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Gene: Mier2 (MIER family member 2) Rattus norvegicus

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Symbol:

Mier2

Name:

MIER family member 2

RGD ID:

1307278

Description:

Predicted to enable histone deacetylase binding activity and transcription corepressor activity. Predicted to contribute to histone deacetylase activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm and nucleus. Predicted to be part of protein-containing complex. Predicted to be active in nucleoplasm. Orthologous to human MIER2 (MIER family member 2); INTERACTS WITH (+)-schisandrin B; 6-propyl-2-thiouracil; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC362841; mesoderm induction early response 1, family member 2; mesoderm induction early response protein 2; RGD1307278; similar to KIAA1193 protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MIER2 (MIER family member 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Mier2 (MIER family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mier2 (MIER family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MIER2 (MIER family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MIER2 (MIER family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mier2 (MIER family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MIER2 (MIER family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MIER2 (MIER family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mier2 (MIER family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Mier2 (MIER family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MIER2 (MIER family member 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	MIER2 (MIER family member 2)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Mier2 (MIER family member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Mier2 (MIER family member 2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mier2 (mesoderm induction early response 1, family member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mier2 (mesoderm induction early response 1, family member 2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG1620	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG1620	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F10E7.11	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F10E7.11	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	T07F8.4	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	T07F8.4	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	mier2	Alliance	DIOPT (OrthoFinder\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	10,804,238 - 10,819,979 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	10,804,268 - 10,819,979 (+)	Ensembl				GRCr8
mRatBN7.2	7	10,153,501 - 10,169,381 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	10,153,649 - 10,169,378 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	13,025,706 - 13,041,902 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	14,903,793 - 14,919,989 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	12,765,804 - 12,781,867 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	13,039,759 - 13,055,632 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	13,039,781 - 13,055,632 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	13,203,171 - 13,219,034 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	11,671,223 - 11,687,698 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	8,319,518 - 8,334,990 (+)	NCBI		Celera
RGSC_v3.1	7	11,671,241 - 11,686,518 (+)	NCBI
Cytogenetic Map	7	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenoid cystic carcinoma (ISO)

Salivary Gland Neoplasms (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

amitrole (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

caffeine (ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

cobalt dichloride (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (EXP)

dicrotophos (ISO)

fenthion (ISO)

FR900359 (ISO)

fulvestrant (ISO)

methapyrilene (ISO)

methidathion (ISO)

okadaic acid (ISO)

ozone (EXP)

paracetamol (EXP,ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin remodeling (IEA)

negative regulation of transcription by RNA polymerase II (IBA)

Cellular Component

cytoplasm (IEA,ISO)

nucleoplasm (IBA,IEA)

nucleus (IEA,ISO)

protein-containing complex (IEA,ISO)

Molecular Function

histone deacetylase activity (IEA,ISO)

histone deacetylase binding (IBA,IEA,ISO)

protein binding (ISO)

transcription corepressor activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:28046085

Genomics

Comparative Map Data

Mier2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	10,804,238 - 10,819,979 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	10,804,268 - 10,819,979 (+)	Ensembl				GRCr8
mRatBN7.2	7	10,153,501 - 10,169,381 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	10,153,649 - 10,169,378 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	13,025,706 - 13,041,902 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	14,903,793 - 14,919,989 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	12,765,804 - 12,781,867 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	13,039,759 - 13,055,632 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	13,039,781 - 13,055,632 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	13,203,171 - 13,219,034 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	11,671,223 - 11,687,698 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	8,319,518 - 8,334,990 (+)	NCBI		Celera
RGSC_v3.1	7	11,671,241 - 11,686,518 (+)	NCBI
Cytogenetic Map	7	q11	NCBI

MIER2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	305,573 - 344,796 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	305,573 - 344,815 (-)	Ensembl			hg38	GRCh38
GRCh37	19	305,573 - 344,796 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	256,575 - 295,791 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	19	467,724 - 506,032 (+)	NCBI		Celera
Cytogenetic Map	19	p13.3	NCBI
HuRef	19	76,550 - 115,239 (-)	NCBI		HuRef
CHM1_1	19	303,503 - 344,381 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	255,525 - 294,230 (-)	NCBI		T2T-CHM13v2.0

Mier2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	79,376,079 - 79,395,229 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	79,376,079 - 79,391,033 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	10	79,540,245 - 79,557,042 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	79,540,245 - 79,555,199 (-)	Ensembl			mm10	GRCm38
MGSCv37	10	79,002,990 - 79,017,836 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	10	78,943,374 - 78,958,220 (-)	NCBI		MGSCv36	mm8
Celera	10	80,553,552 - 80,568,412 (-)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI
cM Map	10	39.72	NCBI

Mier2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	7,279,451 - 7,302,123 (+)	Ensembl
ChiLan1.0	NW_004955495	7,279,507 - 7,300,202 (+)	NCBI	ChiLan1.0	ChiLan1.0

MIER2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	4,604,134 - 4,644,798 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	3,847,155 - 3,889,553 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	19	259,565 - 297,043 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	259,565 - 288,920 (-)	Ensembl			panPan2	panpan1.1

MIER2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	58,063,976 - 58,083,041 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	58,063,449 - 58,083,083 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	57,867,332 - 57,886,361 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	58,807,791 - 58,826,821 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	58,807,805 - 58,826,821 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	57,861,617 - 57,880,644 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	58,341,528 - 58,360,550 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	58,544,998 - 58,564,027 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mier2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	217,788,537 - 217,809,511 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936588	25,253 - 46,246 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936588	25,272 - 46,226 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MIER2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	77,912,761 - 77,938,855 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	77,912,766 - 77,938,855 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	79,251,675 - 79,277,764 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MIER2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	35,532 - 70,736 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666081	9,036,848 - 9,072,091 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mier2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624828	8,036,450 - 8,052,151 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624828	8,030,391 - 8,054,349 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mier2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	155,319,174 - 155,334,896 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mier2
121 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	557
Count of miRNA genes:	244
Interacting mature miRNAs:	316
Transcripts:	ENSRNOT00000067771
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61410	Bw19	Body weight QTL 19	6.2	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	7	1669658	46669658	Rat
1300176	Hrtrt10	Heart rate QTL 10	3.19		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	7	1	23748937	Rat
9590102	Sffal5	Serum free fatty acids level QTL 5	8.62	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	7	7216097	52216097	Rat
1578652	Bmd15	Bone mineral density QTL 15	5.2		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	7	10517086	62346019	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	10112916	99900612	Rat
2290372	Gluco33	Glucose level QTL 33	2.71		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	1	31777942	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	1	104117804	Rat
631503	Bp102	Blood pressure QTL 102	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	1709527	46709527	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	1509236	116977875	Rat
9590142	Scort5	Serum corticosterone level QTL 5	24.4	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	1	32612984	Rat
1582260	Bw72	Body weight QTL 72	3.2	0.0043	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	39960528	Rat
1582261	Bw69	Body weight QTL 69	3.2	0.0048	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	39960528	Rat
1582262	Bw75	Body weight QTL 75	3	0.0038	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	39960528	Rat
2298547	Neuinf5	Neuroinflammation QTL 5	3.7		nervous system integrity trait (VT:0010566)	spinal cord Cd74 protein level (CMO:0002131)	7	10112916	60150541	Rat
10059592	Kidm45	Kidney mass QTL 45	3.95	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	9460877	54460877	Rat
2298550	Neuinf6	Neuroinflammation QTL 6	3.3		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	7	1	29716167	Rat
1300138	Hrtrt9	Heart rate QTL 9	4.72		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	7	10498820	55498820	Rat
724560	Plsm3	Polydactyly-luxate syndrome (PLS) morphotypes QTL 3		0.0003	tibia length (VT:0004357)	tibia length (CMO:0000450)	7	1	34650782	Rat
7411566	Bw136	Body weight QTL 136	10.4	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	1	32612984	Rat

Markers in Region

D7Wox5

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	10,156,360 - 10,156,610 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	13,042,470 - 13,042,719	NCBI	Rnor6.0
Rnor_5.0	7	13,206,016 - 13,206,265	UniSTS	Rnor5.0
RGSC_v3.4	7	11,673,911 - 11,674,161	RGD	RGSC3.4
RGSC_v3.4	7	11,673,912 - 11,674,161	UniSTS	RGSC3.4
Celera	7	8,322,207 - 8,322,456	UniSTS
RGSC_v3.1	7	11,673,911 - 11,674,161	RGD
Cytogenetic Map	7	q11	UniSTS

AW610739

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	10,169,208 - 10,169,354 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	13,055,460 - 13,055,605	NCBI	Rnor6.0
Rnor_5.0	7	13,218,862 - 13,219,007	UniSTS	Rnor5.0
RGSC_v3.4	7	11,687,528 - 11,687,673	UniSTS	RGSC3.4
Celera	7	8,334,820 - 8,334,965	UniSTS
Cytogenetic Map	7	q11	UniSTS

RH133107

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	10,162,150 - 10,162,358 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	13,048,403 - 13,048,610	NCBI	Rnor6.0
Rnor_5.0	7	13,211,805 - 13,212,012	UniSTS	Rnor5.0
RGSC_v3.4	7	11,680,471 - 11,680,678	UniSTS	RGSC3.4
Celera	7	8,328,015 - 8,328,222	UniSTS
Cytogenetic Map	7	q11	UniSTS

UniSTS:236396

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	10,168,935 - 10,169,143 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	13,055,187 - 13,055,394	NCBI	Rnor6.0
Rnor_5.0	7	13,218,589 - 13,218,796	UniSTS	Rnor5.0
RGSC_v3.4	7	11,687,255 - 11,687,462	UniSTS	RGSC3.4
Celera	7	8,334,547 - 8,334,754	UniSTS
Cytogenetic Map	7	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	162	91	90	59	92	59	6	356	192	11	141	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001394321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594912	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594913	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079412	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263748	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010052993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010052994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010052995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010052996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010052997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010052998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010052999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010053000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010053001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC115214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000067771 ⟹ ENSRNOP00000060254

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	10,804,268 - 10,819,798 (+)	Ensembl
mRatBN7.2 Ensembl	7	10,153,687 - 10,169,378 (+)	Ensembl
Rnor_6.0 Ensembl	7	13,039,781 - 13,055,630 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000090048 ⟹ ENSRNOP00000068538

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	10,809,211 - 10,819,979 (+)	Ensembl
mRatBN7.2 Ensembl	7	10,153,649 - 10,169,374 (+)	Ensembl
Rnor_6.0 Ensembl	7	13,039,904 - 13,055,632 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103560 ⟹ ENSRNOP00000084610

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	10,809,211 - 10,819,798 (+)	Ensembl

RefSeq Acc Id:

NM_001394321 ⟹ NP_001381250

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,270 - 10,819,979 (+)	NCBI
mRatBN7.2	7	10,153,670 - 10,169,381 (+)	NCBI

RefSeq Acc Id:

XM_017594912 ⟹ XP_017450401

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,313 - 10,819,976 (+)	NCBI
mRatBN7.2	7	10,153,710 - 10,169,381 (+)	NCBI
Rnor_6.0	7	13,039,817 - 13,055,632 (+)	NCBI

Sequence:

show sequence

GCGGCTGGGTAGCGGCCCCTCCCACACGTGCCCTGGGTCGACCGGGTCCGACCCATGCTCTCCC
AGTCTGAGCGCCTCGAGCCTCCCCACTGTTCCCGGGCGGAGCATGAGCCCCGTGAGCGCCCGAC
GACCCCCCCTCCATCTCGTTCACGGCCTCCTCTCTGGAGAGGCAGAGTCCTCGTGTGGCCTCCT
GCCTTGTTCACAGCCTTTGTCCTCGGGAGCCCAGCTTGCAGACTACAGCAGCAGCCAAGACTGT
GGTTGCGGGACCAGATCCCTCCATGGCTTTCTACCATCACCTGACTGGCCTACCCCGTTCAGAC
CCACACCTTGCCTACTGCTGAATCCTTTCACAGTGGTGTCCATGGGCTCTGCCGACCATCAGTT
TCACCTCACTGAGCTCCTGACACAGAACTACAGCCTCCAAGAAGGCTGTGCCGAGGCCCTGCAG
GGTCCTGACAGGCCGGAGGAGGAGCTGGACAAGGACTTCATCGACCAGAGCAGTGACATGCCCC
TGGATGAGCTGCTCGCACTGTACGGGTACGAGTCGTCAGAGCCCATCTCTGAGCAGGAGAGCGA
GGGCGGTGACACGGCTCCACCCCTCCCAGACATGACCTTGGACAAGGCTTGGCCTTTTGTGTTG
GTATTGGGTGTTGGTACAGCAGTTGCCATACTTCGTTTACTGTCCTGTTCAAAGGAGCAGATAG
CCAAGGACTTGCTTTCTGGGGAAGAAGAGGAAGAAACACAGTCCTCCGCTGACGACCTCACCCC
ATCTGTCACCTCCCATGAGGCCTCGGACCTCTTTCATAACCAGAGTGGGTCCCGGTTCTTGTCT
GGTGACAACGGCCCAGGCTCCTCAGCCTCCTCCGACACCGAAGAGGACGCCCTTCCCGCCAACA
AGTGCAAGAAGGAGATCATGGTAGGGCCTCAATTCCAAGCTGACCTCAACATCCTGCACTTGAA
CCGACATTGTGACAAGATCTATGAAAATGAAGACCAGCTGCTGTGGAGCCCCACCGTGCTCCCA
GAGCGGGAGGTGGAGGAGTTCCTGTACAGGGCAGTGAAGCGGCGGTGGCAGGAGATGGCTGGCC
CCCAGATCCCAGAGGGCGAGGTGGTGAAGGACAGTGAACAGGCGCTGTACGAGCTGGTGAAGTG
TAATTTCAATGTGGAGGAGGCCCTGCGCAGGCTGAGGTTCAATGTGAAGGTGATCCGAGATGGG
CTGTGTGCCTGGAGCGAGGAGGAGTGCAGGAACTTTGAACATGGCTTCCGTGTTCACGGGAAGA
ACTTCCATCTGATTCAGGCCAACAAGGTCCGCACGCGGTCAGTGGGCGAGTGTGTGGAGTATTA
TTACCTGTGGAAGAAGTCTGAGCGCTATGACTACTTTGCCCAGCAGACGAGGCTGGGTCGGAGG
AAGTTCGTCTCCTCCGGAACCACGGATACTGAACAGGACCTGGATGGTCTTGACCCTGATGGCC
ATGCCCGGCTGCAGTCTGAGACAAGGGTGCCCGTGGAGCCTCTGAGTGCGGACATCGAAGCTGG
TGGGCTTGATCAGCCCGGAGTGGACTCGGATGACCTCCCGTCCTCAGAGCCAGGACCGAGTCCC
TTCCAGCAGCTGGATGAACCCCCTGCCGTGCCCTCGCTCCAGCAGCCCACTAGCCTGGCCACCT
CGGCTGAACTCCCACTGACTGAACTCCCACCGGCGGCTGCTGCTCCAGAGCCGGCCACCAGCCC
CAGGCTGGCTGTGGACCTTGCCCTCCCTGAGGAGCTGCCCCTTGTGTCCAGCCCTGTGGCTCTG
AATGGCGACCCTGCAGAGCCCATGGCTCCAGCACAGGTGGCCTTGTCGGTCACTGAATTTGGAC
TCATTGGCATTGGGGATGTGAATCCCTTCCTAACTGGCCACCCAGCGTGCCCAGCCTCCACACT
GCACGCAGAGCCCCTGTCACAGTGCAATGTGATGACCTGTTGACCGCTGGCCGTCTGTGGGTGT
GTGTGCTCAGCATGGGCGTGGCGGCACTGCCAGGCCTGCGAGTCAGTCTTCCTGACCCCTTCCC
GTGCAGGCCTGTGTGGGACCTTCTCTGCGTCACAAAATGATGGGATTCAGTGAAGTGGCCAGGG
CCACACAGACCCCAGACCTCAGCACCCAGCACCACACTCCGCACCATGGAGTCACGGAGCCAGC
CACTGGCCCCTCAGCCGCAGAGGCTGGGCAGGCGGTGCTGCCTGGCTTTGGGCAGGACTCTTCC
CGCACCAGCAGCCTCTGCCCAGGCACCCTCCACAGGCCAGCTCTTTGCCCACCACTGCGGGGTT
GCCCCTCCAGCCTTGGCTCAGCGTGGGACTTTGGGGCACAGAGCCATATACCTCGCCCTGTGGC
CGCCCTTCTCGGCCCTTTGCCGTCTCACTTCAGGAAAAGCCGCACTTTATACCCCAACTGCCTC
CTGCCTGCGCTCCCCACCCTGTGCCGTGGTGGGGCCTCAGCAACCCAGGCGAGTGAGGAGCAGA
TCTGCTCCCTTCCTGCCCCTCTCCTCGGGCCGCTCTGGGCACCGCTCTGGAAGCACTACCCTGC
CTCCCACCTGTCCTGCCTGCGGGTCTCGTTTCTTTGGAGGCTCCTGGCAGGTGGCTGGGTCCAT
CTTGTCCTCGGCCTCCCTCATTTTATTTATGTTGGTGTTTACAATTTGGAGTGGGGTCCCTGGG
CAGGCAGCTCCGCCCGGTGTTGGCAGAGCGGTGCTGTTTGAGCCTGTGCGGCTGGACTCGACTG
TCCCTCGCCCCACCGAGGACACTGTGATGTGAGACTGCCTTTGCCCAATGCTATTTTATTTATT
AAACTTGATTTGAAGCCTGG

hide sequence

RefSeq Acc Id:

XM_017594913 ⟹ XP_017450402

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,238 - 10,819,976 (+)	NCBI
mRatBN7.2	7	10,153,580 - 10,169,381 (+)	NCBI
Rnor_6.0	7	13,039,759 - 13,055,632 (+)	NCBI

Sequence:

show sequence

GGGACCCGCGCGGCCACCGCCTCCCGCGCGCACGCTCGGCCATGGCGGAGGCCTCCTCTCTGGA
GAGGCAGAGTCCTCGTGTGGCCTCCTGCCTTGTTCACAGCCTTTGTCCTCGGGAGCCCAGCTTG
CAGACTACAGCAGTGGTGTCCATGGGCTCTGCCGACCATCAGTTTCACCTCACTGAGCTCCTGA
CACAGAACTACAGCCTCCAAGAAGGCTGTGCCGAGGCCCTGCAGGGTCCTGACAGGCCGGAGGA
GGAGCTGGACAAGGACTTCATCGACCAGAGCAGTGACATGCCCCTGGATGAGCTGCTCGCACTG
TACGGGTACGAGTCGTCAGAGCCCATCTCTGAGCAGGAGAGCGAGGGCGGTGACACGGCTCCAC
CCCTCCCAGACATGACCTTGGACAAGGCTTGGCCTTTTGTGTTGGTATTGGGTGTTGGTACAGC
AGTTGCCATACTTCGTTTACTGTCCTGTTCAAAGGAGCAGATAGCCAAGGACTTGCTTTCTGGG
GAAGAAGAGGAAGAAACACAGTCCTCCGCTGACGACCTCACCCCATCTGTCACCTCCCATGAGG
CCTCGGACCTCTTTCATAACCAGAGTGGGTCCCGGTTCTTGTCTGGTGACAACGGCCCAGGCTC
CTCAGCCTCCTCCGACACCGAAGAGGACGCCCTTCCCGCCAACAAGTGCAAGAAGGAGATCATG
GTAGGGCCTCAATTCCAAGCTGACCTCAACATCCTGCACTTGAACCGACATTGTGACAAGATCT
ATGAAAATGAAGACCAGCTGCTGTGGAGCCCCACCGTGCTCCCAGAGCGGGAGGTGGAGGAGTT
CCTGTACAGGGCAGTGAAGCGGCGGTGGCAGGAGATGGCTGGCCCCCAGATCCCAGAGGGCGAG
GTGGTGAAGGACAGTGAACAGGCGCTGTACGAGCTGGTGAAGTGTAATTTCAATGTGGAGGAGG
CCCTGCGCAGGCTGAGGTTCAATGTGAAGGTGATCCGAGATGGGCTGTGTGCCTGGAGCGAGGA
GGAGTGCAGGAACTTTGAACATGGCTTCCGTGTTCACGGGAAGAACTTCCATCTGATTCAGGCC
AACAAGGTCCGCACGCGGTCAGTGGGCGAGTGTGTGGAGTATTATTACCTGTGGAAGAAGTCTG
AGCGCTATGACTACTTTGCCCAGCAGACGAGGCTGGGTCGGAGGAAGTTCGTCTCCTCCGGAAC
CACGGATACTGAACAGGACCTGGATGGTCTTGACCCTGATGGCCATGCCCGGCTGCAGTCTGAG
ACAAGGGTGCCCGTGGAGCCTCTGAGTGCGGACATCGAAGCTGGTGGGCTTGATCAGCCCGGAG
TGGACTCGGATGACCTCCCGTCCTCAGAGCCAGGACCGAGTCCCTTCCAGCAGCTGGATGAACC
CCCTGCCGTGCCCTCGCTCCAGCAGCCCACTAGCCTGGCCACCTCGGCTGAACTCCCACTGACT
GAACTCCCACCGGCGGCTGCTGCTCCAGAGCCGGCCACCAGCCCCAGGCTGGCTGTGGACCTTG
CCCTCCCTGAGGAGCTGCCCCTTGTGTCCAGCCCTGTGGCTCTGAATGGCGACCCTGCAGAGCC
CATGGCTCCAGCACAGGTGGCCTTGTCGGTCACTGAATTTGGACTCATTGGCATTGGGGATGTG
AATCCCTTCCTAACTGGCCACCCAGCGTGCCCAGCCTCCACACTGCACGCAGAGCCCCTGTCAC
AGTGCAATGTGATGACCTGTTGACCGCTGGCCGTCTGTGGGTGTGTGTGCTCAGCATGGGCGTG
GCGGCACTGCCAGGCCTGCGAGTCAGTCTTCCTGACCCCTTCCCGTGCAGGCCTGTGTGGGACC
TTCTCTGCGTCACAAAATGATGGGATTCAGTGAAGTGGCCAGGGCCACACAGACCCCAGACCTC
AGCACCCAGCACCACACTCCGCACCATGGAGTCACGGAGCCAGCCACTGGCCCCTCAGCCGCAG
AGGCTGGGCAGGCGGTGCTGCCTGGCTTTGGGCAGGACTCTTCCCGCACCAGCAGCCTCTGCCC
AGGCACCCTCCACAGGCCAGCTCTTTGCCCACCACTGCGGGGTTGCCCCTCCAGCCTTGGCTCA
GCGTGGGACTTTGGGGCACAGAGCCATATACCTCGCCCTGTGGCCGCCCTTCTCGGCCCTTTGC
CGTCTCACTTCAGGAAAAGCCGCACTTTATACCCCAACTGCCTCCTGCCTGCGCTCCCCACCCT
GTGCCGTGGTGGGGCCTCAGCAACCCAGGCGAGTGAGGAGCAGATCTGCTCCCTTCCTGCCCCT
CTCCTCGGGCCGCTCTGGGCACCGCTCTGGAAGCACTACCCTGCCTCCCACCTGTCCTGCCTGC
GGGTCTCGTTTCTTTGGAGGCTCCTGGCAGGTGGCTGGGTCCATCTTGTCCTCGGCCTCCCTCA
TTTTATTTATGTTGGTGTTTACAATTTGGAGTGGGGTCCCTGGGCAGGCAGCTCCGCCCGGTGT
TGGCAGAGCGGTGCTGTTTGAGCCTGTGCGGCTGGACTCGACTGTCCCTCGCCCCACCGAGGAC
ACTGTGATGTGAGACTGCCTTTGCCCAATGCTATTTTATTTATTAAACTTGATTTGAAGCCTGG

hide sequence

RefSeq Acc Id:

XM_017594914 ⟹ XP_017450403

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,491 - 10,819,976 (+)	NCBI
mRatBN7.2	7	10,153,892 - 10,169,381 (+)	NCBI
Rnor_6.0	7	13,040,012 - 13,055,632 (+)	NCBI

Sequence:

show sequence

GGCCGAGTGCGGGGCCGAGACCCGGGGCCGCGCGGCGGGAGGGCGCCGCGGACGGGGTGGGTGT
GCGGTGCTGGCGTCCCGGACGGCGGCGCGGGGACCGTATCCCAGCGCACTGGGGATGAGCAGGG
CGCGGAGTCGACGGCGCTCTGCGAGCCGAAAGTTTCGCGCGTGGAGTTCGTCTGGCTGTGGGAG
CGAGAGCGCGGGCCTCCCCGCGGGTGCGGGGCTGCGGCGCTCAGCCCAGAGCTGACCTGCACCT
CGGGGTGCGGCCGCTGAACTCCGGGACCAGTCCCTATCGACGCGCTACGAATCCGCCACTCCGG
CCTCCTCTCTGGAGAGGCAGAGTCCTCGTGTGGCCTCCTGCCTTGTTCACAGCCTTTGTCCTCG
GGAGCCCAGCTTGCAGACTACAGCAGTGGTGTCCATGGGCTCTGCCGACCATCAGTTTCACCTC
ACTGAGCTCCTGACACAGAACTACAGCCTCCAAGAAGGCTGTGCCGAGGCCCTGCAGGGTCCTG
ACAGGCCGGAGGAGGAGCTGGACAAGGACTTCATCGACCAGAGCAGTGACATGCCCCTGGATGA
GCTGCTCGCACTGTACGGGTACGAGTCGTCAGAGCCCATCTCTGAGCAGGAGAGCGAGGGCGGT
GACACGGCTCCACCCCTCCCAGACATGACCTTGGACAAGGCTTGGCCTTTTGTGTTGGTATTGG
GTGTTGGTACAGCAGTTGCCATACTTCGTTTACTGTCCTGTTCAAAGGAGCAGATAGCCAAGGA
CTTGCTTTCTGGGGAAGAAGAGGAAGAAACACAGTCCTCCGCTGACGACCTCACCCCATCTGTC
ACCTCCCATGAGGCCTCGGACCTCTTTCATAACCAGAGTGGGTCCCGGTTCTTGTCTGGTGACA
ACGGCCCAGGCTCCTCAGCCTCCTCCGACACCGAAGAGGACGCCCTTCCCGCCAACAAGTGCAA
GAAGGAGATCATGGTAGGGCCTCAATTCCAAGCTGACCTCAACATCCTGCACTTGAACCGACAT
TGTGACAAGATCTATGAAAATGAAGACCAGCTGCTGTGGAGCCCCACCGTGCTCCCAGAGCGGG
AGGTGGAGGAGTTCCTGTACAGGGCAGTGAAGCGGCGGTGGCAGGAGATGGCTGGCCCCCAGAT
CCCAGAGGGCGAGGTGGTGAAGGACAGTGAACAGGCGCTGTACGAGCTGGTGAAGTGTAATTTC
AATGTGGAGGAGGCCCTGCGCAGGCTGAGGTTCAATGTGAAGGTGATCCGAGATGGGCTGTGTG
CCTGGAGCGAGGAGGAGTGCAGGAACTTTGAACATGGCTTCCGTGTTCACGGGAAGAACTTCCA
TCTGATTCAGGCCAACAAGGTCCGCACGCGGTCAGTGGGCGAGTGTGTGGAGTATTATTACCTG
TGGAAGAAGTCTGAGCGCTATGACTACTTTGCCCAGCAGACGAGGCTGGGTCGGAGGAAGTTCG
TCTCCTCCGGAACCACGGATACTGAACAGGACCTGGATGGTCTTGACCCTGATGGCCATGCCCG
GCTGCAGTCTGAGACAAGGGTGCCCGTGGAGCCTCTGAGTGCGGACATCGAAGCTGGTGGGCTT
GATCAGCCCGGAGTGGACTCGGATGACCTCCCGTCCTCAGAGCCAGGACCGAGTCCCTTCCAGC
AGCTGGATGAACCCCCTGCCGTGCCCTCGCTCCAGCAGCCCACTAGCCTGGCCACCTCGGCTGA
ACTCCCACTGACTGAACTCCCACCGGCGGCTGCTGCTCCAGAGCCGGCCACCAGCCCCAGGCTG
GCTGTGGACCTTGCCCTCCCTGAGGAGCTGCCCCTTGTGTCCAGCCCTGTGGCTCTGAATGGCG
ACCCTGCAGAGCCCATGGCTCCAGCACAGGTGGCCTTGTCGGTCACTGAATTTGGACTCATTGG
CATTGGGGATGTGAATCCCTTCCTAACTGGCCACCCAGCGTGCCCAGCCTCCACACTGCACGCA
GAGCCCCTGTCACAGTGCAATGTGATGACCTGTTGACCGCTGGCCGTCTGTGGGTGTGTGTGCT
CAGCATGGGCGTGGCGGCACTGCCAGGCCTGCGAGTCAGTCTTCCTGACCCCTTCCCGTGCAGG
CCTGTGTGGGACCTTCTCTGCGTCACAAAATGATGGGATTCAGTGAAGTGGCCAGGGCCACACA
GACCCCAGACCTCAGCACCCAGCACCACACTCCGCACCATGGAGTCACGGAGCCAGCCACTGGC
CCCTCAGCCGCAGAGGCTGGGCAGGCGGTGCTGCCTGGCTTTGGGCAGGACTCTTCCCGCACCA
GCAGCCTCTGCCCAGGCACCCTCCACAGGCCAGCTCTTTGCCCACCACTGCGGGGTTGCCCCTC
CAGCCTTGGCTCAGCGTGGGACTTTGGGGCACAGAGCCATATACCTCGCCCTGTGGCCGCCCTT
CTCGGCCCTTTGCCGTCTCACTTCAGGAAAAGCCGCACTTTATACCCCAACTGCCTCCTGCCTG
CGCTCCCCACCCTGTGCCGTGGTGGGGCCTCAGCAACCCAGGCGAGTGAGGAGCAGATCTGCTC
CCTTCCTGCCCCTCTCCTCGGGCCGCTCTGGGCACCGCTCTGGAAGCACTACCCTGCCTCCCAC
CTGTCCTGCCTGCGGGTCTCGTTTCTTTGGAGGCTCCTGGCAGGTGGCTGGGTCCATCTTGTCC
TCGGCCTCCCTCATTTTATTTATGTTGGTGTTTACAATTTGGAGTGGGGTCCCTGGGCAGGCAG
CTCCGCCCGGTGTTGGCAGAGCGGTGCTGTTTGAGCCTGTGCGGCTGGACTCGACTGTCCCTCG
CCCCACCGAGGACACTGTGATGTGAGACTGCCTTTGCCCAATGCTATTTTATTTATTAAACTTG
ATTTGAAGCCTGG

hide sequence

RefSeq Acc Id:

XM_017594915 ⟹ XP_017450404

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,491 - 10,819,976 (+)	NCBI
mRatBN7.2	7	10,153,894 - 10,169,381 (+)	NCBI
Rnor_6.0	7	13,040,014 - 13,055,632 (+)	NCBI

Sequence:

show sequence

CCGAGTGCGGGGCCGAGACCCGGGGCCGCGCGGCGGGAGGGCGCCGCGGACGGGGTGGGTGTGC
GGTGCTGGCGTCCCGGACGGCGGCGCGGGGACCGTATCCCAGCGCACTGGGGATGAGCAGGGCG
CGGAGTCGACGGCGCTCTGCGAGCCGAAAGTTTCGCGCGTGGAGTTCGTCTGGCTGTGGGAGCG
AGAGCGCGGGCCTCCCCGCGGGTGCGGGGCTGCGGCGCTCAGCCCAGAGCTGACCTGCACCTCG
GGGTGCGGCCGCTGAACTCCGGGACCAGTCCCTATCGACGCGCTACGAATCCGCCACTCCGGCC
TCCTCTCTGGAGAGGCAGAGTCCTCGTGTGGCCTCCTGCCTTGTTCACAGCCTTTGTCCTCGGG
AGCCCAGCTTGCAGACTACAGCAGTGGTGTCCATGGGCTCTGCCGACCATCAGTTTCACCTCAC
TGAGCTCCTGACACAGAACTACAGCCTCCAAGAAGGCTGTGCCGAGGCCCTGCAGGGTCCTGAC
AGGCCGGAGGAGGAGCTGGACAAGGACTTCATCGACCAGAGCAGTGACATGCCCCTGGATGAGC
TGCTCGCACTGTACGGGTACGAGTCGTCAGAGCCCATCTCTGAGCAGGAGAGCGAGGGCGGTGA
CACGGCTCCACCCCTCCCAGACATGACCTTGGACAAGGAGCAGATAGCCAAGGACTTGCTTTCT
GGGGAAGAAGAGGAAGAAACACAGTCCTCCGCTGACGACCTCACCCCATCTGTCACCTCCCATG
AGGCCTCGGACCTCTTTCATAACCAGAGTGGGTCCCGGTTCTTGTCTGGTGACAACGGCCCAGG
CTCCTCAGCCTCCTCCGACACCGAAGAGGACGCCCTTCCCGCCAACAAGTGCAAGAAGGAGATC
ATGGTAGGGCCTCAATTCCAAGCTGACCTCAACATCCTGCACTTGAACCGACATTGTGACAAGA
TCTATGAAAATGAAGACCAGCTGCTGTGGAGCCCCACCGTGCTCCCAGAGCGGGAGGTGGAGGA
GTTCCTGTACAGGGCAGTGAAGCGGCGGTGGCAGGAGATGGCTGGCCCCCAGATCCCAGAGGGC
GAGGTGGTGAAGGACAGTGAACAGGCGCTGTACGAGCTGGTGAAGTGTAATTTCAATGTGGAGG
AGGCCCTGCGCAGGCTGAGGTTCAATGTGAAGGTGATCCGAGATGGGCTGTGTGCCTGGAGCGA
GGAGGAGTGCAGGAACTTTGAACATGGCTTCCGTGTTCACGGGAAGAACTTCCATCTGATTCAG
GCCAACAAGGTCCGCACGCGGTCAGTGGGCGAGTGTGTGGAGTATTATTACCTGTGGAAGAAGT
CTGAGCGCTATGACTACTTTGCCCAGCAGACGAGGCTGGGTCGGAGGAAGTTCGTCTCCTCCGG
AACCACGGATACTGAACAGGACCTGGATGGTCTTGACCCTGATGGCCATGCCCGGCTGCAGTCT
GAGACAAGGGTGCCCGTGGAGCCTCTGAGTGCGGACATCGAAGCTGGTGGGCTTGATCAGCCCG
GAGTGGACTCGGATGACCTCCCGTCCTCAGAGCCAGGACCGAGTCCCTTCCAGCAGCTGGATGA
ACCCCCTGCCGTGCCCTCGCTCCAGCAGCCCACTAGCCTGGCCACCTCGGCTGAACTCCCACTG
ACTGAACTCCCACCGGCGGCTGCTGCTCCAGAGCCGGCCACCAGCCCCAGGCTGGCTGTGGACC
TTGCCCTCCCTGAGGAGCTGCCCCTTGTGTCCAGCCCTGTGGCTCTGAATGGCGACCCTGCAGA
GCCCATGGCTCCAGCACAGGTGGCCTTGTCGGTCACTGAATTTGGACTCATTGGCATTGGGGAT
GTGAATCCCTTCCTAACTGGCCACCCAGCGTGCCCAGCCTCCACACTGCACGCAGAGCCCCTGT
CACAGTGCAATGTGATGACCTGTTGACCGCTGGCCGTCTGTGGGTGTGTGTGCTCAGCATGGGC
GTGGCGGCACTGCCAGGCCTGCGAGTCAGTCTTCCTGACCCCTTCCCGTGCAGGCCTGTGTGGG
ACCTTCTCTGCGTCACAAAATGATGGGATTCAGTGAAGTGGCCAGGGCCACACAGACCCCAGAC
CTCAGCACCCAGCACCACACTCCGCACCATGGAGTCACGGAGCCAGCCACTGGCCCCTCAGCCG
CAGAGGCTGGGCAGGCGGTGCTGCCTGGCTTTGGGCAGGACTCTTCCCGCACCAGCAGCCTCTG
CCCAGGCACCCTCCACAGGCCAGCTCTTTGCCCACCACTGCGGGGTTGCCCCTCCAGCCTTGGC
TCAGCGTGGGACTTTGGGGCACAGAGCCATATACCTCGCCCTGTGGCCGCCCTTCTCGGCCCTT
TGCCGTCTCACTTCAGGAAAAGCCGCACTTTATACCCCAACTGCCTCCTGCCTGCGCTCCCCAC
CCTGTGCCGTGGTGGGGCCTCAGCAACCCAGGCGAGTGAGGAGCAGATCTGCTCCCTTCCTGCC
CCTCTCCTCGGGCCGCTCTGGGCACCGCTCTGGAAGCACTACCCTGCCTCCCACCTGTCCTGCC
TGCGGGTCTCGTTTCTTTGGAGGCTCCTGGCAGGTGGCTGGGTCCATCTTGTCCTCGGCCTCCC
TCATTTTATTTATGTTGGTGTTTACAATTTGGAGTGGGGTCCCTGGGCAGGCAGCTCCGCCCGG
TGTTGGCAGAGCGGTGCTGTTTGAGCCTGTGCGGCTGGACTCGACTGTCCCTCGCCCCACCGAG
GACACTGTGATGTGAGACTGCCTTTGCCCAATGCTATTTTATTTATTAAACTTGATTTGAAGCC
TGG

hide sequence

RefSeq Acc Id:

XM_039079407 ⟹ XP_038935335

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,819,976 (+)	NCBI
mRatBN7.2	7	10,153,501 - 10,169,381 (+)	NCBI

RefSeq Acc Id:

XM_039079408 ⟹ XP_038935336

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,819,976 (+)	NCBI
mRatBN7.2	7	10,153,501 - 10,169,381 (+)	NCBI

RefSeq Acc Id:

XM_039079409 ⟹ XP_038935337

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,491 - 10,819,976 (+)	NCBI
mRatBN7.2	7	10,153,892 - 10,169,381 (+)	NCBI

RefSeq Acc Id:

XM_039079410 ⟹ XP_038935338

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,491 - 10,819,976 (+)	NCBI
mRatBN7.2	7	10,153,892 - 10,169,381 (+)	NCBI

RefSeq Acc Id:

XM_039079411 ⟹ XP_038935339

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,491 - 10,819,976 (+)	NCBI
mRatBN7.2	7	10,153,892 - 10,169,381 (+)	NCBI

RefSeq Acc Id:

XM_039079412 ⟹ XP_038935340

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,809,576 - 10,819,976 (+)	NCBI
mRatBN7.2	7	10,158,960 - 10,169,381 (+)	NCBI

RefSeq Acc Id:

XM_063263747 ⟹ XP_063119817

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,818,497 (+)	NCBI

RefSeq Acc Id:

XM_063263748 ⟹ XP_063119818

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,491 - 10,819,976 (+)	NCBI

RefSeq Acc Id:

XM_063263749 ⟹ XP_063119819

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,441 - 10,819,976 (+)	NCBI

RefSeq Acc Id:

XR_010052993

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,817,652 (+)	NCBI

RefSeq Acc Id:

XR_010052994

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,817,652 (+)	NCBI

RefSeq Acc Id:

XR_010052995

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,817,652 (+)	NCBI

RefSeq Acc Id:

XR_010052996

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,817,652 (+)	NCBI

RefSeq Acc Id:

XR_010052997

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,817,652 (+)	NCBI

RefSeq Acc Id:

XR_010052998

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,817,652 (+)	NCBI

RefSeq Acc Id:

XR_010052999

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,817,652 (+)	NCBI

RefSeq Acc Id:

XR_010053000

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,817,652 (+)	NCBI

RefSeq Acc Id:

XR_010053001

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,804,254 - 10,817,652 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001381250	(Get FASTA)	NCBI Sequence Viewer
	XP_017450401	(Get FASTA)	NCBI Sequence Viewer
	XP_017450402	(Get FASTA)	NCBI Sequence Viewer
	XP_017450403	(Get FASTA)	NCBI Sequence Viewer
	XP_017450404	(Get FASTA)	NCBI Sequence Viewer
	XP_038935335	(Get FASTA)	NCBI Sequence Viewer
	XP_038935336	(Get FASTA)	NCBI Sequence Viewer
	XP_038935337	(Get FASTA)	NCBI Sequence Viewer
	XP_038935338	(Get FASTA)	NCBI Sequence Viewer
	XP_038935339	(Get FASTA)	NCBI Sequence Viewer
	XP_038935340	(Get FASTA)	NCBI Sequence Viewer
	XP_063119817	(Get FASTA)	NCBI Sequence Viewer
	XP_063119818	(Get FASTA)	NCBI Sequence Viewer
	XP_063119819	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL89423	(Get FASTA)	NCBI Sequence Viewer
	EDL89424	(Get FASTA)	NCBI Sequence Viewer
	EDL89425	(Get FASTA)	NCBI Sequence Viewer
	EDL89426	(Get FASTA)	NCBI Sequence Viewer
	EDL89427	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000060254.3
	ENSRNOP00000068538
	ENSRNOP00000068538.3
	ENSRNOP00000084610.2

RefSeq Acc Id:	XP_017450402 ⟸ XM_017594913
- Peptide Label:	isoform X4
- UniProtKB:	A6K903 (UniProtKB/TrEMBL), D3ZR39 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEASSLERQSPRVASCLVHSLCPREPSLQTTAVVSMGSADHQFHLTELLTQNYSLQEGCAEAL QGPDRPEEELDKDFIDQSSDMPLDELLALYGYESSEPISEQESEGGDTAPPLPDMTLDKAWPFV LVLGVGTAVAILRLLSCSKEQIAKDLLSGEEEEETQSSADDLTPSVTSHEASDLFHNQSGSRFL SGDNGPGSSASSDTEEDALPANKCKKEIMVGPQFQADLNILHLNRHCDKIYENEDQLLWSPTVL PEREVEEFLYRAVKRRWQEMAGPQIPEGEVVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRD GLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGR RKFVSSGTTDTEQDLDGLDPDGHARLQSETRVPVEPLSADIEAGGLDQPGVDSDDLPSSEPGPS PFQQLDEPPAVPSLQQPTSLATSAELPLTELPPAAAAPEPATSPRLAVDLALPEELPLVSSPVA LNGDPAEPMAPAQVALSVTEFGLIGIGDVNPFLTGHPACPASTLHAEPLSQCNVMTC hide sequence

RefSeq Acc Id:

XP_017450401 ⟸ XM_017594912

- Peptide Label:

isoform X3

- Sequence:

show sequence

MSPVSARRPPLHLVHGLLSGEAESSCGLLPCSQPLSSGAQLADYSSSQDCGCGTRSLHGFLPSP
DWPTPFRPTPCLLLNPFTVVSMGSADHQFHLTELLTQNYSLQEGCAEALQGPDRPEEELDKDFI
DQSSDMPLDELLALYGYESSEPISEQESEGGDTAPPLPDMTLDKAWPFVLVLGVGTAVAILRLL
SCSKEQIAKDLLSGEEEEETQSSADDLTPSVTSHEASDLFHNQSGSRFLSGDNGPGSSASSDTE
EDALPANKCKKEIMVGPQFQADLNILHLNRHCDKIYENEDQLLWSPTVLPEREVEEFLYRAVKR
RWQEMAGPQIPEGEVVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEH
GFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKFVSSGTTDTEQDL
DGLDPDGHARLQSETRVPVEPLSADIEAGGLDQPGVDSDDLPSSEPGPSPFQQLDEPPAVPSLQ
QPTSLATSAELPLTELPPAAAAPEPATSPRLAVDLALPEELPLVSSPVALNGDPAEPMAPAQVA
LSVTEFGLIGIGDVNPFLTGHPACPASTLHAEPLSQCNVMTC

hide sequence

RefSeq Acc Id:	XP_017450403 ⟸ XM_017594914
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JT20 (UniProtKB/TrEMBL), D3ZR39 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSADHQFHLTELLTQNYSLQEGCAEALQGPDRPEEELDKDFIDQSSDMPLDELLALYGYESSE PISEQESEGGDTAPPLPDMTLDKAWPFVLVLGVGTAVAILRLLSCSKEQIAKDLLSGEEEEETQ SSADDLTPSVTSHEASDLFHNQSGSRFLSGDNGPGSSASSDTEEDALPANKCKKEIMVGPQFQA DLNILHLNRHCDKIYENEDQLLWSPTVLPEREVEEFLYRAVKRRWQEMAGPQIPEGEVVKDSEQ ALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRS VGECVEYYYLWKKSERYDYFAQQTRLGRRKFVSSGTTDTEQDLDGLDPDGHARLQSETRVPVEP LSADIEAGGLDQPGVDSDDLPSSEPGPSPFQQLDEPPAVPSLQQPTSLATSAELPLTELPPAAA APEPATSPRLAVDLALPEELPLVSSPVALNGDPAEPMAPAQVALSVTEFGLIGIGDVNPFLTGH PACPASTLHAEPLSQCNVMTC hide sequence

RefSeq Acc Id:	XP_017450404 ⟸ XM_017594915
- Peptide Label:	isoform X2
- UniProtKB:	D3ZR39 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSADHQFHLTELLTQNYSLQEGCAEALQGPDRPEEELDKDFIDQSSDMPLDELLALYGYESSE PISEQESEGGDTAPPLPDMTLDKEQIAKDLLSGEEEEETQSSADDLTPSVTSHEASDLFHNQSG SRFLSGDNGPGSSASSDTEEDALPANKCKKEIMVGPQFQADLNILHLNRHCDKIYENEDQLLWS PTVLPEREVEEFLYRAVKRRWQEMAGPQIPEGEVVKDSEQALYELVKCNFNVEEALRRLRFNVK VIRDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQT RLGRRKFVSSGTTDTEQDLDGLDPDGHARLQSETRVPVEPLSADIEAGGLDQPGVDSDDLPSSE PGPSPFQQLDEPPAVPSLQQPTSLATSAELPLTELPPAAAAPEPATSPRLAVDLALPEELPLVS SPVALNGDPAEPMAPAQVALSVTEFGLIGIGDVNPFLTGHPACPASTLHAEPLSQCNVMTC hide sequence

Ensembl Acc Id:

ENSRNOP00000060254 ⟸ ENSRNOT00000067771

Ensembl Acc Id:

ENSRNOP00000068538 ⟸ ENSRNOT00000090048

RefSeq Acc Id:	XP_038935335 ⟸ XM_039079407
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JT20 (UniProtKB/TrEMBL), D3ZR39 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038935336 ⟸ XM_039079408
- Peptide Label:	isoform X2
- UniProtKB:	D3ZR39 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038935339 ⟸ XM_039079411
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JT20 (UniProtKB/TrEMBL), D3ZR39 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038935337 ⟸ XM_039079409
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JT20 (UniProtKB/TrEMBL), D3ZR39 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038935338 ⟸ XM_039079410
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JT20 (UniProtKB/TrEMBL), D3ZR39 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038935340 ⟸ XM_039079412
- Peptide Label:	isoform X6
- UniProtKB:	A6K907 (UniProtKB/TrEMBL), D3ZR39 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001381250 ⟸ NM_001394321
- UniProtKB:	A6K904 (UniProtKB/TrEMBL), D3ZR39 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063119817 ⟸ XM_063263747
- Peptide Label:	isoform X5
- UniProtKB:	A6K906 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063119819 ⟸ XM_063263749
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JT20 (UniProtKB/TrEMBL), D3ZR39 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063119818 ⟸ XM_063263748
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JT20 (UniProtKB/TrEMBL), D3ZR39 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000084610 ⟸ ENSRNOT00000103560

Protein Domains

ELM2 SANT

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JT20-F1-model_v2	AlphaFold	A0A0G2JT20	1-509	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695060

Promoter ID:

EPDNEW_R5584

Type:

multiple initiation site

Name:

Mier2_1

Description:

MIER family member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	13,039,786 - 13,039,846	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307278	AgrOrtholog
BioCyc Gene	G2FUF-34873	BioCyc
Ensembl Genes	ENSRNOG00000000175	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000067771.4	UniProtKB/TrEMBL
	ENSRNOT00000090048	ENTREZGENE
	ENSRNOT00000090048.3	UniProtKB/TrEMBL
	ENSRNOT00000103560.2	UniProtKB/TrEMBL
Gene3D-CATH	Homeodomain-like	UniProtKB/TrEMBL
InterPro	ELM2_dom	UniProtKB/TrEMBL
	Homeodomain-like	UniProtKB/TrEMBL
	MIER/MTA	UniProtKB/TrEMBL
	SANT_DNA-bd	UniProtKB/TrEMBL
	SANT_eukarya	UniProtKB/TrEMBL
NCBI Gene	362841	ENTREZGENE
PANTHER	MESODERM INDUCTION EARLY RESPONSE PROTEIN 2	UniProtKB/TrEMBL
	PTHR10865	UniProtKB/TrEMBL
Pfam	ELM2	UniProtKB/TrEMBL
	Myb_DNA-binding	UniProtKB/TrEMBL
PhenoGen	Mier2	PhenoGen
PROSITE	ELM2	UniProtKB/TrEMBL
	SANT	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000000175	RatGTEx
SMART	ELM2	UniProtKB/TrEMBL
	SANT	UniProtKB/TrEMBL
Superfamily-SCOP	Homeodomain_like	UniProtKB/TrEMBL
UniProt	A0A0G2JT20	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GAR1_RAT	UniProtKB/TrEMBL
	A6K903	ENTREZGENE, UniProtKB/TrEMBL
	A6K904	ENTREZGENE, UniProtKB/TrEMBL
	A6K906	ENTREZGENE, UniProtKB/TrEMBL
	A6K907	ENTREZGENE, UniProtKB/TrEMBL
	D3ZR39	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-02-15	Mier2	MIER family member 2	Mier2	mesoderm induction early response 1, family member 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Mier2	mesoderm induction early response 1, family member 2	RGD1307278_predicted	similar to KIAA1193 protein (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1307278_predicted	similar to KIAA1193 protein (predicted)	LOC362841_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC362841_predicted	similar to KIAA1193 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD