Rictor (RPTOR independent companion of MTOR, complex 2) - Rat Genome Database

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Gene: Rictor (RPTOR independent companion of MTOR, complex 2) Rattus norvegicus
Analyze
Symbol: Rictor
Name: RPTOR independent companion of MTOR, complex 2
RGD ID: 1307224
Description: Predicted to enable several functions, including protein kinase binding activity; protein serine/threonine kinase activator activity; and ribosome binding activity. Involved in positive regulation of endothelial cell proliferation; positive regulation of protein kinase B signaling; and regulation of phosphorylation. Predicted to be part of TORC2 complex. Human ortholog(s) of this gene implicated in breast ductal carcinoma; gastrointestinal system cancer (multiple); and lung cancer (multiple). Orthologous to human RICTOR (RPTOR independent companion of MTOR complex 2); PARTICIPATES IN mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Fyb; FYN binding protein; LOC310131; rapamycin-insensitive companion of mTOR
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: Rictorem4Mcwi  
Genetic Models: SS-Rictorem4Mcwi
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2255,811,877 - 55,903,893 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl255,811,322 - 55,901,426 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0256,013,898 - 56,105,818 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl256,052,643 - 56,101,803 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0275,754,848 - 75,846,705 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4255,982,784 - 56,071,528 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1255,911,016 - 55,999,761 (+)NCBI
Celera251,432,223 - 51,524,001 (+)NCBICelera
Cytogenetic Map2q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Elevated Rictor expression is associated with tumor progression and poor prognosis in patients with gastric cancer. Bian Y, etal., Biochem Biophys Res Commun. 2015 Aug 21;464(2):534-40. doi: 10.1016/j.bbrc.2015.07.001. Epub 2015 Jul 6.
2. RICTOR Amplification Defines a Novel Subset of Patients with Lung Cancer Who May Benefit from Treatment with mTORC1/2 Inhibitors. Cheng H, etal., Cancer Discov. 2015 Dec;5(12):1262-70. doi: 10.1158/2159-8290.CD-14-0971. Epub 2015 Sep 14.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Down-regulation of Rictor enhances cell sensitivity to PI3K inhibitor LY294002 by blocking mTORC2-medicated phosphorylation of Akt/PRAS40 in esophageal squamous cell carcinoma. Hou G, etal., Biomed Pharmacother. 2018 Oct;106:1348-1356. doi: 10.1016/j.biopha.2018.07.075. Epub 2018 Jul 23.
5. Molecular characterization of gallbladder cancer using somatic mutation profiling. Javle M, etal., Hum Pathol. 2014 Apr;45(4):701-8. doi: 10.1016/j.humpath.2013.11.001. Epub 2013 Nov 12.
6. RICTOR expression in esophageal squamous cell carcinoma and its clinical significance. Jiang WJ, etal., Med Oncol. 2017 Mar;34(3):32. doi: 10.1007/s12032-017-0894-5. Epub 2017 Jan 28.
7. Influence of Rictor and Raptor Expression of mTOR Signaling on Long-Term Outcomes of Patients with Hepatocellular Carcinoma. Kaibori M, etal., Dig Dis Sci. 2015 Apr;60(4):919-28. doi: 10.1007/s10620-014-3417-7. Epub 2014 Nov 5.
8. In situ analysis of mTORC1/2 and cellular metabolism-related proteins in human Lymphangioleiomyomatosis. Krencz I, etal., Hum Pathol. 2018 Sep;79:199-207. doi: 10.1016/j.humpath.2018.05.018. Epub 2018 Jun 6.
9. Correlation between immunohistochemistry and RICTOR fluorescence in situ hybridization amplification in small cell lung carcinoma. Krencz I, etal., Hum Pathol. 2019 Nov;93:74-80. doi: 10.1016/j.humpath.2019.08.018. Epub 2019 Aug 24.
10. mTOR signaling in growth control and disease. Laplante M and Sabatini DM, Cell. 2012 Apr 13;149(2):274-93. doi: 10.1016/j.cell.2012.03.017.
11. Hypoxia-induced endothelial proliferation requires both mTORC1 and mTORC2. Li W, etal., Circ Res. 2007 Jan 5;100(1):79-87. Epub 2006 Nov 16.
12. RICTOR/mTORC2 affects tumorigenesis and therapeutic efficacy of mTOR inhibitors in esophageal squamous cell carcinoma. Lu Z, etal., Acta Pharm Sin B. 2020 Jun;10(6):1004-1019. doi: 10.1016/j.apsb.2020.01.010. Epub 2020 Jan 26.
13. Molecular mechanisms of mTOR-mediated translational control. Ma XM and Blenis J, Nat Rev Mol Cell Biol. 2009 May;10(5):307-18. Epub 2009 Apr 2.
14. Role of insulin, adipocyte hormones, and nutrient-sensing pathways in regulating fuel metabolism and energy homeostasis: a nutritional perspective of diabetes, obesity, and cancer. Marshall S Sci STKE. 2006 Aug 1;2006(346):re7.
15. MiR-424/503-mediated Rictor upregulation promotes tumor progression. Oneyama C, etal., PLoS One. 2013 Nov 11;8(11):e80300. doi: 10.1371/journal.pone.0080300. eCollection 2013.
16. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
17. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
18. GOA pipeline RGD automated data pipeline
19. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
20. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
21. Comprehensive gene review and curation RGD comprehensive gene curation
22. Targeting mTORC2 inhibits colon cancer cell proliferation in vitro and tumor formation in vivo. Roulin D, etal., Mol Cancer. 2010 Mar 12;9:57. doi: 10.1186/1476-4598-9-57.
23. RICTOR amplification identifies a subgroup in small cell lung cancer and predicts response to drugs targeting mTOR. Sakre N, etal., Oncotarget. 2017 Jan 24;8(4):5992-6002. doi: 10.18632/oncotarget.13362.
24. Inhibition of mTORC2/RICTOR Impairs Melanoma Hepatic Metastasis. Schmidt KM, etal., Neoplasia. 2018 Dec;20(12):1198-1208. doi: 10.1016/j.neo.2018.10.001. Epub 2018 Nov 4.
25. mTOR activity and its prognostic significance in human colorectal carcinoma depending on C1 and C2 complex-related protein expression. Sticz T, etal., J Clin Pathol. 2017 May;70(5):410-416. doi: 10.1136/jclinpath-2016-203913. Epub 2016 Oct 11.
26. Overexpression of Rictor protein and Rictor-H. pylori interaction has impact on tumor progression and prognosis in patients with gastric cancer. Wang F, etal., Folia Histochem Cytobiol. 2020;58(2):96-107. doi: 10.5603/FHC.a2020.0015. Epub 2020 Jun 26.
27. [Expression of Rictor and mTOR in colorectal cancer and their clinical significance]. Wang LF, etal., Nan Fang Yi Ke Da Xue Xue Bao. 2016 Mar;36(3):396-400.
28. Targeting RICTOR Sensitizes SMAD4-Negative Colon Cancer to Irinotecan. Wong CK, etal., Mol Cancer Res. 2020 Mar;18(3):414-423. doi: 10.1158/1541-7786.MCR-19-0525. Epub 2020 Jan 13.
29. Loss of Pten synergizes with c-Met to promote hepatocellular carcinoma development via mTORC2 pathway. Xu Z, etal., Exp Mol Med. 2018 Jan 5;50(1):e417. doi: 10.1038/emm.2017.158.
30. mTORC1 and mTORC2 differentially promote natural killer cell development. Yang C, etal., Elife. 2018 May 29;7. pii: 35619. doi: 10.7554/eLife.35619.
31. mTOR complex component Rictor interacts with PKCzeta and regulates cancer cell metastasis. Zhang F, etal., Cancer Res. 2010 Nov 15;70(22):9360-70. doi: 10.1158/0008-5472.CAN-10-0207. Epub 2010 Oct 26.
32. The miR-491-3p/mTORC2/FOXO1 regulatory loop modulates chemo-sensitivity in human tongue cancer. Zheng G, etal., Oncotarget. 2015 Mar 30;6(9):6931-43. doi: 10.18632/oncotarget.3165.
Additional References at PubMed
PMID:15268862   PMID:15467718   PMID:15718470   PMID:16962653   PMID:16962829   PMID:21045808   PMID:21177249   PMID:23092880   PMID:23288930   PMID:24036451   PMID:24270265   PMID:24740015  
PMID:25897075   PMID:25970154   PMID:28035937   PMID:30637733   PMID:32232913  


Genomics

Comparative Map Data
Rictor
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2255,811,877 - 55,903,893 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl255,811,322 - 55,901,426 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0256,013,898 - 56,105,818 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl256,052,643 - 56,101,803 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0275,754,848 - 75,846,705 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4255,982,784 - 56,071,528 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1255,911,016 - 55,999,761 (+)NCBI
Celera251,432,223 - 51,524,001 (+)NCBICelera
Cytogenetic Map2q16NCBI
RICTOR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38538,937,920 - 39,074,399 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl538,937,920 - 39,074,399 (-)EnsemblGRCh38hg38GRCh38
GRCh37538,938,022 - 39,074,501 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36538,973,779 - 39,110,260 (-)NCBINCBI36Build 36hg18NCBI36
Celera538,824,519 - 38,961,093 (-)NCBICelera
Cytogenetic Map5p13.1NCBI
HuRef538,889,559 - 39,026,140 (-)NCBIHuRef
CHM1_1538,939,974 - 39,076,492 (-)NCBICHM1_1
T2T-CHM13v2.0539,187,325 - 39,323,906 (-)NCBIT2T-CHM13v2.0
Rictor
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39156,737,827 - 6,829,882 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl156,737,860 - 6,829,882 (+)EnsemblGRCm39 Ensembl
GRCm38156,708,349 - 6,800,401 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl156,708,379 - 6,800,401 (+)EnsemblGRCm38mm10GRCm38
MGSCv37156,658,381 - 6,750,401 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36156,655,598 - 6,747,602 (+)NCBIMGSCv36mm8
Celera156,556,757 - 6,648,820 (+)NCBICelera
Cytogenetic Map15A1NCBI
Rictor
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542623,468,112 - 23,582,587 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542623,468,112 - 23,582,587 (-)NCBIChiLan1.0ChiLan1.0
RICTOR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1576,390,408 - 76,474,207 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl576,389,130 - 76,469,830 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0571,299,215 - 71,435,290 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
RICTOR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1469,903,393 - 70,013,168 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl469,936,379 - 70,010,566 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha469,572,398 - 69,689,560 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0470,411,989 - 70,529,395 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl470,412,019 - 70,529,395 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1470,160,959 - 70,278,302 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0470,273,578 - 70,390,878 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0470,812,437 - 70,929,811 (+)NCBIUU_Cfam_GSD_1.0
Rictor
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213228,057,440 - 228,173,553 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365183,198,337 - 3,310,000 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049365183,198,312 - 3,314,393 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RICTOR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1624,109,939 - 24,311,132 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11624,109,934 - 24,250,019 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21625,357,044 - 25,498,055 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RICTOR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1437,758,531 - 37,885,323 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl437,762,901 - 37,873,766 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607128,126,791 - 28,254,601 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rictor
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475915,837,064 - 15,968,894 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475915,837,027 - 15,973,248 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rictor
148 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:151
Count of miRNA genes:113
Interacting mature miRNAs:125
Transcripts:ENSRNOT00000029565, ENSRNOT00000075595
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21649174061491740Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21907682564076825Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22066244865662448Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22490385374786777Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22691781781754745Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22691781781754745Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226917817127469484Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226917817136917119Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22715716072157160Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23064806575648065Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23502311780023117Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23513484188029593Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240067944102785628Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240067944102785628Rat
12879863Bp402Blood pressure QTL 4020.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24112578956532139Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)24280460760653831Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607157142209Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243154682202446871Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)243162366111362592Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)24317101783575226Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
1354592Rf50Renal function QTL 503.5urine output (VT:0003620)timed urine volume (CMO:0000260)25382274774786777Rat

Markers in Region
D2Got394  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2255,809,708 - 55,809,987 (+)MAPPERmRatBN7.2
Rnor_6.0256,011,622 - 56,011,900NCBIRnor6.0
Rnor_5.0275,752,947 - 75,753,225UniSTSRnor5.0
RGSC_v3.4255,980,922 - 55,981,200UniSTSRGSC3.4
Celera251,430,024 - 51,430,302UniSTS
Cytogenetic Map2q16UniSTS
D2Got385  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2255,809,712 - 55,809,986 (+)MAPPERmRatBN7.2
Rnor_6.0256,011,626 - 56,011,899NCBIRnor6.0
Rnor_5.0275,752,951 - 75,753,224UniSTSRnor5.0
RGSC_v3.4255,980,926 - 55,981,199UniSTSRGSC3.4
Celera251,430,028 - 51,430,301UniSTS
Cytogenetic Map2q16UniSTS
D2Got376  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2255,809,712 - 55,809,907 (+)MAPPERmRatBN7.2
Rnor_6.0256,011,626 - 56,011,820NCBIRnor6.0
Rnor_5.0275,752,951 - 75,753,145UniSTSRnor5.0
RGSC_v3.4255,980,926 - 55,981,120UniSTSRGSC3.4
Celera251,430,028 - 51,430,222UniSTS
Cytogenetic Map2q16UniSTS


Genetic Models
This gene Rictor is modified in the following models/strains

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 12 28 12 17 12 8 8 74 28 33 8 8
Low 3 31 29 29 2 29 2 7 8 3
Below cutoff 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000029565   ⟹   ENSRNOP00000030782
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl255,811,322 - 55,901,426 (+)Ensembl
Rnor_6.0 Ensembl256,052,643 - 56,101,803 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000109110   ⟹   ENSRNOP00000079615
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl255,811,928 - 55,901,426 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000112769   ⟹   ENSRNOP00000079071
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl255,857,970 - 55,901,426 (+)Ensembl
RefSeq Acc Id: XM_008760807   ⟹   XP_008759029
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2255,811,877 - 55,903,893 (+)NCBI
Rnor_6.0256,013,898 - 56,105,818 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039103527   ⟹   XP_038959455
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2255,811,877 - 55,903,893 (+)NCBI
RefSeq Acc Id: XM_039103528   ⟹   XP_038959456
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2255,811,877 - 55,891,854 (+)NCBI
Protein Sequences
Protein RefSeqs XP_008759029 (Get FASTA)   NCBI Sequence Viewer  
  XP_038959455 (Get FASTA)   NCBI Sequence Viewer  
  XP_038959456 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008759029   ⟸   XM_008760807
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSRNOP00000030782   ⟸   ENSRNOT00000029565
RefSeq Acc Id: XP_038959455   ⟸   XM_039103527
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZNG4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038959456   ⟸   XM_039103528
- Peptide Label: isoform X3
RefSeq Acc Id: ENSRNOP00000079615   ⟸   ENSRNOT00000109110
RefSeq Acc Id: ENSRNOP00000079071   ⟸   ENSRNOT00000112769
Protein Domains
RICTOR_M   RICTOR_N   RICTOR_V

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1M4J0-F1-model_v2 AlphaFold F1M4J0 1-1697 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307224 AgrOrtholog
BioCyc Gene G2FUF-54150 BioCyc
Ensembl Genes ENSRNOG00000011341 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000030782 ENTREZGENE
  ENSRNOP00000030782.6 UniProtKB/TrEMBL
  ENSRNOP00000079071.1 UniProtKB/TrEMBL
  ENSRNOP00000079615 ENTREZGENE
  ENSRNOP00000079615.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000029565 ENTREZGENE
  ENSRNOT00000029565.7 UniProtKB/TrEMBL
  ENSRNOT00000109110 ENTREZGENE
  ENSRNOT00000109110.1 UniProtKB/TrEMBL
  ENSRNOT00000112769.1 UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/TrEMBL
  Pianissimo_fam UniProtKB/TrEMBL
  Pianissimo_N UniProtKB/TrEMBL
  Rictor_IV UniProtKB/TrEMBL
  RICTOR_M UniProtKB/TrEMBL
  RICTOR_phospho UniProtKB/TrEMBL
  RICTOR_V UniProtKB/TrEMBL
NCBI Gene 310131 ENTREZGENE
PANTHER PTHR13298 UniProtKB/TrEMBL
Pfam RasGEF_N_2 UniProtKB/TrEMBL
  RICTOR_M UniProtKB/TrEMBL
  RICTOR_N UniProtKB/TrEMBL
  RICTOR_phospho UniProtKB/TrEMBL
  RICTOR_V UniProtKB/TrEMBL
PhenoGen Rictor PhenoGen
SMART RICTOR_M UniProtKB/TrEMBL
  RICTOR_N UniProtKB/TrEMBL
  RICTOR_phospho UniProtKB/TrEMBL
  RICTOR_V UniProtKB/TrEMBL
Superfamily-SCOP ARM-type_fold UniProtKB/TrEMBL
UniProt A0A8I5ZNG4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZQ26_RAT UniProtKB/TrEMBL
  F1M4J0_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2009-07-20 Rictor  RPTOR independent companion of MTOR, complex 2  Rictor  rapamycin-insensitive companion of mTOR  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-04 Rictor  rapamycin-insensitive companion of mTOR  Fyb_predicted  FYN binding protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-12 Fyb_predicted  FYN binding protein (predicted)      Symbol and Name status set to approved 70820 APPROVED