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Gene: Cpne5 (copine 5) Rattus norvegicus
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Symbol: Cpne5
Name: copine 5
Description: Predicted to have calcium-dependent phospholipid binding activity. Predicted to be involved in cellular response to calcium ion and positive regulation of dendrite extension. Predicted to localize to the neuron projection; neuronal cell body; and plasma membrane. Orthologous to human CPNE5 (copine 5); INTERACTS WITH benzo[a]pyrene; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: copine 5 protein; copine V; copine-5; LOC309650
Orthologs:
Homo sapiens (human) : CPNE5 (copine 5)  HGNC  Alliance
Mus musculus (house mouse) : Cpne5 (copine V)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cpne5 (copine 5)
Pan paniscus (bonobo/pygmy chimpanzee) : CPNE5 (copine 5)
Canis lupus familiaris (dog) : CPNE5 (copine 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cpne5 (copine 5)
Sus scrofa (pig) : CPNE5 (copine 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0206,419,033 - 6,500,843 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0208,664,244 - 8,745,448 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4207,453,643 - 7,535,366 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1207,455,846 - 7,535,503 (-)NCBI
Celera208,756,578 - 8,838,868 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cpne5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308021
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.