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Gene: Gapvd1 (GTPase activating protein and VPS9 domains 1) Rattus norvegicus
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Symbol: Gapvd1
Name: GTPase activating protein and VPS9 domains 1
Description: Predicted to have GTPase activating protein binding activity and guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of protein transport. Predicted to localize to the cytosol and plasma membrane. Orthologous to human GAPVD1 (GTPase activating protein and VPS9 domains 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: MODEL
Also known as: GTPase-activating protein and VPS9 domain-containing protein 1; LOC311880; RGD1307479; similar to KIAA1521 protein
Orthologs:
Homo sapiens (human) : GAPVD1 (GTPase activating protein and VPS9 domains 1)  HGNC  Alliance
Mus musculus (house mouse) : Gapvd1 (GTPase activating protein and VPS9 domains 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gapvd1 (GTPase activating protein and VPS9 domains 1)
Pan paniscus (bonobo/pygmy chimpanzee) : GAPVD1 (GTPase activating protein and VPS9 domains 1)
Canis lupus familiaris (dog) : GAPVD1 (GTPase activating protein and VPS9 domains 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gapvd1 (GTPase activating protein and VPS9 domains 1)
Sus scrofa (pig) : GAPVD1 (GTPase activating protein and VPS9 domains 1)
Chlorocebus sabaeus (green monkey) : GAPVD1 (GTPase activating protein and VPS9 domains 1)
Heterocephalus glaber (naked mole-rat) : Gapvd1 (GTPase activating protein and VPS9 domains 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0313,751,572 - 13,825,573 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl313,753,165 - 13,824,870 (-)Ensembl
Rnor_5.0319,071,797 - 19,157,428 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4313,695,149 - 13,769,982 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1313,592,436 - 13,666,436 (-)NCBI
Celera312,689,639 - 12,763,753 (-)NCBICelera
Cytogenetic Map3p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Gapvd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307479
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.