,223 (-)Ensemblpanpan1.1panPan2
ETNK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12724,561,708 - 24,624,794 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2724,567,318 - 24,624,797 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2721,737,309 - 21,800,235 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02724,771,667 - 24,834,600 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2724,771,674 - 24,834,755 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12724,575,789 - 24,638,718 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02724,600,684 - 24,663,605 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02721,908,620 - 21,971,582 (+)NCBIUU_Cfam_GSD_1.0
Etnk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494586,417,239 - 86,482,994 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365484,345,021 - 4,405,879 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365484,340,632 - 4,405,880 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ETNK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl550,914,814 - 50,970,697 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1550,914,808 - 50,970,748 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ETNK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11122,442,523 - 22,506,200 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1122,442,649 - 22,500,510 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606912,638,908 - 12,703,273 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Etnk1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475216,139,202 - 16,196,389 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475216,134,295 - 16,196,406 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Etnk1
90 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:689
Count of miRNA genes:279
Interacting mature miRNAs:378
Transcripts:ENSRNOT00000020042
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
2303623Vencon2Ventilatory control QTL 23.8respiration trait (VT:0001943)minute ventilation (CMO:0000132)4135204660180204660Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4135699135180699135Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
10053718Scort25Serum corticosterone level QTL 252.150.0097blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)4155561574182687754Rat
1549827Scl46Serum cholesterol level QTL 463.5blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)4132396220177396220Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4137755016181392681Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4145568712182687754Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1300109Rf13Renal function QTL 133.91renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)4157710145182687754Rat

Markers in Region
RH134034  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24176,167,549 - 176,167,732 (+)MAPPERmRatBN7.2
Rnor_6.04177,444,272 - 177,444,454NCBIRnor6.0
Rnor_5.04241,647,897 - 241,648,079UniSTSRnor5.0
RGSC_v3.44181,101,968 - 181,102,150UniSTSRGSC3.4
Celera4164,698,308 - 164,698,490UniSTS
RH 3.4 Map41057.9UniSTS
Cytogenetic Map4q44UniSTS
RH129552  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24176,169,953 - 176,170,141 (+)MAPPERmRatBN7.2
Rnor_6.04177,446,676 - 177,446,863NCBIRnor6.0
Rnor_5.04241,650,301 - 241,650,488UniSTSRnor5.0
RGSC_v3.44181,104,372 - 181,104,559UniSTSRGSC3.4
Celera4164,700,712 - 164,700,899UniSTS
RH 3.4 Map41047.8UniSTS
Cytogenetic Map4q44UniSTS
RH143348  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24176,140,023 - 176,140,125 (+)MAPPERmRatBN7.2
Rnor_6.04177,416,747 - 177,416,848NCBIRnor6.0
Rnor_5.04241,620,372 - 241,620,473UniSTSRnor5.0
RGSC_v3.44181,074,443 - 181,074,544UniSTSRGSC3.4
Celera4164,670,737 - 164,670,838UniSTS
RH 3.4 Map41048.1UniSTS
Cytogenetic Map4q44UniSTS
AI007910  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24176,166,869 - 176,167,039 (+)MAPPERmRatBN7.2
Rnor_6.04177,443,592 - 177,443,761NCBIRnor6.0
Rnor_5.04241,647,217 - 241,647,386UniSTSRnor5.0
RGSC_v3.44181,101,288 - 181,101,457UniSTSRGSC3.4
Celera4164,697,628 - 164,697,797UniSTS
RH 3.4 Map41048.1UniSTS
Cytogenetic Map4q44UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000020042   ⟹   ENSRNOP00000020042
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4176,126,180 - 176,170,306 (+)Ensembl
Rnor_6.0 Ensembl4177,402,904 - 177,447,028 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097949   ⟹   ENSRNOP00000091488
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4176,126,180 - 176,193,770 (+)Ensembl
RefSeq Acc Id: NM_001107894   ⟹   NP_001101364
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84177,857,143 - 177,901,278 (+)NCBI
mRatBN7.24176,126,188 - 176,170,325 (+)NCBI
Rnor_6.04177,402,904 - 177,447,028 (+)NCBI
Rnor_5.04241,606,529 - 241,650,672 (+)NCBI
RGSC_v3.44181,060,600 - 181,104,724 (+)RGD
Celera4164,656,894 - 164,701,064 (+)RGD
Sequence:
RefSeq Acc Id: XM_039107705   ⟹   XP_038963633
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84177,857,001 - 177,888,429 (+)NCBI
mRatBN7.24176,126,056 - 176,156,808 (+)NCBI
RefSeq Acc Id: XR_005503240
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84177,857,001 - 177,888,429 (+)NCBI
mRatBN7.24176,126,056 - 176,156,808 (+)NCBI
RefSeq Acc Id: XR_010065649
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84177,857,001 - 177,888,429 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001101364 (Get FASTA)   NCBI Sequence Viewer  
  XP_038963633 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM01468 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000020042.4
  ENSRNOP00000091488.1
  ENSRNOP00000102359
RefSeq Acc Id: NP_001101364   ⟸   NM_001107894
- UniProtKB: D3ZXB8 (UniProtKB/TrEMBL),   A6IMX1 (UniProtKB/TrEMBL),   A0A8I6AFB2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000020042   ⟸   ENSRNOT00000020042
RefSeq Acc Id: XP_038963633   ⟸   XM_039107705
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000091488   ⟸   ENSRNOT00000097949

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZXB8-F1-model_v2 AlphaFold D3ZXB8 1-363 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693494
Promoter ID:EPDNEW_R4018
Type:initiation region
Name:Etnk1_1
Description:ethanolamine kinase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.04177,402,915 - 177,402,975EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308204 AgrOrtholog
BioCyc Gene G2FUF-42484 BioCyc
BioCyc Pathway PWY-7782 [plasmalogen biosynthesis] BioCyc
  PWY4FS-6 [phosphatidylethanolamine biosynthesis II] BioCyc
BioCyc Pathway Image PWY-7782 BioCyc
  PWY4FS-6 BioCyc
Ensembl Genes ENSRNOG00000014856 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000020042.5 UniProtKB/TrEMBL
  ENSRNOT00000097949.1 UniProtKB/TrEMBL
  ENSRNOT00000163938 ENTREZGENE
Gene3D-CATH 3.90.1200.10 UniProtKB/TrEMBL
  Phosphorylase Kinase, domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom UniProtKB/TrEMBL
KEGG Report rno:312828 UniProtKB/TrEMBL
NCBI Gene 312828 ENTREZGENE
PANTHER CHOLINE/ETHANOALAMINE KINASE UniProtKB/TrEMBL
  ETHANOLAMINE KINASE 1 UniProtKB/TrEMBL
Pfam Choline_kinase UniProtKB/TrEMBL
PhenoGen Etnk1 PhenoGen
RatGTEx ENSRNOG00000014856 RatGTEx
Superfamily-SCOP Kinase_like UniProtKB/TrEMBL
UniProt A0A8I6AFB2 ENTREZGENE, UniProtKB/TrEMBL
  A6IMX1 ENTREZGENE, UniProtKB/TrEMBL
  D3ZXB8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Etnk1  ethanolamine kinase 1   Etnk1_predicted  ethanolamine kinase 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Etnk1_predicted  ethanolamine kinase 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED