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Gene: Slc39a10 (solute carrier family 39 member 10) Rattus norvegicus

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Symbol:

Slc39a10

Name:

solute carrier family 39 member 10

RGD ID:

1307321

Description:

Predicted to enable monoatomic cation:bicarbonate symporter activity; protein tyrosine phosphatase activator activity; and zinc ion transmembrane transporter activity. Predicted to be involved in epithelial to mesenchymal transition; intracellular monoatomic cation homeostasis; and zinc ion import across plasma membrane. Predicted to act upstream of or within several processes, including intracellular zinc ion homeostasis; positive regulation of B cell proliferation; and positive regulation of B cell receptor signaling pathway. Predicted to be located in apical plasma membrane. Predicted to be active in plasma membrane. Orthologous to human SLC39A10 (solute carrier family 39 member 10); INTERACTS WITH 1,2-dimethylhydrazine; 1,3-dicyclohexylcarbodiimide; 1-benzylpiperazine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC363229; solute carrier family 39 (zinc transporter), member 10; zinc transporter ZIP10

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	62,331,281 - 62,454,754 (+)	NCBI		GRCr8
mRatBN7.2	9	54,836,841 - 54,960,325 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	54,876,141 - 54,960,325 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	63,415,252 - 63,464,475 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	68,531,028 - 68,580,251 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	66,826,876 - 66,876,105 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	59,947,562 - 60,070,549 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	60,021,534 - 60,070,552 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	59,634,923 - 59,758,222 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	52,168,107 - 52,217,677 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	52,169,481 - 52,216,722 (+)	NCBI
Celera	9	52,413,746 - 52,463,043 (+)	NCBI		Celera
Cytogenetic Map	9	q31	NCBI

JBrowse:

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Model

Annotation Click to see Annotation Detail View

Imported Disease Annotations - ClinVar

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc39a10	Rat	Neurodevelopmental Disorders		ISO	RGD:1316445	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868

Imported Disease Annotations - CTD

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc39a10	Rat	Neoplasm Invasiveness		ISO	RGD:1316445	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:17359283

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc39a10	Rat	(-)-epigallocatechin 3-gallate	multiple interactions	ISO	RGD:1316445	6480464	[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of SLC39A10 mRNA	CTD	PMID:22079256
Slc39a10	Rat	1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene	multiple interactions	ISO	RGD:1316446	6480464	[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...	CTD	PMID:25510870
Slc39a10	Rat	1,2-dimethylhydrazine	multiple interactions	EXP		6480464	[APC protein affects the susceptibility to 1,2-Dimethylhydrazine] which results in increased expression of SLC39A10 mRNA	CTD	PMID:27840820
Slc39a10	Rat	1,3-dicyclohexylcarbodiimide	multiple interactions	EXP		6480464	Dicyclohexylcarbodiimide inhibits the reaction [SLC39A10 protein results in increased uptake of Zinc]	CTD	PMID:16804107
Slc39a10	Rat	1-benzylpiperazine	increases expression	EXP		6480464	N-benzylpiperazine results in increased expression of SLC39A10 mRNA	CTD	PMID:26821219
Slc39a10	Rat	17beta-estradiol	decreases expression	ISO	RGD:1316445	6480464	Estradiol results in decreased expression of SLC39A10 mRNA	CTD	PMID:20106945\|PMID:21632981
Slc39a10	Rat	17beta-estradiol	multiple interactions	EXP		6480464	[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in decreased expression of SLC39A10 mRNA	CTD	PMID:32741896
Slc39a10	Rat	17beta-estradiol	multiple interactions	ISO	RGD:1316445	6480464	[Estradiol co-treated with TGFB1 protein] results in increased expression of SLC39A10 mRNA	CTD	PMID:30165855
Slc39a10	Rat	17beta-estradiol 3-benzoate	decreases expression	EXP		6480464	estradiol 3-benzoate results in decreased expression of SLC39A10 mRNA	CTD	PMID:32741896
Slc39a10	Rat	17beta-estradiol 3-benzoate	multiple interactions	EXP		6480464	[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in decreased expression of SLC39A10 mRNA	CTD	PMID:32741896
Slc39a10	Rat	17beta-hydroxy-5alpha-androstan-3-one	increases expression	ISO	RGD:1316445	6480464	Dihydrotestosterone results in increased expression of SLC39A10 mRNA	CTD	PMID:29581250
Slc39a10	Rat	2,2',4,4',5,5'-hexachlorobiphenyl	multiple interactions	ISO	RGD:1316446	6480464	[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...	CTD	PMID:25510870
Slc39a10	Rat	2,2',4,4'-Tetrabromodiphenyl ether	affects expression	ISO	RGD:1316446	6480464	2,2',4,4'-tetrabromodiphenyl ether affects the expression of SLC39A10 mRNA	CTD	PMID:30294300
Slc39a10	Rat	2,2',5,5'-tetrachlorobiphenyl	multiple interactions	ISO	RGD:1316446	6480464	[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...	CTD	PMID:25510870
Slc39a10	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	RGD:1316445	6480464	Tetrachlorodibenzodioxin results in increased expression of SLC39A10 mRNA	CTD	PMID:20106945
Slc39a10	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of SLC39A10 mRNA	CTD	PMID:34747641
Slc39a10	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	RGD:1316446	6480464	Tetrachlorodibenzodioxin affects the expression of SLC39A10 mRNA	CTD	PMID:21570461
Slc39a10	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of SLC39A10 mRNA	CTD	PMID:21215274
Slc39a10	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	RGD:1316446	6480464	Tetrachlorodibenzodioxin results in increased expression of SLC39A10 mRNA	CTD	PMID:21354282
Slc39a10	Rat	2,4,4'-trichlorobiphenyl	multiple interactions	ISO	RGD:1316446	6480464	[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...	CTD	PMID:25510870
Slc39a10	Rat	2-methylcholine	affects expression	ISO	RGD:1316445	6480464	beta-methylcholine affects the expression of SLC39A10 mRNA	CTD	PMID:21179406
Slc39a10	Rat	3,4-methylenedioxymethamphetamine	decreases expression	ISO	RGD:1316446	6480464	N-Methyl-3,4-methylenedioxyamphetamine results in decreased expression of SLC39A10 mRNA	CTD	PMID:26251327
Slc39a10	Rat	6-propyl-2-thiouracil	increases expression	EXP		6480464	Propylthiouracil results in increased expression of SLC39A10 mRNA	CTD	PMID:30047161
Slc39a10	Rat	acetamide	increases expression	EXP		6480464	acetamide results in increased expression of SLC39A10 mRNA	CTD	PMID:31881176
Slc39a10	Rat	acrolein	multiple interactions	ISO	RGD:1316445	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Slc39a10	Rat	acrylamide	increases expression	ISO	RGD:1316446	6480464	Acrylamide results in increased expression of SLC39A10 mRNA	CTD	PMID:30807115
Slc39a10	Rat	actinomycin D	multiple interactions	ISO	RGD:1316446	6480464	Dactinomycin inhibits the reaction [N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine results in increased expression of SLC39A10 mRNA]	CTD	PMID:21738690
Slc39a10	Rat	aflatoxin B1	affects expression	ISO	RGD:1316445	6480464	Aflatoxin B1 affects the expression of SLC39A10 protein	CTD	PMID:20106945
Slc39a10	Rat	aflatoxin B1	increases expression	ISO	RGD:1316445	6480464	Aflatoxin B1 results in increased expression of SLC39A10 mRNA	CTD	PMID:27153756
Slc39a10	Rat	all-trans-retinoic acid	decreases expression	ISO	RGD:1316445	6480464	Tretinoin results in decreased expression of SLC39A10 mRNA	CTD	PMID:33167477
Slc39a10	Rat	alpha-pinene	multiple interactions	ISO	RGD:1316445	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Slc39a10	Rat	amitrole	increases expression	EXP		6480464	Amitrole results in increased expression of SLC39A10 mRNA	CTD	PMID:30047161
Slc39a10	Rat	Aroclor 1254	decreases expression	ISO	RGD:1316446	6480464	Chlorodiphenyl (54% Chlorine) results in decreased expression of SLC39A10 mRNA	CTD	PMID:23650126
Slc39a10	Rat	arsane	multiple interactions	ISO	RGD:1316445	6480464	[sodium arsenite results in increased abundance of Arsenic] which results in decreased expression of SLC39A10 more ...	CTD	PMID:39836092
Slc39a10	Rat	arsenic atom	multiple interactions	ISO	RGD:1316445	6480464	[sodium arsenite results in increased abundance of Arsenic] which results in decreased expression of SLC39A10 more ...	CTD	PMID:39836092
Slc39a10	Rat	arsenite(3-)	multiple interactions	ISO	RGD:1316445	6480464	arsenite inhibits the reaction [G3BP1 protein binds to SLC39A10 mRNA]	CTD	PMID:32406909
Slc39a10	Rat	arsenous acid	decreases expression	ISO	RGD:1316445	6480464	Arsenic Trioxide results in decreased expression of SLC39A10 mRNA	CTD	PMID:27829220
Slc39a10	Rat	atrazine	decreases expression	EXP		6480464	Atrazine results in decreased expression of SLC39A10 mRNA	CTD	PMID:36841081
Slc39a10	Rat	Azoxymethane	multiple interactions	ISO	RGD:1316446	6480464	[titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in decreased expression of SLC39A10 more ...	CTD	PMID:29950665
Slc39a10	Rat	benzo[a]pyrene	increases expression	ISO	RGD:1316445	6480464	Benzo(a)pyrene results in increased expression of SLC39A10 mRNA	CTD	PMID:20106945\|PMID:32234424
Slc39a10	Rat	benzo[a]pyrene	affects methylation	ISO	RGD:1316445	6480464	Benzo(a)pyrene affects the methylation of SLC39A10 promoter	CTD	PMID:27901495
Slc39a10	Rat	bis(2-ethylhexyl) phthalate	decreases expression	ISO	RGD:1316446	6480464	Diethylhexyl Phthalate results in decreased expression of SLC39A10 mRNA	CTD	PMID:33754040
Slc39a10	Rat	bisphenol A	decreases expression	ISO	RGD:1316446	6480464	bisphenol A results in decreased expression of SLC39A10 mRNA	CTD	PMID:26063408
Slc39a10	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of SLC39A10 mRNA	CTD	PMID:32145629
Slc39a10	Rat	bisphenol A	decreases expression	ISO	RGD:1316445	6480464	bisphenol A results in decreased expression of SLC39A10 mRNA; bisphenol A results in decreased expression more ...	CTD	PMID:29275510\|PMID:33376534
Slc39a10	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of SLC39A10 mRNA	CTD	PMID:25181051
Slc39a10	Rat	bisphenol A	multiple interactions	EXP		6480464	[bisphenol A co-treated with Testosterone] results in increased expression of SLC39A10 mRNA	CTD	PMID:26496021
Slc39a10	Rat	cadmium atom	multiple interactions	EXP		6480464	Cadmium inhibits the reaction [SLC39A10 protein results in increased uptake of Zinc]	CTD	PMID:16804107
Slc39a10	Rat	cadmium atom	multiple interactions	ISO	RGD:1316446	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of SLC39A10 more ...	CTD	PMID:37325564
Slc39a10	Rat	cadmium atom	multiple interactions	ISO	RGD:1316445	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of SLC39A10 more ...	CTD	PMID:31738976
Slc39a10	Rat	cadmium dichloride	affects expression	EXP		6480464	Cadmium Chloride affects the expression of SLC39A10 mRNA	CTD	PMID:22110744
Slc39a10	Rat	cadmium dichloride	multiple interactions	ISO	RGD:1316446	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of SLC39A10 more ...	CTD	PMID:37325564
Slc39a10	Rat	cadmium dichloride	decreases expression	ISO	RGD:1316445	6480464	Cadmium Chloride results in decreased expression of SLC39A10 mRNA	CTD	PMID:38568856
Slc39a10	Rat	cadmium dichloride	multiple interactions	ISO	RGD:1316445	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of SLC39A10 more ...	CTD	PMID:31738976
Slc39a10	Rat	cadmium sulfate	multiple interactions	ISO	RGD:1316446	6480464	cadmium sulfate affects the reaction [MTF1 affects the expression of SLC39A10 mRNA]	CTD	PMID:16221973
Slc39a10	Rat	calcitriol	decreases expression	ISO	RGD:1316445	6480464	Calcitriol results in decreased expression of SLC39A10 mRNA	CTD	PMID:20089671
Slc39a10	Rat	cannabidiol	decreases expression	ISO	RGD:1316446	6480464	Cannabidiol results in decreased expression of SLC39A10 mRNA	CTD	PMID:21542829\|PMID:22178458
Slc39a10	Rat	carbamazepine	affects expression	ISO	RGD:1316445	6480464	Carbamazepine affects the expression of SLC39A10 mRNA	CTD	PMID:25979313
Slc39a10	Rat	carbon nanotube	increases expression	ISO	RGD:1316446	6480464	Nanotubes, Carbon analog results in increased expression of SLC39A10 mRNA; Nanotubes, Carbon results in increased more ...	CTD	PMID:25554681
Slc39a10	Rat	CGP 52608	multiple interactions	ISO	RGD:1316445	6480464	CGP 52608 promotes the reaction [RORA protein binds to SLC39A10 gene]	CTD	PMID:28238834
Slc39a10	Rat	chlorpyrifos	decreases expression	ISO	RGD:1316446	6480464	Chlorpyrifos results in decreased expression of SLC39A10 mRNA	CTD	PMID:37019170
Slc39a10	Rat	cisplatin	decreases expression	ISO	RGD:1316445	6480464	Cisplatin results in decreased expression of SLC39A10 mRNA	CTD	PMID:27594783
Slc39a10	Rat	cobalt dichloride	decreases expression	EXP		6480464	cobaltous chloride results in decreased expression of SLC39A10 mRNA	CTD	PMID:24386269
Slc39a10	Rat	cocaine	decreases expression	EXP		6480464	Cocaine results in decreased expression of SLC39A10 mRNA	CTD	PMID:17898221
Slc39a10	Rat	coumarin	increases phosphorylation	ISO	RGD:1316445	6480464	coumarin results in increased phosphorylation of SLC39A10 protein	CTD	PMID:35688186
Slc39a10	Rat	cyclosporin A	decreases expression	ISO	RGD:1316445	6480464	Cyclosporine results in decreased expression of SLC39A10 mRNA	CTD	PMID:20106945\|PMID:24907557\|PMID:25562108\|PMID:27989131
Slc39a10	Rat	dextran sulfate	multiple interactions	ISO	RGD:1316446	6480464	[titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in decreased expression of SLC39A10 more ...	CTD	PMID:29950665
Slc39a10	Rat	diarsenic trioxide	decreases expression	ISO	RGD:1316445	6480464	Arsenic Trioxide results in decreased expression of SLC39A10 mRNA	CTD	PMID:27829220
Slc39a10	Rat	Dibutyl phosphate	affects expression	ISO	RGD:1316445	6480464	di-n-butylphosphoric acid affects the expression of SLC39A10 mRNA	CTD	PMID:37042841
Slc39a10	Rat	dicrotophos	decreases expression	ISO	RGD:1316445	6480464	dicrotophos results in decreased expression of SLC39A10 mRNA	CTD	PMID:28302478
Slc39a10	Rat	dorsomorphin	multiple interactions	ISO	RGD:1316445	6480464	[NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Slc39a10	Rat	doxorubicin	increases expression	ISO	RGD:1316445	6480464	Doxorubicin results in increased expression of SLC39A10 mRNA	CTD	PMID:29803840
Slc39a10	Rat	enzyme inhibitor	multiple interactions	ISO	RGD:1316445	6480464	[Enzyme Inhibitors results in decreased activity of OGA protein] which results in increased O-linked glycosylation more ...	CTD	PMID:23301498
Slc39a10	Rat	ethanol	multiple interactions	ISO	RGD:1316446	6480464	Ethanol affects the expression of and affects the splicing of SLC39A10 mRNA	CTD	PMID:30319688
Slc39a10	Rat	ethyl methanesulfonate	decreases expression	ISO	RGD:1316445	6480464	Ethyl Methanesulfonate results in decreased expression of SLC39A10 mRNA	CTD	PMID:23649840
Slc39a10	Rat	flusilazole	decreases expression	EXP		6480464	flusilazole results in decreased expression of SLC39A10 mRNA	CTD	PMID:28263823
Slc39a10	Rat	FR900359	affects phosphorylation	ISO	RGD:1316445	6480464	FR900359 affects the phosphorylation of SLC39A10 protein	CTD	PMID:37730182
Slc39a10	Rat	gadodiamide hydrate	increases expression	ISO	RGD:1316445	6480464	gadodiamide results in increased expression of SLC39A10 mRNA	CTD	PMID:20959327
Slc39a10	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of SLC39A10 mRNA	CTD	PMID:22061828
Slc39a10	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of SLC39A10 mRNA	CTD	PMID:33387578
Slc39a10	Rat	hydrogen peroxide	affects expression	ISO	RGD:1316445	6480464	Hydrogen Peroxide affects the expression of SLC39A10 mRNA	CTD	PMID:20044591
Slc39a10	Rat	inulin	multiple interactions	ISO	RGD:1316446	6480464	[perfluorooctane sulfonic acid co-treated with Inulin] results in decreased expression of SLC39A10 mRNA	CTD	PMID:36331819
Slc39a10	Rat	ivermectin	decreases expression	ISO	RGD:1316445	6480464	Ivermectin results in decreased expression of SLC39A10 protein	CTD	PMID:32959892
Slc39a10	Rat	lead diacetate	decreases expression	ISO	RGD:1316446	6480464	lead acetate results in decreased expression of SLC39A10 mRNA	CTD	PMID:25270620
Slc39a10	Rat	lipopolysaccharide	decreases expression	ISO	RGD:1316446	6480464	Lipopolysaccharides results in decreased expression of SLC39A10 mRNA; Lipopolysaccharides results in decreased expression of SLC39A10 more ...	CTD	PMID:16892068\|PMID:17126599
Slc39a10	Rat	lipopolysaccharide	multiple interactions	ISO	RGD:1316446	6480464	TICAM1 protein affects the reaction [Lipopolysaccharides results in decreased expression of SLC39A10 protein]	CTD	PMID:16892068
Slc39a10	Rat	mercaptoethanol	multiple interactions	EXP		6480464	Mercaptoethanol inhibits the reaction [SLC39A10 protein results in increased uptake of Zinc]	CTD	PMID:16804107
Slc39a10	Rat	methimazole	increases expression	EXP		6480464	Methimazole results in increased expression of SLC39A10 mRNA	CTD	PMID:30047161
Slc39a10	Rat	methotrexate	affects expression	ISO	RGD:1316446	6480464	Methotrexate affects the expression of SLC39A10 mRNA	CTD	PMID:18502557
Slc39a10	Rat	methoxychlor	affects methylation	EXP		6480464	Methoxychlor affects the methylation of SLC39A10 gene	CTD	PMID:35440735
Slc39a10	Rat	methyl methanesulfonate	decreases expression	ISO	RGD:1316445	6480464	Methyl Methanesulfonate results in decreased expression of SLC39A10 mRNA	CTD	PMID:23649840
Slc39a10	Rat	motexafin gadolinium	multiple interactions	ISO	RGD:1316445	6480464	[Zinc Acetate co-treated with motexafin gadolinium] affects the expression of SLC39A10 mRNA	CTD	PMID:16357179
Slc39a10	Rat	motexafin gadolinium	affects expression	ISO	RGD:1316445	6480464	motexafin gadolinium affects the expression of SLC39A10 mRNA	CTD	PMID:16357179
Slc39a10	Rat	N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine	increases expression	ISO	RGD:1316446	6480464	N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine results in increased expression of SLC39A10 mRNA; N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine results in increased expression of SLC39A10 more ...	CTD	PMID:21738690
Slc39a10	Rat	N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine	multiple interactions	ISO	RGD:1316446	6480464	Dactinomycin inhibits the reaction [N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine results in increased expression of SLC39A10 mRNA]; N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine inhibits the more ...	CTD	PMID:21738690
Slc39a10	Rat	N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine	multiple interactions	ISO	RGD:1316445	6480464	[ochratoxin A co-treated with N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine co-treated with Zinc] results in decreased expression of SLC39A10 mRNA; more ...	CTD	PMID:19720134
Slc39a10	Rat	nickel dichloride	affects expression	EXP		6480464	nickel chloride affects the expression of SLC39A10 mRNA	CTD	PMID:22110744
Slc39a10	Rat	ochratoxin A	multiple interactions	ISO	RGD:1316445	6480464	[ochratoxin A co-treated with N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine co-treated with Zinc] results in decreased expression of SLC39A10 mRNA; more ...	CTD	PMID:19720134
Slc39a10	Rat	ozone	multiple interactions	ISO	RGD:1316445	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268\|PMID:35430440
Slc39a10	Rat	ozone	multiple interactions	ISO	RGD:1316446	6480464	[Air Pollutants results in increased abundance of Ozone] which results in increased expression of SLC39A10 more ...	CTD	PMID:34911549
Slc39a10	Rat	p-chloromercuribenzoic acid	decreases expression	ISO	RGD:1316445	6480464	p-Chloromercuribenzoic Acid results in decreased expression of SLC39A10 mRNA	CTD	PMID:26272509
Slc39a10	Rat	p-chloromercuribenzoic acid	multiple interactions	ISO	RGD:1316445	6480464	[NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Slc39a10	Rat	paracetamol	increases expression	ISO	RGD:1316445	6480464	Acetaminophen results in increased expression of SLC39A10 mRNA	CTD	PMID:29067470
Slc39a10	Rat	paracetamol	decreases expression	EXP		6480464	Acetaminophen results in decreased expression of SLC39A10 mRNA	CTD	PMID:33387578
Slc39a10	Rat	PCB138	multiple interactions	ISO	RGD:1316446	6480464	[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...	CTD	PMID:25510870
Slc39a10	Rat	pentetic acid	increases expression	ISO	RGD:1316446	6480464	Pentetic Acid results in increased expression of SLC39A10 mRNA; Pentetic Acid results in increased expression more ...	CTD	PMID:21738690
Slc39a10	Rat	perfluorooctane-1-sulfonic acid	decreases expression	ISO	RGD:1316445	6480464	perfluorooctane sulfonic acid results in decreased expression of SLC39A10 mRNA	CTD	PMID:27153767
Slc39a10	Rat	perfluorooctane-1-sulfonic acid	multiple interactions	ISO	RGD:1316446	6480464	[perfluorooctane sulfonic acid co-treated with Inulin] results in decreased expression of SLC39A10 mRNA; [perfluorooctane sulfonic more ...	CTD	PMID:36331819
Slc39a10	Rat	phenobarbital	affects expression	ISO	RGD:1316446	6480464	Phenobarbital affects the expression of SLC39A10 mRNA	CTD	PMID:23091169
Slc39a10	Rat	phenylmercury acetate	decreases expression	ISO	RGD:1316445	6480464	Phenylmercuric Acetate results in decreased expression of SLC39A10 mRNA	CTD	PMID:26272509
Slc39a10	Rat	phenylmercury acetate	multiple interactions	ISO	RGD:1316445	6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Slc39a10	Rat	potassium chromate	decreases expression	ISO	RGD:1316445	6480464	potassium chromate(VI) results in decreased expression of SLC39A10 mRNA	CTD	PMID:22079256
Slc39a10	Rat	potassium chromate	multiple interactions	ISO	RGD:1316445	6480464	[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of SLC39A10 mRNA	CTD	PMID:22079256
Slc39a10	Rat	quercetin	increases expression	ISO	RGD:1316445	6480464	Quercetin results in increased expression of SLC39A10 mRNA	CTD	PMID:21632981
Slc39a10	Rat	rimonabant	multiple interactions	ISO	RGD:1316446	6480464	Rimonabant inhibits the reaction [Dietary Fats results in increased expression of SLC39A10 mRNA]	CTD	PMID:19030233
Slc39a10	Rat	SB 431542	multiple interactions	ISO	RGD:1316445	6480464	[NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Slc39a10	Rat	silicon dioxide	increases expression	ISO	RGD:1316445	6480464	Silicon Dioxide analog results in increased expression of SLC39A10 mRNA	CTD	PMID:25895662
Slc39a10	Rat	silver atom	decreases expression	ISO	RGD:1316445	6480464	Silver results in decreased expression of SLC39A10 mRNA	CTD	PMID:26014281
Slc39a10	Rat	silver(0)	decreases expression	ISO	RGD:1316445	6480464	Silver results in decreased expression of SLC39A10 mRNA	CTD	PMID:26014281
Slc39a10	Rat	sodium arsenite	multiple interactions	ISO	RGD:1316446	6480464	[sodium arsenite co-treated with zinc chloride] affects the expression of and affects the localization of more ...	CTD	PMID:37797845
Slc39a10	Rat	sodium arsenite	decreases expression	ISO	RGD:1316446	6480464	sodium arsenite results in decreased expression of SLC39A10 mRNA	CTD	PMID:37682722
Slc39a10	Rat	sodium arsenite	multiple interactions	ISO	RGD:1316445	6480464	[sodium arsenite results in increased abundance of Arsenic] which results in decreased expression of SLC39A10 more ...	CTD	PMID:39836092
Slc39a10	Rat	sodium arsenite	decreases expression	ISO	RGD:1316445	6480464	sodium arsenite results in decreased expression of SLC39A10 mRNA	CTD	PMID:38568856
Slc39a10	Rat	sulfadimethoxine	increases expression	EXP		6480464	Sulfadimethoxine results in increased expression of SLC39A10 mRNA	CTD	PMID:30047161
Slc39a10	Rat	tebufenpyrad	decreases expression	ISO	RGD:1316445	6480464	4-chloro-N-((4-(1,1-dimethylethyl)phenyl)methyl)-3-ethyl-1-methyl-1H-pyrazole-5-carboxamide results in decreased expression of SLC39A10 mRNA	CTD	PMID:33512557
Slc39a10	Rat	temozolomide	decreases expression	ISO	RGD:1316445	6480464	Temozolomide results in decreased expression of SLC39A10 mRNA	CTD	PMID:31758290
Slc39a10	Rat	testosterone	multiple interactions	EXP		6480464	[bisphenol A co-treated with Testosterone] results in increased expression of SLC39A10 mRNA; [estradiol 3-benzoate co-treated more ...	CTD	PMID:26496021\|PMID:32741896
Slc39a10	Rat	tetrachloromethane	increases expression	ISO	RGD:1316446	6480464	Carbon Tetrachloride results in increased expression of SLC39A10 mRNA	CTD	PMID:31919559
Slc39a10	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of SLC39A10 mRNA	CTD	PMID:23411599\|PMID:34492290
Slc39a10	Rat	titanium dioxide	multiple interactions	ISO	RGD:1316446	6480464	[titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in decreased expression of SLC39A10 more ...	CTD	PMID:29950665
Slc39a10	Rat	titanium dioxide	decreases methylation	ISO	RGD:1316446	6480464	titanium dioxide results in decreased methylation of SLC39A10 gene	CTD	PMID:35295148
Slc39a10	Rat	triphenyl phosphate	affects expression	ISO	RGD:1316445	6480464	triphenyl phosphate affects the expression of SLC39A10 mRNA	CTD	PMID:37042841
Slc39a10	Rat	triptonide	decreases expression	ISO	RGD:1316446	6480464	triptonide results in decreased expression of SLC39A10 mRNA	CTD	PMID:33045310
Slc39a10	Rat	valdecoxib	increases expression	EXP		6480464	valdecoxib results in increased expression of SLC39A10 mRNA	CTD	PMID:24136188
Slc39a10	Rat	valproic acid	decreases methylation	ISO	RGD:1316445	6480464	Valproic Acid results in decreased methylation of SLC39A10 gene	CTD	PMID:29154799
Slc39a10	Rat	valproic acid	affects splicing	EXP		6480464	Valproic Acid affects the splicing of SLC39A10 mRNA	CTD	PMID:29427782
Slc39a10	Rat	valproic acid	affects expression	ISO	RGD:1316445	6480464	Valproic Acid affects the expression of SLC39A10 mRNA	CTD	PMID:25979313
Slc39a10	Rat	valproic acid	decreases expression	ISO	RGD:1316445	6480464	Valproic Acid results in decreased expression of SLC39A10 mRNA	CTD	PMID:23179753
Slc39a10	Rat	valproic acid	affects expression	ISO	RGD:1316446	6480464	Valproic Acid affects the expression of SLC39A10 mRNA	CTD	PMID:17292431
Slc39a10	Rat	zidovudine	decreases expression	ISO	RGD:1316445	6480464	Zidovudine results in decreased expression of SLC39A10 mRNA	CTD	PMID:24292225
Slc39a10	Rat	zinc acetate	affects expression	ISO	RGD:1316445	6480464	Zinc Acetate affects the expression of SLC39A10 mRNA	CTD	PMID:16357179
Slc39a10	Rat	zinc acetate	multiple interactions	ISO	RGD:1316445	6480464	[Zinc Acetate co-treated with motexafin gadolinium] affects the expression of SLC39A10 mRNA	CTD	PMID:16357179
Slc39a10	Rat	zinc atom	increases expression	ISO	RGD:1316446	6480464	Zinc deficiency results in increased expression of SLC39A10 mRNA; Zinc deficiency results in increased expression more ...	CTD	PMID:18936201\|PMID:21738690\|PMID:25088245
Slc39a10	Rat	zinc atom	decreases expression	ISO	RGD:1316446	6480464	Zinc results in decreased expression of SLC39A10 mRNA	CTD	PMID:21738690
Slc39a10	Rat	zinc atom	multiple interactions	ISO	RGD:1316446	6480464	MTF1 mutant form inhibits the reaction [Zinc results in decreased expression of SLC39A10 mRNA]; Zinc more ...	CTD	PMID:21738690
Slc39a10	Rat	zinc atom	multiple interactions	ISO	RGD:1316445	6480464	[ochratoxin A co-treated with N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine co-treated with Zinc] results in decreased expression of SLC39A10 mRNA; more ...	CTD	PMID:18593933\|PMID:19720134
Slc39a10	Rat	zinc atom	increases expression	EXP		6480464	Zinc results in increased expression of SLC39A10 mRNA; Zinc results in increased expression of SLC39A10 more ...	CTD	PMID:16804107
Slc39a10	Rat	zinc atom	increases uptake	EXP		6480464	SLC39A10 protein results in increased uptake of Zinc	CTD	PMID:16804107
Slc39a10	Rat	zinc atom	decreases expression	EXP		6480464	Zinc results in decreased expression of SLC39A10 mRNA; Zinc results in decreased expression of SLC39A10 more ...	CTD	PMID:16804107
Slc39a10	Rat	zinc atom	multiple interactions	EXP		6480464	Cadmium inhibits the reaction [SLC39A10 protein results in increased uptake of Zinc]; Dicyclohexylcarbodiimide inhibits the more ...	CTD	PMID:16804107
Slc39a10	Rat	zinc atom	increases transport	ISO	RGD:1316445	6480464	SLC39A10 protein results in increased transport of Zinc	CTD	PMID:18326752
Slc39a10	Rat	zinc dichloride	multiple interactions	ISO	RGD:1316446	6480464	[sodium arsenite co-treated with zinc chloride] affects the expression of and affects the localization of more ...	CTD	PMID:37797845
Slc39a10	Rat	zinc sulfate	decreases expression	EXP		6480464	Zinc Sulfate results in decreased expression of SLC39A10 mRNA; Zinc Sulfate results in decreased expression more ...	CTD	PMID:16804107
Slc39a10	Rat	zinc sulfate	increases expression	EXP		6480464	Zinc Sulfate results in increased expression of SLC39A10 mRNA; Zinc Sulfate results in increased expression more ...	CTD	PMID:16804107
Slc39a10	Rat	zinc(0)	increases expression	ISO	RGD:1316446	6480464	Zinc deficiency results in increased expression of SLC39A10 mRNA; Zinc deficiency results in increased expression more ...	CTD	PMID:18936201\|PMID:21738690\|PMID:25088245
Slc39a10	Rat	zinc(0)	increases transport	ISO	RGD:1316445	6480464	SLC39A10 protein results in increased transport of Zinc	CTD	PMID:18326752
Slc39a10	Rat	zinc(0)	multiple interactions	EXP		6480464	Cadmium inhibits the reaction [SLC39A10 protein results in increased uptake of Zinc]; Dicyclohexylcarbodiimide inhibits the more ...	CTD	PMID:16804107
Slc39a10	Rat	zinc(0)	decreases expression	EXP		6480464	Zinc results in decreased expression of SLC39A10 mRNA; Zinc results in decreased expression of SLC39A10 more ...	CTD	PMID:16804107
Slc39a10	Rat	zinc(0)	increases uptake	EXP		6480464	SLC39A10 protein results in increased uptake of Zinc	CTD	PMID:16804107
Slc39a10	Rat	zinc(0)	increases expression	EXP		6480464	Zinc results in increased expression of SLC39A10 mRNA; Zinc results in increased expression of SLC39A10 more ...	CTD	PMID:16804107
Slc39a10	Rat	zinc(0)	multiple interactions	ISO	RGD:1316445	6480464	[ochratoxin A co-treated with N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine co-treated with Zinc] results in decreased expression of SLC39A10 mRNA; more ...	CTD	PMID:18593933\|PMID:19720134
Slc39a10	Rat	zinc(0)	multiple interactions	ISO	RGD:1316446	6480464	MTF1 mutant form inhibits the reaction [Zinc results in decreased expression of SLC39A10 mRNA]; Zinc more ...	CTD	PMID:21738690
Slc39a10	Rat	zinc(0)	decreases expression	ISO	RGD:1316446	6480464	Zinc results in decreased expression of SLC39A10 mRNA	CTD	PMID:21738690
Slc39a10	Rat	zoledronic acid	decreases expression	ISO	RGD:1316445	6480464	zoledronic acid results in decreased expression of SLC39A10 mRNA	CTD	PMID:24714768

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc39a10	Rat	bicarbonate transport	involved_in	IEA	GO:0140410	1600115	GO_REF:0000108	GOC	GO_REF:0000108
Slc39a10	Rat	epithelial to mesenchymal transition	involved_in	ISO	RGD:1316445	1624291	PMID:27274087	RGD	PMID:27274087
Slc39a10	Rat	epithelial to mesenchymal transition	involved_in	IEA	UniProtKB:Q6P5F6\|ensembl:ENSMUSP00000027131	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	epithelial to mesenchymal transition	involved_in	IEA	UniProtKB:Q9ULF5\|ensembl:ENSP00000352655	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	epithelial to mesenchymal transition	involved_in	ISO	RGD:1316446	1624291	PMID:28098160	RGD	PMID:28098160
Slc39a10	Rat	intracellular monoatomic cation homeostasis	involved_in	IBA	FB:FBgn0024236\|FB:FBgn0036461\|MGI:1914515\|MGI:1914797\|MGI:1919277\|MGI:2384851\|PANTHER:PTN000953562\|RGD:1308236\|UniProtKB:P0DX17\|UniProtKB:Q13433\|UniProtKB:Q15043\|UniProtKB:Q9C0K1\|ZFIN:ZDB-GENE-030131-3023	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc39a10	Rat	intracellular zinc ion homeostasis	acts_upstream_of_or_within	ISO	RGD:1316446	1624291	MGI:5642301 PMID:25074913	RGD	PMID:25074913
Slc39a10	Rat	intracellular zinc ion homeostasis	acts_upstream_of_or_within	IEA	UniProtKB:Q6P5F6\|ensembl:ENSMUSP00000027131	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	metal ion transport	involved_in	IEA	InterPro:IPR003689	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Slc39a10	Rat	negative regulation of B cell apoptotic process	acts_upstream_of_or_within	ISO	RGD:1316446	1624291	MGI:5642301 PMID:25074913	RGD	PMID:25074913
Slc39a10	Rat	negative regulation of B cell apoptotic process	acts_upstream_of_or_within	IEA	UniProtKB:Q6P5F6\|ensembl:ENSMUSP00000027131	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	positive regulation of B cell proliferation	acts_upstream_of_or_within	ISO	RGD:1316446	1624291	MGI:5642299 PMID:25074919	RGD	PMID:25074919
Slc39a10	Rat	positive regulation of B cell proliferation	acts_upstream_of_or_within	IEA	UniProtKB:Q6P5F6\|ensembl:ENSMUSP00000027131	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	positive regulation of B cell receptor signaling pathway	acts_upstream_of_or_within	ISO	RGD:1316446	1624291	MGI:5642299 PMID:25074919	RGD	PMID:25074919
Slc39a10	Rat	positive regulation of B cell receptor signaling pathway	acts_upstream_of_or_within	IEA	UniProtKB:Q6P5F6\|ensembl:ENSMUSP00000027131	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	transmembrane transport	involved_in	IEA	InterPro:IPR003689	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Slc39a10	Rat	zinc ion import across plasma membrane	involved_in	IBA	FB:FBgn0036461\|MGI:1914515\|MGI:1914797\|MGI:2139274\|PANTHER:PTN000953562\|RGD:1308236\|UniProtKB:Q13433\|UniProtKB:Q15043\|UniProtKB:Q9C0K1\|ZFIN:ZDB-GENE-030131-3023	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc39a10	Rat	zinc ion import across plasma membrane	acts_upstream_of_or_within	IEA	UniProtKB:Q6P5F6\|ensembl:ENSMUSP00000027131	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	zinc ion import across plasma membrane	acts_upstream_of_or_within	ISO	RGD:1316446	1624291	PMID:25074913	RGD	PMID:25074913
Slc39a10	Rat	zinc ion transmembrane transport	involved_in	ISO	RGD:1316445	1624291	PMID:27274087, PMID:30520657	RGD	PMID:27274087\|PMID:30520657
Slc39a10	Rat	zinc ion transmembrane transport	involved_in	IEA	UniProtKB:Q9ULF5\|ensembl:ENSP00000352655	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc39a10	Rat	apical plasma membrane	located_in	IEA	UniProtKB:Q9ULF5\|ensembl:ENSP00000352655	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	apical plasma membrane	located_in	IEA	UniProtKB:Q6P5F6\|ensembl:ENSMUSP00000027131	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	apical plasma membrane	located_in	ISO	RGD:1316445	1624291	PMID:30520657	RGD	PMID:30520657
Slc39a10	Rat	apical plasma membrane	located_in	ISO	RGD:1316446	1624291	PMID:30520657	RGD	PMID:30520657
Slc39a10	Rat	membrane	located_in	IEA	UniProtKB-SubCell:SL-0162	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Slc39a10	Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Slc39a10	Rat	membrane	located_in	IEA	InterPro:IPR003689	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Slc39a10	Rat	plasma membrane	located_in	ISO	RGD:1316446	1624291	PMID:25074919	RGD	PMID:25074919
Slc39a10	Rat	plasma membrane	located_in	IEA	UniProtKB:Q6P5F6\|ensembl:ENSMUSP00000027131	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	plasma membrane	located_in	IEA	UniProtKB:Q9ULF5\|ensembl:ENSP00000352655	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	plasma membrane	is_active_in	IBA	FB:FBgn0024236\|FB:FBgn0036461\|MGI:1914515\|MGI:1914797\|MGI:1919277\|MGI:1919336\|MGI:2139274\|MGI:2384851\|PANTHER:PTN000953562\|RGD:1304664\|RGD:1308236\|UniProtKB:Q13433\|UniProtKB:Q15043\|UniProtKB:Q6P5W5\|UniProtKB:Q9C0K1\|UniProtKB:Q9ULF5\|ZFIN:ZDB-GENE-060315-2	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc39a10	Rat	plasma membrane	located_in	ISO	RGD:1316445	1624291	PMID:27274087	RGD	PMID:27274087

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc39a10	Rat	metal ion transmembrane transporter activity	enables	IEA	InterPro:IPR003689	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Slc39a10	Rat	monoatomic cation:bicarbonate symporter activity	enables	IBA	MGI:1914797\|PANTHER:PTN000953562\|RGD:1308236\|UniProtKB:Q15043\|UniProtKB:Q9C0K1	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc39a10	Rat	protein binding	enables	ISO	RGD:1316445	1624291	UniProtKB:Q13433 PMID:27274087	RGD	PMID:27274087
Slc39a10	Rat	protein binding	enables	ISO	RGD:1316446	1624291	UniProtKB:P13595\|UniProtKB:Q8C145\|UniProtKB:Q9WV60 PMID:27274087, PMID:28098160	RGD	PMID:27274087\|PMID:28098160
Slc39a10	Rat	protein tyrosine phosphatase activator activity	enables	ISO	RGD:1316446	1624291	MGI:5642299 PMID:25074919	RGD	PMID:25074919
Slc39a10	Rat	protein tyrosine phosphatase activator activity	enables	IEA	UniProtKB:Q6P5F6\|ensembl:ENSMUSP00000027131	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	zinc ion transmembrane transporter activity	enables	IEA	UniProtKB:Q9ULF5\|ensembl:ENSP00000352655	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	zinc ion transmembrane transporter activity	enables	IEA	UniProtKB:Q6P5F6\|ensembl:ENSMUSP00000027131	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc39a10	Rat	zinc ion transmembrane transporter activity	enables	ISO	RGD:1316446	1624291	MGI:5642299 PMID:25074919	RGD	PMID:25074919
Slc39a10	Rat	zinc ion transmembrane transporter activity	enables	IBA	FB:FBgn0024236\|FB:FBgn0036461\|MGI:1914515\|MGI:1914797\|MGI:1919277\|MGI:1919336\|MGI:2139274\|MGI:2384851\|PANTHER:PTN000953562\|RGD:1308236\|UniProtKB:Q13433\|UniProtKB:Q15043\|UniProtKB:Q6P5W5\|UniProtKB:Q9ULF5\|ZFIN:ZDB-GENE-030131-3023\|ZFIN:ZDB-GENE-040426-1157	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc39a10	Rat	zinc ion transmembrane transporter activity	enables	ISO	RGD:1316445	1624291	PMID:27274087, PMID:30520657	RGD	PMID:27274087\|PMID:30520657

Disease Annotations Click to see Annotation Detail View

Neoplasm Invasiveness (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dimethylhydrazine (EXP)

1,3-dicyclohexylcarbodiimide (EXP)

1-benzylpiperazine (EXP)

17beta-estradiol (EXP,ISO)

17beta-estradiol 3-benzoate (EXP)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,4'-trichlorobiphenyl (ISO)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrolein (ISO)

acrylamide (ISO)

actinomycin D (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

amitrole (EXP)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (EXP)

Azoxymethane (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium atom (EXP,ISO)

cadmium dichloride (EXP,ISO)

cadmium sulfate (ISO)

calcitriol (ISO)

cannabidiol (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

cobalt dichloride (EXP)

cocaine (EXP)

coumarin (ISO)

cyclosporin A (ISO)

dextran sulfate (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

flusilazole (EXP)

FR900359 (ISO)

gadodiamide hydrate (ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

inulin (ISO)

ivermectin (ISO)

lead diacetate (ISO)

lipopolysaccharide (ISO)

mercaptoethanol (EXP)

methimazole (EXP)

methotrexate (ISO)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

motexafin gadolinium (ISO)

N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine (ISO)

nickel dichloride (EXP)

ochratoxin A (ISO)

ozone (ISO)

p-chloromercuribenzoic acid (ISO)

paracetamol (EXP,ISO)

PCB138 (ISO)

pentetic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

potassium chromate (ISO)

quercetin (ISO)

rimonabant (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

tebufenpyrad (ISO)

temozolomide (ISO)

testosterone (EXP)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valdecoxib (EXP)

valproic acid (EXP,ISO)

zidovudine (ISO)

zinc acetate (ISO)

zinc atom (EXP,ISO)

zinc dichloride (ISO)

zinc sulfate (EXP)

zinc(0) (EXP,ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

bicarbonate transport (IEA)

epithelial to mesenchymal transition (IEA,ISO)

intracellular monoatomic cation homeostasis (IBA)

intracellular zinc ion homeostasis (IEA,ISO)

metal ion transport (IEA)

negative regulation of B cell apoptotic process (IEA,ISO)

positive regulation of B cell proliferation (IEA,ISO)

positive regulation of B cell receptor signaling pathway (IEA,ISO)

transmembrane transport (IEA)

zinc ion import across plasma membrane (IBA,IEA,ISO)

zinc ion transmembrane transport (IEA,ISO)

Cellular Component

apical plasma membrane (IEA,ISO)

membrane (IEA)

plasma membrane (IBA,IEA,ISO)

Molecular Function

metal ion transmembrane transporter activity (IEA)

monoatomic cation:bicarbonate symporter activity (IBA)

protein binding (ISO)

protein tyrosine phosphatase activator activity (IEA,ISO)

zinc ion transmembrane transporter activity (IBA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:25074913	PMID:25074919	PMID:33742346

Genomics

Comparative Map Data

Slc39a10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	62,331,281 - 62,454,754 (+)	NCBI		GRCr8
mRatBN7.2	9	54,836,841 - 54,960,325 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	54,876,141 - 54,960,325 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	63,415,252 - 63,464,475 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	68,531,028 - 68,580,251 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	66,826,876 - 66,876,105 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	59,947,562 - 60,070,549 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	60,021,534 - 60,070,552 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	59,634,923 - 59,758,222 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	52,168,107 - 52,217,677 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	52,169,481 - 52,216,722 (+)	NCBI
Celera	9	52,413,746 - 52,463,043 (+)	NCBI		Celera
Cytogenetic Map	9	q31	NCBI

SLC39A10
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	195,613,029 - 195,737,700 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	195,575,977 - 195,737,702 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	196,521,682 - 196,602,424 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	196,230,184 - 196,310,663 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	190,277,406 - 190,358,291 (+)	NCBI		Celera
Cytogenetic Map	2	q32.3	NCBI
HuRef	2	188,374,467 - 188,455,230 (+)	NCBI		HuRef
CHM1_1	2	196,527,823 - 196,608,722 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	196,097,362 - 196,222,040 (+)	NCBI		T2T-CHM13v2.0

Slc39a10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	46,846,704 - 46,964,952 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	46,846,704 - 46,932,012 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	46,807,544 - 46,925,776 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	46,807,544 - 46,892,852 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	46,864,389 - 46,910,354 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	46,752,090 - 46,798,055 (-)	NCBI		MGSCv36	mm8
Celera	1	47,145,316 - 47,190,906 (-)	NCBI		Celera
Cytogenetic Map	1	C1.1	NCBI
cM Map	1	24.07	NCBI

Slc39a10
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955403	4,426,538 - 4,479,693 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC39A10
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	98,199,554 - 98,357,975 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	98,214,541 - 98,372,965 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	82,823,472 - 82,981,894 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	200,736,327 - 200,883,524 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	200,805,459 - 200,883,524 (+)	Ensembl	panpan1.1		panPan2

SLC39A10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	5,482,200 - 5,521,104 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	5,482,177 - 5,521,110 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	6,325,793 - 6,462,496 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	5,271,185 - 5,408,052 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	5,270,867 - 5,408,045 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	5,272,054 - 5,408,755 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	5,244,321 - 5,380,948 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	5,260,580 - 5,397,312 (+)	NCBI		UU_Cfam_GSD_1.0

Slc39a10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	153,412,914 - 153,539,813 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936506	3,298,245 - 3,396,291 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936506	3,298,259 - 3,425,126 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC39A10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	99,584,872 - 99,724,611 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	99,584,830 - 99,724,621 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

SLC39A10
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	81,143,658 - 81,273,010 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	81,187,587 - 81,273,749 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	118,172,530 - 118,298,973 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc39a10
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624854	1,163,025 - 1,280,717 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Slc39a10
711 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	156
Count of miRNA genes:	124
Interacting mature miRNAs:	133
Transcripts:	ENSRNOT00000016262
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	32535505	77535505	Rat
1300180	Bw14	Body weight QTL 14	3.776		body mass (VT:0001259)	body weight (CMO:0000012)	9	23754024	61381613	Rat
11353957	Bmd92	Bone mineral density QTL 92		0.01	tibia mineral mass (VT:1000283)	volumetric bone mineral density (CMO:0001553)	9	46114199	91114199	Rat
631680	Cm11	Cardiac mass QTL 11	3.1	0.00089	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	9	20430519	65430519	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	25268044	79271759	Rat
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	25268044	114175309	Rat
7207805	Bmd88	Bone mineral density QTL 88	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	9	23754024	58157242	Rat
631643	Bp120	Blood pressure QTL 120	3	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	22071200	67071200	Rat
12879506	Pur33	Proteinuria QTL 33			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	44649921	89649921	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	25661188	100929786	Rat
1598849	Memor17	Memory QTL 17	2.2		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	49968546	71098346	Rat
10058949	Gmadr5	Adrenal mass QTL 5	2	0.014	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	9	42791513	87976209	Rat
631656	Bp108	Blood pressure QTL 108	5.97	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	48598251	93598251	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	36962359	92058970	Rat
61352	Bp34	Blood pressure QTL 34	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	42495343	79271511	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	36962359	77814038	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	22071169	86369743	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	23754144	83851531	Rat
6903941	Pur31	Proteinuria QTL 31		0.036	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	9	40194188	85194188	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	36962359	95410867	Rat
11353949	Bp393	Blood pressure QTL 393			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	40194188	85194188	Rat
11353951	Bp394	Blood pressure QTL 394			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	44649921	89649921	Rat
10054125	Srcrt7	Stress Responsive Cort QTL 7	3.33	0.0011	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	9	1	87073594	Rat
1331757	Cdexp1	CD45RC expression in CD8 T cells QTL 1	4.3		CD8-positive T cell quantity (VT:0008077)	blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)	9	1024537	67509080	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	32535505	77535505	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	27468639	72468639	Rat

Markers in Region

RH127346

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	54,960,485 - 54,960,700 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	60,070,710 - 60,070,924	NCBI	Rnor6.0
Rnor_5.0	9	59,758,383 - 59,758,597	UniSTS	Rnor5.0
RGSC_v3.4	9	52,217,942 - 52,218,156	UniSTS	RGSC3.4
Celera	9	52,463,204 - 52,463,418	UniSTS
Cytogenetic Map	9	q22	UniSTS

RH143016

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	54,957,917 - 54,958,028 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	60,068,142 - 60,068,252	NCBI	Rnor6.0
Rnor_5.0	9	59,755,815 - 59,755,925	UniSTS	Rnor5.0
RGSC_v3.4	9	52,215,374 - 52,215,484	UniSTS	RGSC3.4
Celera	9	52,460,636 - 52,460,746	UniSTS
Cytogenetic Map	9	q22	UniSTS

BF413432

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	54,929,310 - 54,929,421 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	60,039,891 - 60,040,001	NCBI	Rnor6.0
Rnor_5.0	9	59,727,564 - 59,727,674	UniSTS	Rnor5.0
RGSC_v3.4	9	52,186,769 - 52,186,879	UniSTS	RGSC3.4
Celera	9	52,432,055 - 52,432,165	UniSTS
Cytogenetic Map	9	q22	UniSTS

RH137127

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	54,912,720 - 54,912,901 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	60,023,253 - 60,023,433	NCBI	Rnor6.0
Rnor_5.0	9	59,710,926 - 59,711,106	UniSTS	Rnor5.0
RGSC_v3.4	9	52,169,266 - 52,169,446	UniSTS	RGSC3.4
Celera	9	52,415,465 - 52,415,645	UniSTS
Cytogenetic Map	9	q22	UniSTS

DNAH7__4760

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	54,960,253 - 54,960,666 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	60,070,478 - 60,070,890	NCBI	Rnor6.0
Rnor_5.0	9	59,758,151 - 59,758,563	UniSTS	Rnor5.0
RGSC_v3.4	9	52,217,710 - 52,218,122	UniSTS	RGSC3.4
Celera	9	52,462,972 - 52,463,384	UniSTS
Cytogenetic Map	9	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000016262 ⟹ ENSRNOP00000016262

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	54,876,141 - 54,960,325 (+)	Ensembl
Rnor_6.0 Ensembl	9	60,039,297 - 60,070,552 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093343

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	9	60,049,001 - 60,050,443 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093748 ⟹ ENSRNOP00000076105

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	54,911,002 - 54,960,325 (+)	Ensembl
Rnor_6.0 Ensembl	9	60,021,534 - 60,068,488 (+)	Ensembl

RefSeq Acc Id:

NM_001108796 ⟹ NP_001102266

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	62,405,433 - 62,454,754 (+)	NCBI
mRatBN7.2	9	54,911,002 - 54,960,325 (+)	NCBI
Rnor_6.0	9	60,021,534 - 60,070,549 (+)	NCBI
RGSC_v3.4	9	52,168,107 - 52,217,677 (+)	RGD
Celera	9	52,413,746 - 52,463,043 (+)	NCBI

Sequence:

show sequence

CTAATTGATCTCTCCGAAACTCTGGCCTAGGACGCTCGCTTTCCGGGCTTCTATGTCTCATCCG
CTAGCCCAAGGCCTCAGCAACCTACGTGCGAGGCCAGGAGAGGCGACCAAGGCCGCTCCACGCA
TGCGTTAGAAGCCGCCCCAACTGCCCCCAAGGAGTCCTTTCTCCGAACAAAACTAGCGCGGAGC
TACAGGGCTCCGCAACTTGCGTAGATATAATTTCTTCCAGTTCCGCCTGCCGGTGTAGCTCCCC
CGGTGCCGCGGCTCTCCTACGCCAGGCGCGTCCGCGAAGTGGATGGCTGGACGCTGCGAGTGCG
CCGCCGGCGTAGCGCTGATCAGGCCGAGGTGCGACTGCGCAGGGCACCCGAGAGGGCTGGGTGC
GCCGCTGGCGTAGAGCTGAGGCAGCCAGGGTGCGGCTGCGCAGGGCGCCAGAACAGACTGAGTG
CGCCGCCGGCGTAGAGCGCCGGCTCGCGCACTAGGCTCCGCGACGCAGATAGCGCAGGCGGCTT
TGGAGAATACACGACTGGGTGCAGCCGGGGTTTGGTACCGAGCGGAGAGGAGATGCACACGGCA
CTCGAGTGTGAGGAAAAGTAGAGATGAAGGTGCATATACACACAAAATTCTGTCTCATCTGTTT
GCTGACGTTTATTTTCCATCATTGCAACCACTGCCATGAAGACCATGACCATGGCCCCGAGGAG
CTTCACAGGCACCACCGTGGAATGACAGAGTCAGAGTCAAGCACATTTTCAGTGCAGGATGCTG
AAAATGAAAAAAAGTACTATATTGAAAAACTGTTTGACCGTTACGGTGAAAATGGAAGATTATC
CTTTTTCGGTCTGGAGAAACTTTTAACAAACTTGGGCCTTGGAGAGATCAAAGTCGTTGAGATT
AATCATGAGGACCTTGGCCATGATCATGTTTCTCACTTAGACATTCTGGCCGTTCAAGAGGGAA
AGCATTTCCACTCCCATAACCACCAGCATTTTCACAATCATTTAAATGCAGAAAACCACACTGC
GACCAGTATAACATCAAAAAGAAACCACAAGTGTGATCCAGAGAGAGAGGCAGCTGAAGTGCCC
ATCAAACCCGAGGATAAACACCCGCACGACCGCAATCACCGCTTCCATCATCGCCATCGTTTGC
ATCATCACCTGGACCATAACACCACTCGGCGGGTTCACAATGACTCCATCGCTCACAGCGAGCA
TGGGGAGCCGGGTCACGGCCCTTCAACAGAGACCAATAAAACACAAGAACAATCTGAAGTGAAG
TCAGGGAAGGTCAGGAGGAAGGAAAAAGGGAAGAGGAAAAAGGAAAACTCTGAGGTTAACACAC
CAGGTTTCCTCCCCACCCATGGTCACGGTGAACAATATGAGCATAATCGGGTTCACAAACTTGA
CCGTGTACATAGCCCGGGCCATCCTCATGCACATCTTCCCGAGCACAGTGGCCATGAGCTTGGC
CATGGACACCAAGAATTTGATCCTGATAATGAAGGTGAACTTCGACATACTCGAAAGCGAGAAG
CACCACATGTTAAAAAAAGTGCAATTTATTCCACTCCTAGCCACAAAGACCACAATGAAGATGA
CCGCCAACATGAATGTTTGAACGTCACTCAGTTGTTAAAGCACTTTGGCCTGGGTCCCAGCTCC
CCCATCTCGCCTGATCTATTCACATACCTTTGCCCGGCCTTGCTGTACCAGATCGACAGCAGAC
TTTGTATTGAACATTTTGACAAACTTTTAGTTGAAGATTTAAATAAGGATAAAGCTCTGGTTCC
TGAAGATAAGGCAAACATAGGGGCATCAGCGTGGATCTGTGGCATCATCTCCATCACCGTTATT
AGTCTGCTCTCCTTGCTGGGTGTGATTTTGGTTCCCATCATCAACCAAGGATGCTTCAAATTCC
TTCTCACGTTCCTCGTTGCGCTAGCTGTAGGAACAATGAGTGGAGACGCCCTTCTGCATCTACT
GCCCCATTCTCAGGGCGGACATGACCACAGTCATCAGCATGCTCACGGGCATGGTCATTCACAT
GGACATGAATCTAAGAAGTTTCTGGAAGAATATGATGCTGTGTTGAAAGGACTTGTTGCACTAG
GAGGCATTTACTTACTGTTCATCATCGAGCACTGCATCCGGATGTTTAAGCACTACAAGCAGCA
ACGAGGAAAGCAGAAATGGTTTATGAAGCAGAGTACAGAAGAATCAACTATTGGAAGAAAGCTT
TCAGATCATAAGTTAAACAGCACACCGGATGCTGACTGGCTGCAACTCAAGCCCCTTGCTGGAA
CAGATGACTCGGTGGTTTCTGAAGACCGACTTAATGAGACCGAACTGACTGATTTAGAAGCCCA
ACAAGAATCCCCTCCTAAAAATTACCTTGGTGTAGAGGAAGAGAAAATCATGGACCATTCTCAC
AGTGATGGATTGCACACCATTCATGAGCACGAGGTCCATGTAGTCTCTCATAACCACCGCGATG
AGGAGGATACAGCTGTGCTGAGGAAGCATGGCCACCAGTGGCACCACCGACACGCCCACCATTC
CCACGGGCCCTGCCACTCTGGCTCAGACCTGAAGGAAACAGGAATAGCCAACATAGCCTGGATG
GTGATCATGGGGGACGGCATCCACAACTTCAGTGATGGCCTCGCCATTGGGGCAGCTTTCAGTG
CCGGGCTGACTGGAGGCATCAGCACTTCCATAGCCGTCTTCTGCCATGAACTGCCACACGAGTT
AGGTGATTTTGCAGTTCTTCTGAAAGCAGGCATGACCGTAAAGCAAGCCATTGTGTACAACCTG
CTGTCTGCCATGATGGCTTACATAGGAATGCTCATAGGCACGGCTGTCGGTCAGTACGCCAACA
ACATCACACTCTGGATCTTCGCGATCACGGCAGGCATGTTCCTCTACGTGGCCTTGGTGGATAT
GCTTCCAGAGATGCTGCATGGAGATGGCGACCACGAGGAGCACGGCTTCTGTCCAGTTGGGCAG
TTCATTCTTCAGAATCTAGGACTGCTGTTTGGATTCGCCCTCATGCTGGTTATCGCCCTCTACG
AAGACAGAATCGTGTTTGACATCCAGTTCTGACCATCCCGGTCTCTGCCGATTCCGAGAATGTC
CGTGCAGCTTGCCTCTGCCCCTTGTACTGTATGCACATCGCTCAGAGAATCCAGTGGCCTGCAC
TGTCCACAGGTTCTGTAGGTTTGAGCCTAACCACAAAAGACTGGTGCTCAGGACTGTTTTCTCT
GCATGGATGGGTCTTTTAAAAGTTTGTGATAAAGTCAGAACATGGGACTCCATGTACCAATATT
GATAGAAGTTTAAGACTTTAAAAAAAGAGAGAATCATATAAAACACTAGTCTTTTTATTAGTAG
AAACTTCTGTGGCTATGCAGAAATAGAAATTAAACCAAAAAAAATCATTTAAACTTTAAAAATA
TTTTAAATGGACTTTGAGCAGACATTTTTGTGTGCGTGCTAAGAATGAATTTTAGTGCCCTCTA
ATTCAGCTACATATATACATGTGGGACTAATAGGGATCAACTTGACACAACTTGGAAACTGAAT
AAAGTTGACTTTAGGAACTAGAGGGAAGCCCAGGCTGCACTAGAGTATGGATTTAGCATTGGGG
AAAGCCCTTATTCTTGAATCTAGAGTTACTATTTTTGTATATATTTGCATAGTGTTCAAACTTG
CGGCCTAAACTACTGAAATTTGTGATTGTATGTGTGAACTTCAGTTTAATCGAAGAGTCATAAT
GGTTCTTTGCATACTATATTTGGTGTTGGGTTTTCTTTTTAACTTTGTTTTTATGGGGGGTGTG
AGTCAGAGCATGGAGTCAGTACCTTTTTCTTAACATTACTGCTCTCGGAAATATCAAAGAAGTG
GCATTCCATTTCCCTAGGACTAACTAGGTTAATTGGAAATTTTTAAGTTCTGGGTGTTCAAGTT
ACTTTACCAGTTTGGCATTGGAACTCAGAGCACATGCTGTGGCTGGTAGTAAAATCCAAGCTCG
CCATGCCTGTAGTCTGTATATAAAACGTCGGCTAAATGGTAACTACACCGGTACCATAGCTGCT
TTGGTACCGAGTATATGACTAAGCCAAAATCACTTTTATCATTTTGTGCCAAGATACACTGTCG
GTGCCTGATCCGGAATGGTCTGTGTTTGGGTGCCTGCTCTTACGCCACTGGTGCAGTGACGTGT
AAGACGTCTAAGTCCTGTTCCGTATGAAGCGTGACTCGGCGTGTAGACTAGTCATGTGCATAGC
TCTGTTTACATCCCGCACCACCCACTCTTCCCTCACGCAGGCAAACGTCGGAACCGTGTGCAGC
TAGCTCTATTTTAACTGCTTGGCAGCTGGGACACTCCTTGGGAAAAATACATAAGAGCCAAAAC
TTGTCCATTCCATTTTAAATATTTGTATTCAGTCCCTTCTCCAGTTCTCTTCCTCTTACTCTGA
TTTTTTTTTTCAGACAAAAACAAAAAATTAAGAGTAGCGCATGCATGCAGGTGTTGGAGGCTAA
TCTCCAGTTCTGTTGTGTTCTAAGCGAGGGCTGTTCGTTCTTACAGCAGTTGCCTCTTTCCTCT
GTTGTGTTCTAAGCGAGGGCTGTTCGTTCTTACAGCAGTCGCCTCTCCCCAGCCCTCCTTGCAC
TAAGTACTTTGGTACGCAGGCTTTCAGCACTGGGCAAGCCTACAGCAGTCCTTACTTCCCCTCA
TTGTTGGCCGTTTGAGCAGCCTCACTGAAAGGTGCTGGTGCACTCCGTGCTGTCGACTTCAAGT
GACTTGGAAATTTTGCTTTCAAAACCAAGATACGCTTATGCTTCACTTTTGAGTTTTATTCCCA
AGGAGGATTGTACATTCCAGCATTAAATCTGCTTCATTTAAAATAACAGCGGGAACATACTCCC
ACTCTAAAATGCCTCACTTAAAAAGCTGGTCGGTTATGCTTACAGTATACAAAGTTTTATATTC
TCAGACGGTATTATCTTTACGTGCTAGATTTTCTTAGTCGTTTCGGAGGGCTTTAACAGTGGCT
GCTAATATTTTGATAGTGTTCCACCAGTGTTTAGTTTTTACATCATTCTCGTGTATAGTTTCAG
GTCTCACTAGACAATCCCAATTCCACTACATTTCTTTTTGGCTCCAACATTCCACTTAGCTTGA
CTAGTCTAATTTTAACATATGCCTGTTGGAGGTCACCAATGTTACTTGTACAATGCTGTCACCA
TGTGACATCCATATGGATTTTGGTGTATATCACATTGCATTCAATCAGCTGTGATTATGCTTAG
AAATACTATAGTAACTAGATGCAGTGTGAACCTTTTCCATTAACAGTAAGTCAGTGGCTTAAAT
GTGATTATGGTCCTGCAAGGTGATACTTGCTAAAATATCTAGACATTTTTTGTTGTTGTAACTG
AATCATTTTTTTTTAAATTTATAAAGCTGGAAGTGATCAAATGCTGTTTTTTTTTCATTGTCAA
CAGTGGTGTGTCATTTTATATATGTTCCTAATGCTTACGGAACTCTCCCGAAATAAAGTTATTC
AGAAAGAAA

hide sequence

RefSeq Acc Id:

XM_006244936 ⟹ XP_006244998

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	62,370,146 - 62,454,754 (+)	NCBI
mRatBN7.2	9	54,876,044 - 54,960,312 (+)	NCBI
Rnor_6.0	9	59,986,123 - 60,070,549 (+)	NCBI
Rnor_5.0	9	59,634,923 - 59,758,222 (+)	NCBI

Sequence:

show sequence

GACTCAACTTACCTCCCAACAGATGAAGTTAAGCAGGTCCAGAACGTGGATTGACTTGTTTTAT
GATTCGAGGTTCTGATGGAAAAGTAGAGATGAAGGTGCATATACACACAAAATTCTGTCTCATC
TGTTTGCTGACGTTTATTTTCCATCATTGCAACCACTGCCATGAAGACCATGACCATGGCCCCG
AGGAGCTTCACAGGCACCACCGTGGAATGACAGAGTCAGAGTCAAGCACATTTTCAGTGCAGGA
TGCTGAAAATGAAAAAAAGTACTATATTGAAAAACTGTTTGACCGTTACGGTGAAAATGGAAGA
TTATCCTTTTTCGGTCTGGAGAAACTTTTAACAAACTTGGGCCTTGGAGAGATCAAAGTCGTTG
AGATTAATCATGAGGACCTTGGCCATGATCATGTTTCTCACTTAGACATTCTGGCCGTTCAAGA
GGGAAAGCATTTCCACTCCCATAACCACCAGCATTTTCACAATCATTTAAATGCAGAAAACCAC
ACTGCGACCAGTATAACATCAAAAAGAAACCACAAGTGTGATCCAGAGAGAGAGGCAGCTGAAG
TGCCCATCAAACCCGAGGATAAACACCCGCACGACCGCAATCACCGCTTCCATCATCGCCATCG
TTTGCATCATCACCTGGACCATAACACCACTCGGCGGGTTCACAATGACTCCATCGCTCACAGC
GAGCATGGGGAGCCGGGTCACGGCCCTTCAACAGAGACCAATAAAACACAAGAACAATCTGAAG
TGAAGTCAGGGAAGGTCAGGAGGAAGGAAAAAGGGAAGAGGAAAAAGGAAAACTCTGAGGTTAA
CACACCAGGTTTCCTCCCCACCCATGGTCACGGTGAACAATATGAGCATAATCGGGTTCACAAA
CTTGACCGTGTACATAGCCCGGGCCATCCTCATGCACATCTTCCCGAGCACAGTGGCCATGAGC
TTGGCCATGGACACCAAGAATTTGATCCTGATAATGAAGGTGAACTTCGACATACTCGAAAGCG
AGAAGCACCACATGTTAAAAAAAGTGCAATTTATTCCACTCCTAGCCACAAAGACCACAATGAA
GATGACCGCCAACATGAATGTTTGAACGTCACTCAGTTGTTAAAGCACTTTGGCCTGGGTCCCA
GCTCCCCCATCTCGCCTGATCTATTCACATACCTTTGCCCGGCCTTGCTGTACCAGATCGACAG
CAGACTTTGTATTGAACATTTTGACAAACTTTTAGTTGAAGATTTAAATAAGGATAAAGCTCTG
GTTCCTGAAGATAAGGCAAACATAGGGGCATCAGCGTGGATCTGTGGCATCATCTCCATCACCG
TTATTAGTCTGCTCTCCTTGCTGGGTGTGATTTTGGTTCCCATCATCAACCAAGGATGCTTCAA
ATTCCTTCTCACGTTCCTCGTTGCGCTAGCTGTAGGAACAATGAGTGGAGACGCCCTTCTGCAT
CTACTGCCCCATTCTCAGGGCGGACATGACCACAGTCATCAGCATGCTCACGGGCATGGTCATT
CACATGGACATGAATCTAAGAAGTTTCTGGAAGAATATGATGCTGTGTTGAAAGGACTTGTTGC
ACTAGGAGGCATTTACTTACTGTTCATCATCGAGCACTGCATCCGGATGTTTAAGCACTACAAG
CAGCAACGAGGAAAGCAGAAATGGTTTATGAAGCAGAGTACAGAAGAATCAACTATTGGAAGAA
AGCTTTCAGATCATAAGTTAAACAGCACACCGGATGCTGACTGGCTGCAACTCAAGCCCCTTGC
TGGAACAGATGACTCGGTGGTTTCTGAAGACCGACTTAATGAGACCGAACTGACTGATTTAGAA
GCCCAACAAGAATCCCCTCCTAAAAATTACCTTGGTGTAGAGGAAGAGAAAATCATGGACCATT
CTCACAGTGATGGATTGCACACCATTCATGAGCACGAGGTCCATGTAGTCTCTCATAACCACCG
CGATGAGGAGGATACAGCTGTGCTGAGGAAGCATGGCCACCAGTGGCACCACCGACACGCCCAC
CATTCCCACGGGCCCTGCCACTCTGGCTCAGACCTGAAGGAAACAGGAATAGCCAACATAGCCT
GGATGGTGATCATGGGGGACGGCATCCACAACTTCAGTGATGGCCTCGCCATTGGGGCAGCTTT
CAGTGCCGGGCTGACTGGAGGCATCAGCACTTCCATAGCCGTCTTCTGCCATGAACTGCCACAC
GAGTTAGGTGATTTTGCAGTTCTTCTGAAAGCAGGCATGACCGTAAAGCAAGCCATTGTGTACA
ACCTGCTGTCTGCCATGATGGCTTACATAGGAATGCTCATAGGCACGGCTGTCGGTCAGTACGC
CAACAACATCACACTCTGGATCTTCGCGATCACGGCAGGCATGTTCCTCTACGTGGCCTTGGTG
GATATGCTTCCAGAGATGCTGCATGGAGATGGCGACCACGAGGAGCACGGCTTCTGTCCAGTTG
GGCAGTTCATTCTTCAGAATCTAGGACTGCTGTTTGGATTCGCCCTCATGCTGGTTATCGCCCT
CTACGAAGACAGAATCGTGTTTGACATCCAGTTCTGACCATCCCGGTCTCTGCCGATTCCGAGA
ATGTCCGTGCAGCTTGCCTCTGCCCCTTGTACTGTATGCACATCGCTCAGAGAATCCAGTGGCC
TGCACTGTCCACAGGTTCTGTAGGTTTGAGCCTAACCACAAAAGACTGGTGCTCAGGACTGTTT
TCTCTGCATGGATGGGTCTTTTAAAAGTTTGTGATAAAGTCAGAACATGGGACTCCATGTACCA
ATATTGATAGAAGTTTAAGACTTTAAAAAAAGAGAGAATCATATAAAACACTAGTCTTTTTATT
AGTAGAAACTTCTGTGGCTATGCAGAAATAGAAATTAAACCAAAAAAAATCATTTAAACTTTAA
AAATATTTTAAATGGACTTTGAGCAGACATTTTTGTGTGCGTGCTAAGAATGAATTTTAGTGCC
CTCTAATTCAGCTACATATATACATGTGGGACTAATAGGGATCAACTTGACACAACTTGGAAAC
TGAATAAAGTTGACTTTAGGAACTAGAGGGAAGCCCAGGCTGCACTAGAGTATGGATTTAGCAT
TGGGGAAAGCCCTTATTCTTGAATCTAGAGTTACTATTTTTGTATATATTTGCATAGTGTTCAA
ACTTGCGGCCTAAACTACTGAAATTTGTGATTGTATGTGTGAACTTCAGTTTAATCGAAGAGTC
ATAATGGTTCTTTGCATACTATATTTGGTGTTGGGTTTTCTTTTTAACTTTGTTTTTATGGGGG
GTGTGAGTCAGAGCATGGAGTCAGTACCTTTTTCTTAACATTACTGCTCTCGGAAATATCAAAG
AAGTGGCATTCCATTTCCCTAGGACTAACTAGGTTAATTGGAAATTTTTAAGTTCTGGGTGTTC
AAGTTACTTTACCAGTTTGGCATTGGAACTCAGAGCACATGCTGTGGCTGGTAGTAAAATCCAA
GCTCGCCATGCCTGTAGTCTGTATATAAAACGTCGGCTAAATGGTAACTACACCGGTACCATAG
CTGCTTTGGTACCGAGTATATGACTAAGCCAAAATCACTTTTATCATTTTGTGCCAAGATACAC
TGTCGGTGCCTGATCCGGAATGGTCTGTGTTTGGGTGCCTGCTCTTACGCCACTGGTGCAGTGA
CGTGTAAGACGTCTAAGTCCTGTTCCGTATGAAGCGTGACTCGGCGTGTAGACTAGTCATGTGC
ATAGCTCTGTTTACATCCCGCACCACCCACTCTTCCCTCACGCAGGCAAACGTCGGAACCGTGT
GCAGCTAGCTCTATTTTAACTGCTTGGCAGCTGGGACACTCCTTGGGAAAAATACATAAGAGCC
AAAACTTGTCCATTCCATTTTAAATATTTGTATTCAGTCCCTTCTCCAGTTCTCTTCCTCTTAC
TCTGATTTTTTTTTTCAGACAAAAACAAAAAATTAAGAGTAGCGCATGCATGCAGGTGTTGGAG
GCTAATCTCCAGTTCTGTTGTGTTCTAAGCGAGGGCTGTTCGTTCTTACAGCAGTTGCCTCTTT
CCTCTGTTGTGTTCTAAGCGAGGGCTGTTCGTTCTTACAGCAGTCGCCTCTCCCCAGCCCTCCT
TGCACTAAGTACTTTGGTACGCAGGCTTTCAGCACTGGGCAAGCCTACAGCAGTCCTTACTTCC
CCTCATTGTTGGCCGTTTGAGCAGCCTCACTGAAAGGTGCTGGTGCACTCCGTGCTGTCGACTT
CAAGTGACTTGGAAATTTTGCTTTCAAAACCAAGATACGCTTATGCTTCACTTTTGAGTTTTAT
TCCCAAGGAGGATTGTACATTCCAGCATTAAATCTGCTTCATTTAAAATAACAGCGGGAACATA
CTCCCACTCTAAAATGCCTCACTTAAAAAGCTGGTCGGTTATGCTTACAGTATACAAAGTTTTA
TATTCTCAGACGGTATTATCTTTACGTGCTAGATTTTCTTAGTCGTTTCGGAGGGCTTTAACAG
TGGCTGCTAATATTTTGATAGTGTTCCACCAGTGTTTAGTTTTTACATCATTCTCGTGTATAGT
TTCAGGTCTCACTAGACAATCCCAATTCCACTACATTTCTTTTTGGCTCCAACATTCCACTTAG
CTTGACTAGTCTAATTTTAACATATGCCTGTTGGAGGTCACCAATGTTACTTGTACAATGCTGT
CACCATGTGACATCCATATGGATTTTGGTGTATATCACATTGCATTCAATCAGCTGTGATTATG
CTTAGAAATACTATAGTAACTAGATGCAGTGTGAACCTTTTCCATTAACAGTAAGTCAGTGGCT
TAAATGTGATTATGGTCCTGCAAGGTGATACTTGCTAAAATATCTAGACATTTTTTGTTGTTGT
AACTGAATCATTTTTTTTTAAATTTATAAAGCTGGAAGTGATCAAATGCTGTTTTTTTTTCATT
GTCAACAGTGGTGTGTCATTTTATATATGTTCCTAATGCTTACGGAACTCTCCCGAAATAAAGT
TATTCAGAAAGAAA

hide sequence

RefSeq Acc Id:

XM_063267375 ⟹ XP_063123445

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	62,331,281 - 62,454,754 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102266	(Get FASTA)	NCBI Sequence Viewer
	XP_006244998	(Get FASTA)	NCBI Sequence Viewer
	XP_063123445	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL99073	(Get FASTA)	NCBI Sequence Viewer
	EDL99074	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000016262
	ENSRNOP00000016262.6
	ENSRNOP00000076105
	ENSRNOP00000076105.1

RefSeq Acc Id:	NP_001102266 ⟸ NM_001108796
- Peptide Label:	precursor
- UniProtKB:	A0A1W2Q626 (UniProtKB/TrEMBL), A6INY6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKVHIHTKFCLICLLTFIFHHCNHCHEDHDHGPEELHRHHRGMTESESSTFSVQDAENEKKYYI EKLFDRYGENGRLSFFGLEKLLTNLGLGEIKVVEINHEDLGHDHVSHLDILAVQEGKHFHSHNH QHFHNHLNAENHTATSITSKRNHKCDPEREAAEVPIKPEDKHPHDRNHRFHHRHRLHHHLDHNT TRRVHNDSIAHSEHGEPGHGPSTETNKTQEQSEVKSGKVRRKEKGKRKKENSEVNTPGFLPTHG HGEQYEHNRVHKLDRVHSPGHPHAHLPEHSGHELGHGHQEFDPDNEGELRHTRKREAPHVKKSA IYSTPSHKDHNEDDRQHECLNVTQLLKHFGLGPSSPISPDLFTYLCPALLYQIDSRLCIEHFDK LLVEDLNKDKALVPEDKANIGASAWICGIISITVISLLSLLGVILVPIINQGCFKFLLTFLVAL AVGTMSGDALLHLLPHSQGGHDHSHQHAHGHGHSHGHESKKFLEEYDAVLKGLVALGGIYLLFI IEHCIRMFKHYKQQRGKQKWFMKQSTEESTIGRKLSDHKLNSTPDADWLQLKPLAGTDDSVVSE DRLNETELTDLEAQQESPPKNYLGVEEEKIMDHSHSDGLHTIHEHEVHVVSHNHRDEEDTAVLR KHGHQWHHRHAHHSHGPCHSGSDLKETGIANIAWMVIMGDGIHNFSDGLAIGAAFSAGLTGGIS TSIAVFCHELPHELGDFAVLLKAGMTVKQAIVYNLLSAMMAYIGMLIGTAVGQYANNITLWIFA ITAGMFLYVALVDMLPEMLHGDGDHEEHGFCPVGQFILQNLGLLFGFALMLVIALYEDRIVFDI QF hide sequence

RefSeq Acc Id:	XP_006244998 ⟸ XM_006244936
- Peptide Label:	isoform X1
- UniProtKB:	D4A517 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIRGSDGKVEMKVHIHTKFCLICLLTFIFHHCNHCHEDHDHGPEELHRHHRGMTESESSTFSVQ DAENEKKYYIEKLFDRYGENGRLSFFGLEKLLTNLGLGEIKVVEINHEDLGHDHVSHLDILAVQ EGKHFHSHNHQHFHNHLNAENHTATSITSKRNHKCDPEREAAEVPIKPEDKHPHDRNHRFHHRH RLHHHLDHNTTRRVHNDSIAHSEHGEPGHGPSTETNKTQEQSEVKSGKVRRKEKGKRKKENSEV NTPGFLPTHGHGEQYEHNRVHKLDRVHSPGHPHAHLPEHSGHELGHGHQEFDPDNEGELRHTRK REAPHVKKSAIYSTPSHKDHNEDDRQHECLNVTQLLKHFGLGPSSPISPDLFTYLCPALLYQID SRLCIEHFDKLLVEDLNKDKALVPEDKANIGASAWICGIISITVISLLSLLGVILVPIINQGCF KFLLTFLVALAVGTMSGDALLHLLPHSQGGHDHSHQHAHGHGHSHGHESKKFLEEYDAVLKGLV ALGGIYLLFIIEHCIRMFKHYKQQRGKQKWFMKQSTEESTIGRKLSDHKLNSTPDADWLQLKPL AGTDDSVVSEDRLNETELTDLEAQQESPPKNYLGVEEEKIMDHSHSDGLHTIHEHEVHVVSHNH RDEEDTAVLRKHGHQWHHRHAHHSHGPCHSGSDLKETGIANIAWMVIMGDGIHNFSDGLAIGAA FSAGLTGGISTSIAVFCHELPHELGDFAVLLKAGMTVKQAIVYNLLSAMMAYIGMLIGTAVGQY ANNITLWIFAITAGMFLYVALVDMLPEMLHGDGDHEEHGFCPVGQFILQNLGLLFGFALMLVIA LYEDRIVFDIQF hide sequence

Ensembl Acc Id:

ENSRNOP00000016262 ⟸ ENSRNOT00000016262

Ensembl Acc Id:

ENSRNOP00000076105 ⟸ ENSRNOT00000093748

RefSeq Acc Id:	XP_063123445 ⟸ XM_063267375
- Peptide Label:	isoform X2
- UniProtKB:	A0A1W2Q626 (UniProtKB/TrEMBL), A6INY6 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A517-F1-model_v2	AlphaFold	D4A517	1-834	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307321	AgrOrtholog
BioCyc Gene	G2FUF-27559	BioCyc
Ensembl Genes	ENSRNOG00000011677	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000016262	ENTREZGENE
	ENSRNOT00000016262.8	UniProtKB/TrEMBL
	ENSRNOT00000093748	ENTREZGENE
	ENSRNOT00000093748.2	UniProtKB/TrEMBL
InterPro	ZIP	UniProtKB/TrEMBL
	ZIP_Transporter	UniProtKB/TrEMBL
KEGG Report	rno:363229	UniProtKB/TrEMBL
NCBI Gene	363229	ENTREZGENE
PANTHER	SOLUTE CARRIER FAMILY 39	UniProtKB/TrEMBL
	ZINC TRANSPORTER ZIP10	UniProtKB/TrEMBL
Pfam	Zip	UniProtKB/TrEMBL
PhenoGen	Slc39a10	PhenoGen
RatGTEx	ENSRNOG00000011677	RatGTEx
UniProt	A0A1W2Q626	ENTREZGENE, UniProtKB/TrEMBL
	A6INY6	ENTREZGENE, UniProtKB/TrEMBL
	D4A517	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-24	Slc39a10	solute carrier family 39 member 10	Slc39a10	solute carrier family 39 (zinc transporter), member 10	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2009-01-06	Slc39a10	solute carrier family 39 (zinc transporter), member 10	Slc39a10_predicted	solute carrier family 39 (zinc transporter), member 10 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Slc39a10_predicted	solute carrier family 39 (zinc transporter), member 10 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD