Bach1 (BTB domain and CNC homolog 1) - Rat Genome Database

Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Bach1 (BTB domain and CNC homolog 1) Rattus norvegicus
Analyze
Symbol: Bach1
Name: BTB domain and CNC homolog 1
RGD ID: 1306693
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription repressor activity, RNA polymerase II-specific; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in DNA repair and regulation of DNA-templated transcription. Predicted to act upstream of or within DNA-templated transcription elongation and regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of RNA polymerase II transcription regulator complex. Orthologous to human BACH1 (BTB domain and CNC homolog 1); INTERACTS WITH 4-amino-2,6-dinitrotoluene; bisphenol A; bromobenzene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: BTB and CNC homology 1 ; BTB and CNC homology 1 transcription factor; BTB and CNC homology 1, basic leucine zipper transcription factor 1; LOC100911490; LOC103690154; LOC304127; transcription regulator protein BACH1; transcription regulator protein BACH1-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21126,939,429 - 26,974,876 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1126,939,480 - 26,972,447 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1135,637,561 - 35,670,105 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01128,337,824 - 28,370,368 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01127,526,892 - 27,559,119 (+)NCBIRnor_WKY
Rnor_6.01127,364,913 - 27,398,713 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,598,719 - 27,611,811 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,364,916 - 27,398,842 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01131,133,137 - 31,153,652 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01131,219,581 - 31,228,721 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41127,467,207 - 27,500,173 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1126,683,083 - 26,716,048 (+)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-selegiline  (ISO)
(E)-cinnamyl alcohol  (ISO)
1,2-dimethylhydrazine  (ISO)
1,4-benzoquinone  (ISO)
1,4-phenylenediamine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
17beta-estradiol  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-butoxyethanol  (ISO)
2-tert-butylhydroquinone  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-phenylprop-2-enal  (ISO)
4-amino-2,6-dinitrotoluene  (EXP)
4-hydroxyphenyl retinamide  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzene-1,2,4-triol  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
bromobenzene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
cannabidiol  (ISO)
carbamazepine  (ISO)
carbon monoxide  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chenodeoxycholic acid  (ISO)
cinnamyl alcohol  (ISO)
cisplatin  (ISO)
citraconic acid  (ISO)
clofibrate  (ISO)
cobalt dichloride  (EXP)
cocaine  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
cycloheximide  (ISO)
cyclosporin A  (ISO)
deoxycholic acid  (ISO)
diarsenic trioxide  (ISO)
diclofenac  (ISO)
dicrotophos  (ISO)
dimethyl fumarate  (ISO)
dioxygen  (EXP,ISO)
doxorubicin  (EXP,ISO)
echinacoside  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
ethyl methanesulfonate  (ISO)
ethylene glycol dimethacrylate  (ISO)
fenthion  (ISO)
folic acid  (ISO)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
hemin  (ISO)
hydrogen cyanide  (ISO)
hydrogen peroxide  (EXP,ISO)
hydroquinone  (ISO)
iron trichloride  (ISO)
L-ascorbic acid  (ISO)
leflunomide  (ISO)
leptomycin B  (ISO)
lycopene  (ISO)
manganese(II) chloride  (EXP)
methidathion  (ISO)
methyl methanesulfonate  (ISO)
methylseleninic acid  (ISO)
motexafin gadolinium  (ISO)
N-acetyl-L-cysteine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
phenobarbital  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
potassium cyanide  (ISO)
progesterone  (ISO)
SB 203580  (ISO)
sevoflurane  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (ISO)
sulforaphane  (ISO)
tamoxifen  (ISO)
tartrazine  (ISO)
tetrachloroethene  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
toluene  (ISO)
trichloroethene  (EXP)
urethane  (ISO)
valproic acid  (ISO)
zinc acetate  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8887638   PMID:11301010   PMID:12511571   PMID:16780588   PMID:16791210   PMID:19170764   PMID:21555518   PMID:24035498   PMID:28704479   PMID:34464885  


Genomics

Comparative Map Data
Bach1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21126,939,429 - 26,974,876 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1126,939,480 - 26,972,447 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1135,637,561 - 35,670,105 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01128,337,824 - 28,370,368 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01127,526,892 - 27,559,119 (+)NCBIRnor_WKY
Rnor_6.01127,364,913 - 27,398,713 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,598,719 - 27,611,811 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,364,916 - 27,398,842 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01131,133,137 - 31,153,652 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01131,219,581 - 31,228,721 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41127,467,207 - 27,500,173 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1126,683,083 - 26,716,048 (+)NCBICelera
Cytogenetic Map11q11NCBI
BACH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382129,298,922 - 29,361,894 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl2129,194,071 - 29,630,751 (+)EnsemblGRCh38hg38GRCh38
GRCh372130,671,243 - 30,734,215 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362129,593,091 - 29,656,088 (+)NCBINCBI36Build 36hg18NCBI36
Build 342129,593,607 - 29,640,340NCBI
Celera2115,854,335 - 15,917,330 (+)NCBICelera
Cytogenetic Map21q21.3NCBI
HuRef2116,079,359 - 16,142,364 (+)NCBIHuRef
CHM1_12130,232,876 - 30,295,865 (+)NCBICHM1_1
T2T-CHM13v2.02127,664,831 - 27,727,787 (+)NCBIT2T-CHM13v2.0
Bach1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391687,495,842 - 87,530,234 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1687,495,833 - 87,530,234 (+)EnsemblGRCm39 Ensembl
GRCm381687,698,954 - 87,733,346 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1687,698,945 - 87,733,346 (+)EnsemblGRCm38mm10GRCm38
MGSCv371687,699,199 - 87,733,591 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361687,588,150 - 87,622,542 (+)NCBIMGSCv36mm8
Celera1687,895,225 - 87,930,573 (+)NCBICelera
Cytogenetic Map16C3.3NCBI
Bach1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540728,678,181 - 28,701,399 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540728,678,181 - 28,701,115 (+)NCBIChiLan1.0ChiLan1.0
BACH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12129,126,108 - 29,173,835 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2129,126,107 - 29,173,835 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02115,738,343 - 16,036,760 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
BACH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13124,269,310 - 24,310,369 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3124,269,280 - 24,381,454 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3124,262,076 - 24,305,091 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03124,382,476 - 24,425,729 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3124,382,527 - 24,494,433 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13124,332,784 - 24,375,935 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03124,334,594 - 24,377,719 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03124,807,496 - 24,849,474 (+)NCBIUU_Cfam_GSD_1.0
Bach1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497124,726,917 - 24,750,160 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650012,717,516 - 12,740,656 (-)EnsemblSpeTri2.0
SpeTri2.0NW_00493650012,720,027 - 12,740,717 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BACH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13192,658,300 - 192,697,537 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113192,656,289 - 192,697,536 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213203,110,429 - 203,149,469 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BACH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1262,674,834 - 63,028,825 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl262,877,986 - 62,925,465 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660715,462,068 - 5,510,099 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bach1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474517,321,460 - 17,340,463 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474517,321,379 - 17,343,911 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Bach1
228 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:347
Count of miRNA genes:196
Interacting mature miRNAs:226
Transcripts:ENSRNOT00000002151
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11135331169Rat
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
1641927Alcrsp10Alcohol response QTL 10alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)11843667453436674Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)111647204744285911Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)112295940367959403Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)112328045668280456Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)112328045668280456Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat

Markers in Region
RH143670  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21126,939,861 - 26,940,060 (+)MAPPERmRatBN7.2
Rnor_6.01127,513,399 - 27,513,597NCBIRnor6.0
Rnor_6.01127,365,577 - 27,365,775NCBIRnor6.0
Rnor_5.01131,133,519 - 31,133,717UniSTSRnor5.0
Rnor_5.01130,990,078 - 30,990,276UniSTSRnor5.0
RGSC_v3.41127,467,589 - 27,467,787UniSTSRGSC3.4
Celera1126,683,465 - 26,683,663UniSTS
RH 3.4 Map11136.3UniSTS
Cytogenetic Map11q11UniSTS
RH134801  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21126,957,085 - 26,957,265 (+)MAPPERmRatBN7.2
Rnor_6.01127,530,622 - 27,530,801NCBIRnor6.0
Rnor_6.01127,382,802 - 27,382,981NCBIRnor6.0
Rnor_5.01131,150,742 - 31,150,921UniSTSRnor5.0
Rnor_5.01131,007,303 - 31,007,482UniSTSRnor5.0
RGSC_v3.41127,484,813 - 27,484,992UniSTSRGSC3.4
Celera1126,700,688 - 26,700,867UniSTS
RH 3.4 Map11130.2UniSTS
Cytogenetic Map11q11UniSTS
Bach1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21126,960,896 - 26,961,146 (+)MAPPERmRatBN7.2
Rnor_6.01127,386,613 - 27,386,862NCBIRnor6.0
Rnor_5.01131,011,114 - 31,011,363UniSTSRnor5.0
RGSC_v3.41127,488,624 - 27,488,873UniSTSRGSC3.4
Celera1126,704,499 - 26,704,748UniSTS
Cytogenetic Map11q11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 10 41 30 17 30 43 26 22 10
Low 3 32 16 11 2 11 8 11 31 9 17 1 8
Below cutoff 1 2

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000002151   ⟹   ENSRNOP00000002151
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1126,939,480 - 26,972,447 (+)Ensembl
Rnor_6.0 Ensembl1127,364,916 - 27,398,527 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000083275   ⟹   ENSRNOP00000071976
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1127,382,049 - 27,398,842 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000087021
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1127,598,719 - 27,611,811 (+)Ensembl
RefSeq Acc Id: NM_001107113   ⟹   NP_001100583
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21126,939,480 - 26,972,447 (+)NCBI
Rnor_6.01127,365,195 - 27,398,527 (+)NCBI
Rnor_5.01131,133,137 - 31,153,652 (+)NCBI
Rnor_5.01131,219,581 - 31,228,721 (+)NCBI
RGSC_v3.41127,467,207 - 27,500,173 (+)RGD
Celera1126,683,083 - 26,716,048 (+)RGD
Sequence:
RefSeq Acc Id: XM_017598018   ⟹   XP_017453507
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21126,940,738 - 26,974,876 (+)NCBI
Rnor_6.01127,366,453 - 27,398,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039088437   ⟹   XP_038944365
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21126,940,518 - 26,974,876 (+)NCBI
RefSeq Acc Id: XM_039088438   ⟹   XP_038944366
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21126,939,429 - 26,969,890 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001100583 (Get FASTA)   NCBI Sequence Viewer  
  XP_017453507 (Get FASTA)   NCBI Sequence Viewer  
  XP_038944365 (Get FASTA)   NCBI Sequence Viewer  
  XP_038944366 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM10645 (Get FASTA)   NCBI Sequence Viewer  
  EDM10646 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001100583   ⟸   NM_001107113
- UniProtKB: D4ACD2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017453507   ⟸   XM_017598018
- Peptide Label: isoform X1
- UniProtKB: D4ACD2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000002151   ⟸   ENSRNOT00000002151
RefSeq Acc Id: ENSRNOP00000071976   ⟸   ENSRNOT00000083275
RefSeq Acc Id: XP_038944366   ⟸   XM_039088438
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038944365   ⟸   XM_039088437
- Peptide Label: isoform X1
- UniProtKB: D4ACD2 (UniProtKB/TrEMBL)
Protein Domains
BTB   bZIP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4ACD2-F1-model_v2 AlphaFold D4ACD2 1-739 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306693 AgrOrtholog
BioCyc Gene G2FUF-22038 BioCyc
Ensembl Genes ENSRNOG00000001582 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000059467 Ensembl
Ensembl Protein ENSRNOP00000002151 ENTREZGENE
  ENSRNOP00000002151.4 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000002151 ENTREZGENE
  ENSRNOT00000002151.7 UniProtKB/TrEMBL
Gene3D-CATH Transcription factor, Skn-1-like, DNA-binding domain UniProtKB/TrEMBL
InterPro BTB/POZ-like UniProtKB/TrEMBL
  BTB/POZ_fold UniProtKB/TrEMBL
  bZIP_BACH UniProtKB/TrEMBL
  bZIP_Maf UniProtKB/TrEMBL
  bZIP_sf UniProtKB/TrEMBL
  Euk_TF_DNA-bd UniProtKB/TrEMBL
  TF_bZIP UniProtKB/TrEMBL
KEGG Report rno:304127 UniProtKB/TrEMBL
NCBI Gene 304127 ENTREZGENE
PANTHER AGAP004733-PA UniProtKB/TrEMBL
  TRANSCRIPTION REGULATOR PROTEIN BACH1 UniProtKB/TrEMBL
Pfam BTB UniProtKB/TrEMBL
  bZIP_Maf UniProtKB/TrEMBL
PhenoGen Bach1 PhenoGen
PROSITE BTB UniProtKB/TrEMBL
  BZIP UniProtKB/TrEMBL
  BZIP_BASIC UniProtKB/TrEMBL
SMART BRLZ UniProtKB/TrEMBL
  BTB UniProtKB/TrEMBL
Superfamily-SCOP BTB/POZ_fold UniProtKB/TrEMBL
  Euk_transcr_DNA UniProtKB/TrEMBL
  SSF57959 UniProtKB/TrEMBL
UniProt D4ACD2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Bach1  BTB domain and CNC homolog 1  LOC103690154  transcription regulator protein BACH1-like  Data Merged 737654 PROVISIONAL
2016-05-11 Bach1  BTB domain and CNC homolog 1  Bach1  BTB and CNC homology 1, basic leucine zipper transcription factor 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-06-22 Bach1  BTB and CNC homology 1, basic leucine zipper transcription factor 1  LOC100911490  transcription regulator protein BACH1-like  Data Merged 737654 APPROVED
2014-08-25 LOC103690154  transcription regulator protein BACH1-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-07-05 LOC100911490  transcription regulator protein BACH1-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-09-25 Bach1  BTB and CNC homology 1, basic leucine zipper transcription factor 1  Bach1  BTB and CNC homology 1   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Bach1  BTB and CNC homology 1   Bach1_predicted  BTB and CNC homology 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Bach1_predicted  BTB and CNC homology 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED