Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Sync (syncoilin, intermediate filament protein) Rattus norvegicus
Analyze
Symbol: Sync
Name: syncoilin, intermediate filament protein
RGD ID: 1307970
Description: Predicted to be involved in intermediate filament-based process. Predicted to localize to several cellular components, including Z disc; neuromuscular junction; and sarcolemma. Orthologous to human SYNC (syncoilin, intermediate filament protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2-methoxyethanol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362606; syncoilin
Orthologs:
Homo sapiens (human) : SYNC (syncoilin, intermediate filament protein)  HGNC  Alliance
Mus musculus (house mouse) : Sync (syncoilin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sync (syncoilin, intermediate filament protein)
Pan paniscus (bonobo/pygmy chimpanzee) : SYNC (syncoilin, intermediate filament protein)
Canis lupus familiaris (dog) : SYNC (syncoilin, intermediate filament protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sync (syncoilin, intermediate filament protein)
Sus scrofa (pig) : SYNC (syncoilin, intermediate filament protein)
Chlorocebus sabaeus (African green monkey) : SYNC (syncoilin, intermediate filament protein)
Heterocephalus glaber (naked mole-rat) : Sync (syncoilin, intermediate filament protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05147,476,136 - 147,500,193 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5147,476,221 - 147,498,902 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05151,208,684 - 151,232,433 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45148,448,944 - 148,471,419 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15148,461,258 - 148,481,221 (+)NCBI
Celera5140,111,206 - 140,133,379 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sync
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307970
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.