Gene: Ift46 (intraflagellar transport 46) Rattus norvegicus
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Symbol: Ift46
Name: intraflagellar transport 46
Description: INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; cyclosporin A
AGR Description: Predicted to be involved in cilium assembly, intraciliary transport, and smoothened signaling pathway; predicted to localize to several cellular components, including the centrosome, cytoplasm, and intraciliary transport particle B; orthologous to human IFT46 (intraflagellar transport 46).
Merged Description: Predicted to be involved in cilium assembly, intraciliary transport, and smoothened signaling pathway; predicted to localize to several cellular components, including the centrosome, cytoplasm, and intraciliary transport particle B; orthologous to human IFT46 (intraflagellar transport 46); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; cyclosporin A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: intraflagellar transport 46 homolog; intraflagellar transport 46 homolog (Chlamydomonas); intraflagellar transport protein 46 homolog; intraflagellar transport protein IFT46; LOC300675; RGD1307682; similar to hypothetical protein FLJ21827
Orthologs:
Homo sapiens (human) : IFT46 (intraflagellar transport 46)  HGNC  Alliance
Mus musculus (house mouse) : Ift46 (intraflagellar transport 46)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ift46 (intraflagellar transport 46)
Pan paniscus (bonobo/pygmy chimpanzee) : IFT46 (intraflagellar transport 46)
Canis lupus familiaris (dog) : IFT46 (intraflagellar transport 46)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ift46 (intraflagellar transport 46)
Sus scrofa (pig) : IFT46 (intraflagellar transport 46)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0849,075,978 - 49,097,689 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0847,695,039 - 47,716,197 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4847,729,931 - 47,746,456 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1847,738,696 - 47,755,221 (+)NCBI
Celera844,672,352 - 44,689,060 (+)NCBICelera
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ift46
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307682
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.