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Molecular Function
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Analyze GeneStrainQTL List |
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Molecular Function
Gene-Chemical Interaction Annotations
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Gene Ontology AnnotationsBiological Process
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Molecular Function
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References - curated| 1. | Horiba N, etal., Kidney Int 2004 Jul;66(1):29-45. |
| 2. | RGD automated data pipeline |
| 3. | RGD automated import pipeline for gene-chemical interactions |
References - uncurated| PubMed | 12477932 |
Genomics
QTLs in Region (Rnor_6.0)| The following QTLs overlap with this region. |  | Full Report | | CSV | | TAB | | Printer | | Gviewer |
Expression
RNA-SEQ ExpressionHigh: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM
| testis | heart | brain | ovary | uterus | skeletal muscle tissue | colon | gastrocnemius | forebrain | hindbrain | lung | spleen | liver | kidney | adrenal gland | thymus | |
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| High | ||||||||||||||||
| Medium | 4 | 8 | 4 | 8 | 8 | 13 | 12 | 6 | 8 | |||||||
| Low | 17 | 43 | 15 | 15 | 2 | 3 | 8 | 26 | 25 | 3 | 3 | 28 | 23 | 2 | ||
| Below cutoff | 1 | 1 |
View RNA-SEQ Expression Data
Sequence
Nucleotide Sequences| RefSeq Transcripts | NM_001013098 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| XM_002726707 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017594092 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | AABR07064805 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| AABR07064806 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AABR07064807 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AAHX01045033 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AAHX01045034 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AAHX01045037 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AB108671 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| BC104713 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Reference Sequences
| RefSeq Acc Id: | NM_001013098 ⟹ NP_001013116 | ||||||||||||||||||||||||
| RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||
| Type: | CODING | ||||||||||||||||||||||||
| Position: |
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| Sequence: |
ACCTGGCACTCCTCACTTGCCTGCACCTGGGTGGAGCCAGAGCCCAGGGCTACATATTTTAGCChide sequence |
| RefSeq Acc Id: | XM_002726707 ⟹ XP_002726753 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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| Sequence: |
AGTACCTAGGAGGGGCAGCACTTGACAGAGAGCACATGGCACTCCTCACTTGCCTGCACCTGGGhide sequence |
| RefSeq Acc Id: | XM_017594092 ⟹ XP_017449581 | |||||||||
| RefSeq Status: | ||||||||||
| Type: | CODING | |||||||||
| Position: |
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| Sequence: |
AGCCCTGGCACCAGCAGGCTCCAGAGCTGTAGCTGTCTTTTCCTAGCTATGATGGGCTTTGAGThide sequence |
Protein Sequences| Protein RefSeqs | NP_001013116 | (Get FASTA) | NCBI Sequence Viewer |
| XP_002726753 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017449581 | (Get FASTA) | NCBI Sequence Viewer | |
| GenBank Protein | AAI04714 | (Get FASTA) | NCBI Sequence Viewer |
| BAD23896 | (Get FASTA) | NCBI Sequence Viewer |
Reference Sequences
| RefSeq Acc Id: | NP_001013116 ⟸ NM_001013098 |
| - UniProtKB: | Q6I7R1 (UniProtKB/TrEMBL) |
| - Sequence: |
MMGFEFWMLALCALLLLVLGLLSFLWLDSDLTLLRAAWMGQCPEQALADKVVWITGASSGIGEEhide sequence |
| RefSeq Acc Id: | XP_002726753 ⟸ XM_002726707 |
| - Peptide Label: | isoform X2 |
| - Sequence: |
MGFEFWMLALCALLLLVLGLLSFLWLDSDLTLLRAAWMGQCPEQALADKVVWITGASSGIGEELhide sequence |
| RefSeq Acc Id: | XP_017449581 ⟸ XM_017594092 |
| - Peptide Label: | isoform X1 |
| - UniProtKB: | M0R4N4 (UniProtKB/TrEMBL) |
| - Sequence: |
MMGFEFWMLALCALLLLVLGLLSFLWLDSDLTLLRAAWMGQCPEQALADKVVWITGASSGIGEEhide sequence |
TranscriptomePromoters| RGD ID: | 13694661 | |||||||||
| Promoter ID: | EPDNEW_R5182 | |||||||||
| Type: | multiple initiation site | |||||||||
| Name: | Dhrs7l1_1 | |||||||||
| Description: | dehydrogenase/reductase member 7-like 1 | |||||||||
| SO ACC ID: | SO:0000170 | |||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | |||||||||
| Experiment Methods: | Single-end sequencing. | |||||||||
| Position: |
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Strain Variation
Strain Sequence Variants (Rnor 6.0)
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Damaging VariantsAssembly: Rnor_5.0
| Chromosome | Start Pos | End Pos | Reference Nucleotide | Variant Nucleotide | Variant Type | Strain |
| 6 | 104938375 | 104938376 | C | T | snv | HTX/Kyo (KyushuU) |
Additional Information
External Database Links| Database | Acc Id | Source(s) |
| AGR Gene | RGD:1308036 | AgrOrtholog |
| Ensembl Genes | ENSRNOG00000025648 | ENTREZGENE, UniProtKB/TrEMBL |
| Ensembl Protein | ENSRNOP00000036519 | ENTREZGENE, UniProtKB/TrEMBL |
| ENSRNOP00000064322 | ENTREZGENE, UniProtKB/TrEMBL | |
| Ensembl Transcript | ENSRNOT00000034289 | ENTREZGENE, UniProtKB/TrEMBL |
| ENSRNOT00000074990 | ENTREZGENE, UniProtKB/TrEMBL | |
| IMAGE_CLONE | IMAGE:7370181 | IMAGE-MGC_LOAD |
| InterPro | Glc/ribitol_DH | UniProtKB/TrEMBL |
| NAD(P)-bd_dom_sf | UniProtKB/TrEMBL | |
| Sc_DH/Rdtase_CS | UniProtKB/TrEMBL | |
| KEGG Report | rno:299131 | UniProtKB/TrEMBL |
| MGC_CLONE | MGC:124901 | IMAGE-MGC_LOAD |
| NCBI Gene | 299131 | ENTREZGENE |
| Pfam | adh_short | UniProtKB/TrEMBL |
| PhenoGen | Dhrs7l1 | PhenoGen |
| PRINTS | GDHRDH | UniProtKB/TrEMBL |
| SDRFAMILY | UniProtKB/TrEMBL | |
| PROSITE | ADH_SHORT | UniProtKB/TrEMBL |
| Superfamily-SCOP | SSF51735 | UniProtKB/TrEMBL |
| UniGene | Rn.119024 | ENTREZGENE |
| UniProt | M0R4N4 | ENTREZGENE, UniProtKB/TrEMBL |
| Q6I7R1 | ENTREZGENE, UniProtKB/TrEMBL |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2013-11-25 | Dhrs7l1 | dehydrogenase/reductase (SDR family) member 7-like 1 | Dhrs7 | dehydrogenase/reductase (SDR family) member 7 | Name and Symbol changed | 629549 | APPROVED |
| 2005-12-06 | Dhrs7 | dehydrogenase/reductase (SDR family) member 7 | Dhrs7_predicted | dehydrogenase/reductase (SDR family) member 7 (predicted) | Symbol and Name updated | 1559027 | APPROVED |
| 2005-01-12 | Dhrs7_predicted | dehydrogenase/reductase (SDR family) member 7 (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |
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| More on Dhrs7l1 | |
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Alliance Gene |
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NCBI Gene |
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Ensembl Gene |
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JBrowse: rn5 rn6 |
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NCBI Genome Data Viewer |
| RGD Object Information | |
| RGD ID: | 1308036 |
| Created: | 2005-01-12 |
| Species: | Rattus norvegicus |
| Last Modified: | 2019-11-27 |
| Status: | ACTIVE |
