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Gene: Tmem50b (transmembrane protein 50B) Rattus norvegicus
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Symbol: Tmem50b
Name: transmembrane protein 50B
Description: Predicted to be involved in late endosome to vacuole transport via multivesicular body sorting pathway. Predicted to localize to the endoplasmic reticulum. Orthologous to human TMEM50B (transmembrane protein 50B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; dibutyl phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC360698; MGC109374; RGD1307561; similar to RIKEN cDNA B230114J08
Orthologs:
Homo sapiens (human) : TMEM50B (transmembrane protein 50B)  HGNC  Alliance
Mus musculus (house mouse) : Tmem50b (transmembrane protein 50B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmem50b (transmembrane protein 50B)
Pan paniscus (bonobo/pygmy chimpanzee) : TMEM50B (transmembrane protein 50B)
Canis lupus familiaris (dog) : LOC478405 (transmembrane protein 50B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmem50b (transmembrane protein 50B)
Sus scrofa (pig) : TMEM50B (transmembrane protein 50B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01131,719,441 - 31,752,276 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1131,719,443 - 31,752,243 (-)Ensembl
Rnor_5.01135,327,975 - 35,361,018 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41131,533,823 - 31,566,625 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11131,572,882 - 31,605,683 (-)NCBI
Celera1130,472,297 - 30,505,079 (-)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tmem50b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307561
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.