Gene: Pum1 (pumilio RNA-binding family member 1) Rattus norvegicus
Analyze
Symbol: Pum1
Name: pumilio RNA-binding family member 1
Description: ENCODES a protein that exhibits miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); mRNA destabilization (ortholog); positive regulation of gene silencing by miRNA (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362609; pumilio 1; pumilio 1 (Drosophila) ; pumilio homolog 1; pumilio homolog 1 (Drosophila)
Orthologs:
Homo sapiens (human) : PUM1 (pumilio RNA binding family member 1)  HGNC  Alliance
Mus musculus (house mouse) : Pum1 (pumilio RNA-binding family member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pum1 (pumilio RNA binding family member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PUM1 (pumilio RNA binding family member 1)
Canis lupus familiaris (dog) : PUM1 (pumilio RNA binding family member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pum1 (pumilio RNA binding family member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05148,781,239 - 148,911,776 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05152,491,253 - 152,616,821 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45149,530,471 - 149,651,267 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15149,541,510 - 149,661,523 (-)NCBI
Celera5141,299,396 - 141,416,333 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pum1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307190
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2018-08-08
Status: ACTIVE