Gene: Trim55 (tripartite motif-containing 55) Rattus norvegicus
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Symbol: Trim55
Name: tripartite motif-containing 55
Description: ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred); INTERACTS WITH bisphenol A; endosulfan; (+)-catechin (ortholog)
AGR Description: Predicted to have identical protein binding activity; predicted to localize to the cytoplasm and nucleus; orthologous to human TRIM55 (tripartite motif containing 55).
Merged Description: Predicted to have identical protein binding activity; predicted to localize to the cytoplasm and nucleus; orthologous to human TRIM55 (tripartite motif containing 55); INTERACTS WITH bisphenol A; endosulfan; (+)-catechin (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC365751; MURF-2; muRF2; muscle-specific RING finger protein 2; ring finger protein 29; Rnf29; tripartite motif-containing protein 55
Orthologs:
Homo sapiens (human) : TRIM55 (tripartite motif containing 55)  HGNC  Alliance
Mus musculus (house mouse) : Trim55 (tripartite motif-containing 55)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim55 (tripartite motif containing 55)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM55 (tripartite motif containing 55)
Canis lupus familiaris (dog) : TRIM55 (tripartite motif containing 55)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim55 (tripartite motif containing 55)
Sus scrofa (pig) : TRIM55 (tripartite motif containing 55)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02104,416,972 - 104,459,117 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02124,140,032 - 124,182,037 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42104,721,413 - 104,763,136 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12104,666,374 - 104,708,096 (+)NCBI
Celera297,493,957 - 97,535,909 (+)NCBICelera
Cytogenetic Map2q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim55
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306943
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.