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Gene: Foxi1 (forkhead box I1) Rattus norvegicus
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Symbol: Foxi1
Name: forkhead box I1
RGD ID: 1307421
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell differentiation; inner ear morphogenesis; and positive regulation of transcription by RNA polymerase II. Predicted to localize to nuclear chromatin and nucleolus. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 4. Orthologous to human FOXI1 (forkhead box I1); INTERACTS WITH bisphenol A; copper atom; copper(0).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: forkhead box protein I1; LOC287185
Orthologs:
Homo sapiens (human) : FOXI1 (forkhead box I1)  HGNC  Alliance
Mus musculus (house mouse) : Foxi1 (forkhead box I1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Foxi1 (forkhead box I1)
Pan paniscus (bonobo/pygmy chimpanzee) : FOXI1 (forkhead box I1)
Canis lupus familiaris (dog) : FOXI1 (forkhead box I1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Foxi1 (forkhead box I1)
Sus scrofa (pig) : FOXI1 (forkhead box I1)
Chlorocebus sabaeus (African green monkey) : FOXI1 (forkhead box I1)
Heterocephalus glaber (naked mole-rat) : Foxi1 (forkhead box I1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01019,160,566 - 19,164,505 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1019,160,582 - 19,164,505 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01019,039,086 - 19,043,025 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41019,185,917 - 19,189,856 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11019,188,079 - 19,190,836 (-)NCBI
Celera1018,438,984 - 18,442,923 (-)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Foxi1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307421
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.