Gene: Sympk (symplekin) Rattus norvegicus
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Symbol: Sympk
Name: symplekin
Description: INVOLVED IN mRNA polyadenylation (ortholog); negative regulation of protein binding (ortholog); positive regulation of protein dephosphorylation (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; mRNA decay pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 4-amino-2,6-dinitrotoluene
AGR Description: Predicted to be involved in mRNA polyadenylation, negative regulation of protein binding activity, and positive regulation of protein dephosphorylation; predicted to localize to the cytosol, intracellular organelle, and plasma membrane; orthologous to human SYMPK (symplekin).
Merged Description: Predicted to be involved in mRNA polyadenylation, negative regulation of protein binding activity, and positive regulation of protein dephosphorylation; predicted to localize to the cytosol, intracellular organelle, and plasma membrane; orthologous to human SYMPK (symplekin); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; mRNA decay pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hepatocyte nuclear factor 3 gamma; Hfn3g; HNF-3G; LOC292683
Orthologs:
Homo sapiens (human) : SYMPK (symplekin)  HGNC  Alliance
Mus musculus (house mouse) : Sympk (symplekin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sympk (symplekin)
Pan paniscus (bonobo/pygmy chimpanzee) : SYMPK (symplekin)
Canis lupus familiaris (dog) : SYMPK (symplekin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sympk (symplekin)
Sus scrofa (pig) : SYMPK (symplekin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0179,931,097 - 79,959,461 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0181,190,967 - 81,219,274 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4178,377,890 - 78,407,581 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1178,458,914 - 78,485,679 (+)NCBI
Celera173,138,479 - 73,166,767 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sympk
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306735
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.