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Gene: Gcat (glycine C-acetyltransferase) Rattus norvegicus
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Symbol: Gcat
Name: glycine C-acetyltransferase
Description: Predicted to have glycine C-acetyltransferase activity; ligase activity; and pyridoxal phosphate binding activity. Predicted to be involved in biosynthetic process and threonine catabolic process. Predicted to localize to the mitochondrion and nuclear speck. Orthologous to human GCAT (glycine C-acetyltransferase); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase); LOC366959; MGC109060
Orthologs:
Homo sapiens (human) : GCAT (glycine C-acetyltransferase)  HGNC  Alliance
Mus musculus (house mouse) : Gcat (glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gcat (glycine C-acetyltransferase)
Pan paniscus (bonobo/pygmy chimpanzee) : GCAT (glycine C-acetyltransferase)
Canis lupus familiaris (dog) : GCAT (glycine C-acetyltransferase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gcat (glycine C-acetyltransferase)
Sus scrofa (pig) : GCAT (glycine C-acetyltransferase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07120,263,068 - 120,269,365 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07120,254,453 - 120,290,686 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47117,003,626 - 117,010,396 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17117,037,855 - 117,044,625 (+)NCBI
Celera7106,929,404 - 106,935,689 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Gcat
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307291
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.