Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Rab5if (RAB5 interacting factor) Rattus norvegicus
Analyze
Symbol: Rab5if
Name: RAB5 interacting factor
Description: Predicted to localize to the integral component of membrane. Orthologous to human RAB5IF (RAB5 interacting factor); INTERACTS WITH 17alpha-ethynylestradiol; 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC296315; MGC109198; RAB5-interacting protein; RGD1307752; similar to RIKEN cDNA 1110008F13
Orthologs:
Homo sapiens (human) : RAB5IF (RAB5 interacting factor)  HGNC  Alliance
Mus musculus (house mouse) : Rab5if (RAB5 interacting factor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rab5if (RAB5 interacting factor)
Pan paniscus (bonobo/pygmy chimpanzee) : RAB5IF (RAB5 interacting factor)
Canis lupus familiaris (dog) : RAB5IF (RAB5 interacting factor)
Sus scrofa (pig) : RAB5IF (RAB5 interacting factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03152,933,771 - 152,943,780 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3152,933,771 - 152,943,777 (+)Ensembl
Rnor_5.03158,753,364 - 158,763,373 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43147,266,788 - 147,276,798 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13147,172,696 - 147,182,704 (+)NCBI
Celera3144,074,935 - 144,085,079 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rab5if
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307752
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.