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Gene: Aff1 (AF4/FMR2 family, member 1) Rattus norvegicus
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Symbol: Aff1
Name: AF4/FMR2 family, member 1
Description: Predicted to have DNA-binding transcription factor activity and double-stranded DNA binding activity. Predicted to be involved in positive regulation of transcription, DNA-templated. Predicted to localize to the ELL-EAF complex. Orthologous to human AFF1 (AF4/FMR2 family member 1); PARTICIPATES IN RNA polymerase II transcription elongation pathway; INTERACTS WITH atrazine; bisphenol A; doxorubicin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AF4/FMR2 family member 1; LOC305152; Mllt2; myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 2
Orthologs:
Homo sapiens (human) : AFF1 (AF4/FMR2 family member 1)  HGNC  Alliance
Mus musculus (house mouse) : Aff1 (AF4/FMR2 family, member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Aff1 (AF4/FMR2 family member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : AFF1 (AF4/FMR2 family member 1)
Canis lupus familiaris (dog) : AFF1 (AF4/FMR2 family member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Aff1 (AF4/FMR2 family member 1)
Sus scrofa (pig) : AFF1 (AF4/FMR2 family member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0147,222,883 - 7,384,916 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl147,226,586 - 7,384,876 (-)Ensembl
Rnor_5.0147,212,805 - 7,353,561 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4147,015,191 - 7,114,671 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1147,004,997 - 7,155,484 (-)NCBI
Celera146,003,631 - 6,102,711 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Aff1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307940
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.