Dock5 (dedicator of cytokinesis 5) - Rat Genome Database

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Gene: Dock5 (dedicator of cytokinesis 5) Rattus norvegicus
Analyze
Symbol: Dock5
Name: dedicator of cytokinesis 5
RGD ID: 1306872
Description: Predicted to enable guanyl-nucleotide exchange factor activity and small GTPase binding activity. Predicted to be involved in several processes, including Rac protein signal transduction; positive regulation of cell migration; and positive regulation of substrate adhesion-dependent cell spreading. Predicted to act upstream of or within bone remodeling and podosome assembly. Predicted to be located in cytosol and podosome. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human DOCK5 (dedicator of cytokinesis 5); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: dedicator of cytokinesis protein 5; LOC305987
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81546,155,124 - 46,334,127 (-)NCBIGRCr8
mRatBN7.21541,979,728 - 42,158,733 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1541,979,729 - 42,158,649 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1543,844,391 - 44,023,294 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01544,994,614 - 45,173,520 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01543,439,945 - 43,618,862 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01544,449,108 - 44,627,774 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1544,453,308 - 44,627,765 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01546,969,497 - 47,148,088 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41547,313,859 - 47,491,774 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11547,330,683 - 47,462,329 (-)NCBI
Celera1541,643,960 - 41,822,851 (-)NCBICelera
Cytogenetic Map15p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4,6-tribromophenol  (ISO)
2,4-dinitrotoluene  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
acrylamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
CGP 52608  (ISO)
chloroprene  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
decabromodiphenyl ether  (ISO)
Dibutyl phosphate  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
epoxiconazole  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
gentamycin  (EXP)
glyphosate  (ISO)
methapyrilene  (ISO)
methoxychlor  (EXP)
mono(2-ethylhexyl) phthalate  (ISO)
niclosamide  (ISO)
oxaliplatin  (EXP)
ozone  (EXP,ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
propanal  (ISO)
quercetin  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
triphenyl phosphate  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA,ISO)
cytosol  (IEA,ISO)
plasma membrane  (IBA,IEA,ISO)
podosome  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18396277   PMID:19004829   PMID:22158624  


Genomics

Comparative Map Data
Dock5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81546,155,124 - 46,334,127 (-)NCBIGRCr8
mRatBN7.21541,979,728 - 42,158,733 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1541,979,729 - 42,158,649 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1543,844,391 - 44,023,294 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01544,994,614 - 45,173,520 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01543,439,945 - 43,618,862 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01544,449,108 - 44,627,774 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1544,453,308 - 44,627,765 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01546,969,497 - 47,148,088 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41547,313,859 - 47,491,774 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11547,330,683 - 47,462,329 (-)NCBI
Celera1541,643,960 - 41,822,851 (-)NCBICelera
Cytogenetic Map15p12NCBI
DOCK5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38825,184,689 - 25,415,711 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl825,184,689 - 25,418,082 (+)EnsemblGRCh38hg38GRCh38
GRCh37825,042,204 - 25,273,227 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36825,098,204 - 25,326,536 (+)NCBINCBI36Build 36hg18NCBI36
Build 34825,098,203 - 25,326,535NCBI
Celera824,006,779 - 24,231,488 (+)NCBICelera
Cytogenetic Map8p21.2NCBI
HuRef823,646,114 - 23,815,584 (+)NCBIHuRef
CHM1_1825,243,660 - 25,472,059 (+)NCBICHM1_1
T2T-CHM13v2.0825,463,647 - 25,690,937 (+)NCBIT2T-CHM13v2.0
Dock5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391467,989,377 - 68,171,021 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1467,989,584 - 68,170,891 (-)EnsemblGRCm39 Ensembl
GRCm381467,751,928 - 67,933,572 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1467,752,135 - 67,933,442 (-)EnsemblGRCm38mm10GRCm38
MGSCv371468,369,985 - 68,551,629 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361466,705,258 - 66,886,902 (-)NCBIMGSCv36mm8
Celera1465,509,536 - 65,693,300 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1434.66NCBI
Dock5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540348,146,084 - 48,338,218 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540348,146,616 - 48,338,218 (+)NCBIChiLan1.0ChiLan1.0
DOCK5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2743,723,728 - 43,956,881 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1819,438,094 - 19,671,268 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0824,463,582 - 24,696,736 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1821,372,756 - 21,605,877 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl821,372,756 - 21,605,877 (+)Ensemblpanpan1.1panPan2
DOCK5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12532,046,165 - 32,257,011 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2532,046,527 - 32,283,658 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2532,630,797 - 32,841,994 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02532,245,463 - 32,457,029 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2532,248,523 - 32,457,282 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12532,201,136 - 32,412,574 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02532,050,626 - 32,261,933 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02532,216,436 - 32,428,154 (-)NCBIUU_Cfam_GSD_1.0
Dock5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494310,038,136 - 10,219,086 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367571,289,954 - 1,576,984 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367571,289,941 - 1,419,257 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DOCK5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl149,197,293 - 9,436,249 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1149,197,280 - 9,438,715 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21410,412,335 - 10,593,481 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DOCK5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1823,310,524 - 23,540,174 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl823,310,673 - 23,540,478 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605218,627,353 - 18,861,082 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dock5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475820,255,062 - 20,440,370 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475820,255,036 - 20,444,194 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dock5
656 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:113
Count of miRNA genes:96
Interacting mature miRNAs:102
Transcripts:ENSRNOT00000030384, ENSRNOT00000058887
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
2293686Bmd36Bone mineral density QTL 367.40.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)153361105871477291Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
2293691Bmd37Bone mineral density QTL 376.60.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)153361105871477291Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)154063126898288169Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)152788577486257085Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)151985656646187442Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)153405413979054139Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
2306968Anxrr23Anxiety related response QTL 234.83reflex trait (VT:0001961)amplitude of the acoustic startle response (CMO:0001520)154063126846187442Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
7411725Strs7Sensitivity to stroke QTL 73.8cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)154028990149308583Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000058887   ⟹   ENSRNOP00000055674
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1541,979,870 - 42,158,649 (-)Ensembl
Rnor_6.0 Ensembl1544,453,308 - 44,627,765 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110516   ⟹   ENSRNOP00000094403
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1541,979,729 - 42,107,652 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112046   ⟹   ENSRNOP00000077193
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1541,979,729 - 42,158,649 (-)Ensembl
RefSeq Acc Id: NM_001372012   ⟹   NP_001358941
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81546,155,124 - 46,334,042 (-)NCBI
mRatBN7.21541,979,728 - 42,158,649 (-)NCBI
RefSeq Acc Id: XM_039093338   ⟹   XP_038949266
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81546,155,130 - 46,334,124 (-)NCBI
mRatBN7.21541,979,728 - 42,158,732 (-)NCBI
RefSeq Acc Id: XM_039093339   ⟹   XP_038949267
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81546,170,884 - 46,334,127 (-)NCBI
mRatBN7.21541,995,494 - 42,158,733 (-)NCBI
RefSeq Acc Id: XM_063274295   ⟹   XP_063130365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81546,155,130 - 46,290,527 (-)NCBI
RefSeq Acc Id: XR_010057823
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81546,194,963 - 46,334,127 (-)NCBI
Ensembl Acc Id: ENSRNOP00000055674   ⟸   ENSRNOT00000058887
RefSeq Acc Id: XP_038949266   ⟸   XM_039093338
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ARJ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001358941   ⟸   NM_001372012
- UniProtKB: A0A8I5ZK89 (UniProtKB/TrEMBL),   A0A8I6ARJ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949267   ⟸   XM_039093339
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000077193   ⟸   ENSRNOT00000112046
Ensembl Acc Id: ENSRNOP00000094403   ⟸   ENSRNOT00000110516
RefSeq Acc Id: XP_063130365   ⟸   XM_063274295
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ARJ2 (UniProtKB/TrEMBL)
Protein Domains
C2 DOCK-type   DOCKER   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LVA9-F1-model_v2 AlphaFold F1LVA9 1-1868 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699770
Promoter ID:EPDNEW_R10288
Type:multiple initiation site
Name:Dock5_1
Description:dedicator of cytokinesis 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01544,627,779 - 44,627,839EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306872 AgrOrtholog
BioCyc Gene G2FUF-13299 BioCyc
Ensembl Genes ENSRNOG00000024703 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000058887 ENTREZGENE
  ENSRNOT00000058887.6 UniProtKB/TrEMBL
  ENSRNOT00000110516.1 UniProtKB/TrEMBL
  ENSRNOT00000112046 ENTREZGENE
  ENSRNOT00000112046.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1270.350 UniProtKB/TrEMBL
  1.20.58.740 UniProtKB/TrEMBL
  1.25.40.410 UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/TrEMBL
  SH3 Domains UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
  DHR-2 UniProtKB/TrEMBL
  DOCK UniProtKB/TrEMBL
  DOCK-C2 UniProtKB/TrEMBL
  DOCK1/DOCK5 UniProtKB/TrEMBL
  DOCK1_5_SH3 UniProtKB/TrEMBL
  DOCK_C_lobe_A UniProtKB/TrEMBL
  DOCK_C_lobe_C UniProtKB/TrEMBL
  DOCK_N UniProtKB/TrEMBL
  DOCK_N_sub1 UniProtKB/TrEMBL
  DOCKER_Lobe_A UniProtKB/TrEMBL
  DOCKER_Lobe_B UniProtKB/TrEMBL
  DOCKER_Lobe_C UniProtKB/TrEMBL
  SH3-like_dom UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
NCBI Gene 305987 ENTREZGENE
PANTHER PTHR45653 UniProtKB/TrEMBL
  PTHR45653:SF3 UniProtKB/TrEMBL
Pfam Ded_cyto UniProtKB/TrEMBL
  DHR-2_Lobe_B UniProtKB/TrEMBL
  DHR-2_Lobe_C UniProtKB/TrEMBL
  DOCK-C2 UniProtKB/TrEMBL
  DOCK_N UniProtKB/TrEMBL
  SH3_1 UniProtKB/TrEMBL
PhenoGen Dock5 PhenoGen
PROSITE DHR_1 UniProtKB/TrEMBL
  DHR_2 UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000024703 RatGTEx
SMART SH3 UniProtKB/TrEMBL
Superfamily-SCOP ARM-type_fold UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
UniProt A0A8I5ZK89 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ARJ2 ENTREZGENE, UniProtKB/TrEMBL
  F1LVA9_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Dock5  dedicator of cytokinesis 5   Dock5_predicted  dedicator of cytokinesis 5 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Dock5_predicted  dedicator of cytokinesis 5 (predicted)      Symbol and Name status set to approved 70820 APPROVED