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Gene: Snx20 (sorting nexin 20) Rattus norvegicus
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Symbol: Snx20
Name: sorting nexin 20
Description: Predicted to have phosphatidylinositol-3-phosphate binding activity and phosphatidylinositol-4,5-bisphosphate binding activity. Predicted to be involved in protein transport. Predicted to localize to the early endosome membrane and nucleoplasm. Orthologous to human SNX20 (sorting nexin 20); INTERACTS WITH aflatoxin B1; bisphenol A; furan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC307742; MGC108869; RGD1307787; selectin ligand interactor cytoplasmic-1; similar to RIKEN cDNA 9130017C17 gene; Slic1; sorting nexin-20
Orthologs:
Homo sapiens (human) : SNX20 (sorting nexin 20)  HGNC  Alliance
Mus musculus (house mouse) : Snx20 (sorting nexin 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snx20 (sorting nexin 20)
Pan paniscus (bonobo/pygmy chimpanzee) : SNX20 (sorting nexin 20)
Canis lupus familiaris (dog) : SNX20 (sorting nexin 20)
Sus scrofa (pig) : SNX20 (sorting nexin 20)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01919,395,655 - 19,404,846 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1919,395,655 - 19,404,835 (+)Ensembl
Rnor_5.01930,428,393 - 30,436,777 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41919,715,997 - 19,726,145 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11919,720,822 - 19,730,970 (+)NCBI
Celera1918,322,643 - 18,331,589 (+)NCBICelera
Cytogenetic Map19p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Snx20
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307787
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.