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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | restless legs syndrome | | ISO | RGD:1315893 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:17637780 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | restless legs syndrome | | ISO | RGD:1315893 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:17637780 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
3. | GOA pipeline | RGD automated data pipeline |
4. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
5. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
6. | Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. | Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11. |
Btbd9 (Rattus norvegicus - Norway rat) |
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BTBD9 (Homo sapiens - human) |
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Btbd9 (Mus musculus - house mouse) |
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Btbd9 (Chinchilla lanigera - long-tailed chinchilla) |
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BTBD9 (Pan paniscus - bonobo/pygmy chimpanzee) |
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BTBD9 (Canis lupus familiaris - dog) |
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Btbd9 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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BTBD9 (Sus scrofa - pig) |
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BTBD9 (Chlorocebus sabaeus - green monkey) |
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Btbd9 (Heterocephalus glaber - naked mole-rat) |
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Variants in Btbd9
1663 total Variants ![]() |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
BI293561 |
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BE117401 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 2 | 10 | 18 | 4 | 17 | 4 | 2 | 74 | 34 | 40 | 11 | ||
Low | 1 | 33 | 39 | 37 | 2 | 37 | 8 | 9 | 1 | 1 | 8 | ||
Below cutoff |
RefSeq Transcripts | NM_001013073 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006256185 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039098533 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039098534 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039098535 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039098536 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039098537 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039098538 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039098539 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039098540 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC133827 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BC087068 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH473988 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JACYVU010000324 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000000649 ⟹ ENSRNOP00000000649 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001013073 ⟹ NP_001013091 | ||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006256185 ⟹ XP_006256247 | ||||||||||||||||
RefSeq Status: | |||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039098533 ⟹ XP_038954461 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039098534 ⟹ XP_038954462 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039098535 ⟹ XP_038954463 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039098536 ⟹ XP_038954464 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039098537 ⟹ XP_038954465 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039098538 ⟹ XP_038954466 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039098539 ⟹ XP_038954467 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039098540 ⟹ XP_038954468 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001013091 | (Get FASTA) | NCBI Sequence Viewer |
XP_006256247 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038954461 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038954462 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038954463 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038954464 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038954465 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038954466 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038954467 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038954468 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH87068 | (Get FASTA) | NCBI Sequence Viewer |
EDL96983 | (Get FASTA) | NCBI Sequence Viewer | |
Q5PQR3 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001013091 ⟸ NM_001013073 |
- UniProtKB: | Q5PQR3 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006256247 ⟸ XM_006256185 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q5PQR3 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000000649 ⟸ ENSRNOT00000000649 |
RefSeq Acc Id: | XP_038954468 ⟸ XM_039098540 |
- Peptide Label: | isoform X7 |
RefSeq Acc Id: | XP_038954467 ⟸ XM_039098539 |
- Peptide Label: | isoform X7 |
RefSeq Acc Id: | XP_038954466 ⟸ XM_039098538 |
- Peptide Label: | isoform X7 |
RefSeq Acc Id: | XP_038954463 ⟸ XM_039098535 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_038954465 ⟸ XM_039098537 |
- Peptide Label: | isoform X6 |
RefSeq Acc Id: | XP_038954462 ⟸ XM_039098534 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038954461 ⟸ XM_039098533 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038954464 ⟸ XM_039098536 |
- Peptide Label: | isoform X5 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q5PQR3-F1-model_v2 | AlphaFold | Q5PQR3 | 1-612 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
Database | Acc Id | Source(s) |
AGR Gene | RGD:1306975 | AgrOrtholog |
BioCyc Gene | G2FUF-4350 | BioCyc |
Ensembl Genes | ENSRNOG00000000540 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Protein | ENSRNOP00000000649 | ENTREZGENE |
ENSRNOP00000000649.6 | UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSRNOT00000000649 | ENTREZGENE |
ENSRNOT00000000649.7 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | 1.25.40.420 | UniProtKB/Swiss-Prot |
Galactose-binding domain-like | UniProtKB/Swiss-Prot | |
IMAGE_CLONE | IMAGE:7133235 | IMAGE-MGC_LOAD |
InterPro | BACK | UniProtKB/Swiss-Prot |
BTB/POZ_dom | UniProtKB/Swiss-Prot | |
BTBD9_BACK-like_dom | UniProtKB/Swiss-Prot | |
FA58C | UniProtKB/Swiss-Prot | |
Galactose-bd-like_sf | UniProtKB/Swiss-Prot | |
SKP1/BTB/POZ_sf | UniProtKB/Swiss-Prot | |
KEGG Report | rno:294318 | UniProtKB/Swiss-Prot |
MGC_CLONE | MGC:94353 | IMAGE-MGC_LOAD |
NCBI Gene | 294318 | ENTREZGENE |
PANTHER | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 | UniProtKB/Swiss-Prot |
BTB/POZ DOMAIN-CONTAINING PROTEIN 9 | UniProtKB/Swiss-Prot | |
Pfam | BACK | UniProtKB/Swiss-Prot |
BTB | UniProtKB/Swiss-Prot | |
F5_F8_type_C | UniProtKB/Swiss-Prot | |
PhenoGen | Btbd9 | PhenoGen |
PROSITE | BTB | UniProtKB/Swiss-Prot |
SMART | BACK | UniProtKB/Swiss-Prot |
BTB | UniProtKB/Swiss-Prot | |
Superfamily-SCOP | SSF49785 | UniProtKB/Swiss-Prot |
SSF54695 | UniProtKB/Swiss-Prot | |
UniProt | BTBD9_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2016-02-17 | Btbd9 | BTB domain containing 9 | Btbd9 | BTB (POZ) domain containing 9 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2015-08-13 | Btbd9 | BTB (POZ) domain containing 9 | LOC100361081 | BTB (POZ) domain containing 9 | Data Merged | 737654 | PROVISIONAL |
2013-05-24 | Btbd9 | BTB (POZ) domain containing 9 | LOC100362201 | BTB (POZ) domain containing 9 | Data Merged | 1643240 | APPROVED |
2010-05-05 | LOC100361081 | BTB (POZ) domain containing 9 | Symbol and Name status set to provisional | 70820 | PROVISIONAL | ||
2010-05-05 | LOC100362201 | BTB (POZ) domain containing 9 | Symbol and Name status set to provisional | 70820 | PROVISIONAL | ||
2005-12-06 | Btbd9 | BTB (POZ) domain containing 9 | Btbd9_predicted | BTB (POZ) domain containing 9 (predicted) | Symbol and Name updated | 1559027 | APPROVED |
2005-01-12 | Btbd9_predicted | BTB (POZ) domain containing 9 (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |