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Gene: Cbx6 (chromobox 6) Rattus norvegicus
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Symbol: Cbx6
Name: chromobox 6
Description: Predicted to have single-stranded RNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to localize to the PcG protein complex and heterochromatin. Orthologous to human CBX6 (chromobox 6); PARTICIPATES IN histone modification pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chromobox homolog 6; chromobox protein homolog 6; LOC315136
Orthologs:
Homo sapiens (human) : CBX6 (chromobox 6)  HGNC  Alliance
Mus musculus (house mouse) : Cbx6 (chromobox 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cbx6 (chromobox 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CBX6 (chromobox 6)
Canis lupus familiaris (dog) : CBX6 (chromobox 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cbx6 (chromobox 6)
Sus scrofa (pig) : CBX6 (chromobox 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07121,047,996 - 121,058,109 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7121,050,302 - 121,058,029 (-)Ensembl
Rnor_5.07121,038,955 - 121,049,097 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47118,062,267 - 118,070,004 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17118,096,504 - 118,104,234 (-)NCBI
Celera7107,705,925 - 107,713,664 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
  
More on Cbx6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307314
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.