Gene: Raly (RALY heterogeneous nuclear ribonucleoprotein) Rattus norvegicus
Analyze
Symbol: Raly
Name: RALY heterogeneous nuclear ribonucleoprotein
Description: ENCODES a protein that exhibits RNA binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); regulation of nucleic acid-templated transcription (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); long QT syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A
AGR Description: Predicted to have RNA binding activity and transcription coregulator activity; predicted to be involved in cholesterol homeostasis and regulation of nucleic acid-templated transcription; predicted to localize to the catalytic step 2 spliceosome; orthologous to human RALY (RALY heterogeneous nuclear ribonucleoprotein).
Merged Description: Predicted to have RNA binding activity and transcription coregulator activity; predicted to be involved in cholesterol homeostasis and regulation of nucleic acid-templated transcription; predicted to localize to the catalytic step 2 spliceosome; orthologous to human RALY (RALY heterogeneous nuclear ribonucleoprotein); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hnRNP-associated with lethal yellow; LOC296301; RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)); RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog); RNA-binding protein Raly
Orthologs:
Homo sapiens (human) : RALY (RALY heterogeneous nuclear ribonucleoprotein)  HGNC  Alliance
Mus musculus (house mouse) : Raly (hnRNP-associated with lethal yellow)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Raly (RALY heterogeneous nuclear ribonucleoprotein)
Pan paniscus (bonobo/pygmy chimpanzee) : RALY (RALY heterogeneous nuclear ribonucleoprotein)
Canis lupus familiaris (dog) : RALY (RALY heterogeneous nuclear ribonucleoprotein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Raly (RALY heterogeneous nuclear ribonucleoprotein)
Sus scrofa (pig) : RALY (RALY heterogeneous nuclear ribonucleoprotein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03150,322,834 - 150,387,345 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03156,695,466 - 156,756,864 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43145,275,832 - 145,337,808 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13145,181,453 - 145,243,415 (+)NCBI
Celera3142,036,369 - 142,100,716 (+)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Raly
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307228
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.