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Gene: Jmjd4 (jumonji domain containing 4) Rattus norvegicus
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Symbol: Jmjd4
Name: jumonji domain containing 4
Description: Predicted to have 2-oxoglutarate-dependent dioxygenase activity. Predicted to be involved in positive regulation of translational termination and protein hydroxylation. Predicted to localize to the cytoplasm. Orthologous to human JMJD4 (jumonji domain containing 4); INTERACTS WITH bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); all-trans-retinoic acid (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: jmjC domain-containing protein 4; LOC287359; RGD1307186; similar to hypothetical protein FLJ12517
Orthologs:
Homo sapiens (human) : JMJD4 (jumonji domain containing 4)  HGNC  Alliance
Mus musculus (house mouse) : Jmjd4 (jumonji domain containing 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Jmjd4 (jumonji domain containing 4)
Pan paniscus (bonobo/pygmy chimpanzee) : JMJD4 (jumonji domain containing 4)
Canis lupus familiaris (dog) : JMJD4 (jumonji domain containing 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Jmjd4 (jumonji domain containing 4)
Sus scrofa (pig) : JMJD4 (jumonji domain containing 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01045,798,964 - 45,804,188 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01045,554,479 - 45,560,219 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41045,754,692 - 45,759,916 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11045,768,421 - 45,773,539 (+)NCBI
Celera1043,496,405 - 43,501,629 (+)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Jmjd4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307186
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.