Plac8 (placenta associated 8) - Rat Genome Database

Name: Plac8
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Plac8 (placenta associated 8) Rattus norvegicus

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Symbol:

Plac8

Name:

placenta associated 8

Description:

Predicted to have chromatin binding activity. Predicted to be involved in several processes, including brown fat cell differentiation; negative regulation of growth; and positive regulation of cold-induced thermogenesis. Biomarker of glucose intolerance. Orthologous to human PLAC8 (placenta associated 8); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

LOC360914; placenta-specific 8; placenta-specific gene 8 protein

Orthologs:

Homo sapiens (human) : PLAC8 (placenta associated 8) HGNC Alliance
Mus musculus (house mouse) : Plac8 (placenta-specific 8) MGI Alliance
Chinchilla lanigera (long-tailed chinchilla) : Plac8 (placenta associated 8)
Pan paniscus (bonobo/pygmy chimpanzee) : PLAC8 (placenta associated 8)
Canis lupus familiaris (dog) : PLAC8B (placenta specific 8 B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Plac8 (placenta associated 8)
Sus scrofa (pig) : PLAC8 (placenta associated 8)

more info ...

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PLAC8 (placenta associated 8)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Plac8 (placenta-specific 8)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Plac8 (placenta associated 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PLAC8 (placenta associated 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PLAC8B (placenta specific 8 B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Plac8 (placenta associated 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PLAC8 (placenta associated 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	PLAC8 (placenta associated 8)	Alliance	DIOPT (Ensembl Compara, HGNC, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, TreeFam)
Mus musculus (house mouse):	Plac8 (placenta-specific 8)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoInspector, PANTHER, PhylomeDB, TreeFam)
Danio rerio (zebrafish):	plac8.2 (placenta-specific 8, tandem duplicate 2)	Alliance	DIOPT (Ensembl Compara, Hieranoid, OrthoFinder, PANTHER, PhylomeDB, TreeFam)
Danio rerio (zebrafish):	plac8.1 (placenta-specific 8, tandem duplicate 1)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, TreeFam)

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	14	10,692,799 - 10,714,556 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	14	10,640,286 - 10,661,811 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	10,302,667 - 10,325,559 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	14	10,273,445 - 10,325,545 (+)	NCBI
Celera	14	9,161,291 - 9,183,206 (+)	NCBI		Celera
Cytogenetic Map	14	p22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation (Toggle Annotation Detail/Summary View)

Disease Annotations

Gene-Chemical Interaction Annotations

Gene Ontology Annotations

References - curated

References - uncurated

Genomics

Candidate Gene Status

Comparative Map Data

Position Markers

QTLs in Region (Rnor_6.0)

miRNA Target Status

Sequence

Nucleotide Sequences

Protein Sequences

Transcriptome

Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links

Nomenclature History

More on Plac8
	Alliance Gene
	NCBI Gene
	Ensembl Gene
	JBrowse: rn5 rn6
	NCBI Genome Data Viewer

RGD Object Information
RGD ID:	1308102
Created:	2005-01-12
Species:	Rattus norvegicus
Last Modified:	2019-08-20
Status:	ACTIVE

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.

Functional Annotation unavailable	Annotation Distribution unavailable	Genomic Variants unavailble Genomic Variants unavailable
Functional Annotation	Annotation Distribution	Genomic Variants

Protein-Protein Interactions unavailable	Genome Viewer unavailable	Damaging Variants unavailble Damaging Variants unavailable
Protein-Protein Interactions	Genome Viewer	Damaging Variants

Annotation Comparison unavailable	OLGA unavailable
Annotation Comparison	OLGA	Excel (Download)

Gene Enrichment unavailable	Ortholog Finder unavailable
Gene Enrichment	Ortholog Finder

RGD Manual Annotations

Imported Annotations - CTD