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Gene: Patl2 (PAT1 homolog 2) Rattus norvegicus
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Symbol: Patl2
Name: PAT1 homolog 2
Description: Predicted to have RNA binding activity. Predicted to be involved in cytoplasmic mRNA processing body assembly; deadenylation-dependent decapping of nuclear-transcribed mRNA; and negative regulation of cytoplasmic mRNA processing body assembly. Predicted to localize to the P-body and nucleus. Orthologous to human PATL2 (PAT1 homolog 2); INTERACTS WITH (+)-catechin (ortholog); aflatoxin B1 (ortholog); benzo[a]pyrene (ortholog).
Type: gene
RefSeq Status: MODEL
Also known as: LOC366176; protein associated with topoisomerase II homolog 2 (yeast); RGD1307887; similar to RIKEN cDNA 4930424G05
Orthologs:
Homo sapiens (human) : PATL2 (PAT1 homolog 2)  HGNC  Alliance
Mus musculus (house mouse) : Patl2 (protein associated with topoisomerase II homolog 2 (yeast))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Patl2 (PAT1 homolog 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PATL2 (PAT1 homolog 2)
Canis lupus familiaris (dog) : PATL2 (PAT1 homolog 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Patl2 (PAT1 homolog 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03114,065,814 - 114,075,404 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03120,606,026 - 120,615,073 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43108,906,763 - 108,915,422 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13108,813,002 - 108,825,167 (-)NCBI
Celera3107,972,519 - 107,982,105 (-)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Patl2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307887
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.