Gene: Trmt5 (tRNA methyltransferase 5) Rattus norvegicus
Analyze
Symbol: Trmt5
Name: tRNA methyltransferase 5
Description: ENCODES a protein that exhibits tRNA (guanine(37)-N(1))-methyltransferase activity (inferred); INVOLVED IN mitochondrial tRNA methylation (ortholog); ASSOCIATED WITH Combined Oxidative Phosphorylation Deficiency 26 (ortholog); FOUND IN mitochondrial matrix (ortholog); INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; flutamide
AGR Description: Predicted to have tRNA (guanine-N1-)-methyltransferase activity; predicted to be involved in mitochondrial tRNA methylation and tRNA N1-guanine methylation; predicted to localize to the mitochondrial matrix; orthologous to human TRMT5 (tRNA methyltransferase 5).
Merged Description: Predicted to have tRNA (guanine-N1-)-methyltransferase activity; predicted to be involved in mitochondrial tRNA methylation and tRNA N1-guanine methylation; predicted to localize to the mitochondrial matrix; orthologous to human TRMT5 (tRNA methyltransferase 5); INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362754; RGD1306567; similar to RIKEN cDNA 2610027O18; TRM5 tRNA methyltransferase 5 homolog; TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae); tRNA (guanine(37)-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase; tRNA methyltransferase 5 homolog; tRNA methyltransferase 5 homolog (S. cerevisiae)
Orthologs:
Homo sapiens (human) : TRMT5 (tRNA methyltransferase 5)  HGNC  Alliance
Mus musculus (house mouse) : Trmt5 (TRM5 tRNA methyltransferase 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trmt5 (tRNA methyltransferase 5)
Pan paniscus (bonobo/pygmy chimpanzee) : TRMT5 (tRNA methyltransferase 5)
Canis lupus familiaris (dog) : TRMT5 (tRNA methyltransferase 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trmt5 (tRNA methyltransferase 5)
Sus scrofa (pig) : TRMT5 (tRNA methyltransferase 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0696,164,579 - 96,171,680 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06105,596,366 - 105,603,463 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4695,708,552 - 95,715,602 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1695,712,388 - 95,719,101 (-)NCBI
Celera690,443,075 - 90,450,125 (-)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Trmt5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306567
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.