Advanced Search (OLGA)

Gene: Dync2i1 (dynein 2 intermediate chain 1) Rattus norvegicus

Analyze

Symbol:

Dync2i1

Name:

dynein 2 intermediate chain 1

RGD ID:

1306493

Description:

Predicted to enable dynein light chain binding activity. Predicted to be involved in cilium assembly; embryonic skeletal system morphogenesis; and intraciliary retrograde transport. Predicted to be located in ciliary base; cytosol; and microtubule cytoskeleton. Predicted to be part of cytoplasmic dynein complex. Human ortholog(s) of this gene implicated in short-rib thoracic dysplasia 8 with or without polydactyly. Orthologous to human DYNC2I1 (dynein 2 intermediate chain 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cytoplasmic dynein 2 intermediate chain 1; LOC314523; RGD1306493; similar to hypothetical protein FLJ10300; WD repeat domain 60; WD repeat-containing protein 60; Wdr60

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DYNC2I1 (dynein 2 intermediate chain 1)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Dync2i1 (dynein 2 intermediate chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dync2i1 (dynein 2 intermediate chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DYNC2I1 (dynein 2 intermediate chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DYNC2I1 (dynein 2 intermediate chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dync2i1 (dynein 2 intermediate chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DYNC2I1 (dynein 2 intermediate chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DYNC2I1 (dynein 2 intermediate chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dync2i1 (dynein 2 intermediate chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Dync2i1 (dynein 2 intermediate chain 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	DYNC2I1 (dynein 2 intermediate chain 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	wdr60 (WD repeat domain 60)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG15701	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	C27F2.1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	dync2i1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	143,276,441 - 143,333,006 (-)	NCBI		GRCr8
mRatBN7.2	6	137,133,418 - 137,189,937 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	137,133,418 - 137,188,719 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	140,568,754 - 140,623,876 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	137,193,080 - 137,248,128 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	137,741,103 - 137,796,241 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	144,069,077 - 144,124,975 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	144,069,022 - 144,123,729 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	153,007,323 - 153,063,140 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	143,478,863 - 143,534,960 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	143,485,229 - 143,566,989 (-)	NCBI
Celera	6	134,799,216 - 134,853,660 (-)	NCBI		Celera
Cytogenetic Map	6	q33	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

asphyxiating thoracic dystrophy (ISO)

asphyxiating thoracic dystrophy 1 (ISO)

asphyxiating thoracic dystrophy 3 (ISO)

autistic disorder (ISO)

genetic disease (ISO)

schizophrenia (ISO)

short-rib thoracic dysplasia 8 with or without polydactyly (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

benzo[a]pyrene (ISO)

Benzo[ghi]perylene (ISO)

beta-hexachlorocyclohexane (ISO)

beta-lapachone (ISO)

bisphenol A (EXP)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

chromium(6+) (ISO)

dioxygen (ISO)

epoxiconazole (ISO)

ethanol (ISO)

folic acid (ISO)

FR900359 (ISO)

genistein (EXP)

gentamycin (EXP)

indole-3-methanol (EXP)

methyl methanesulfonate (ISO)

paracetamol (EXP,ISO)

potassium chromate (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

silicon dioxide (ISO)

sunitinib (ISO)

temozolomide (ISO)

tetraphene (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cilium assembly (IEA,ISO)

embryonic skeletal system morphogenesis (IEA,ISO)

intraciliary retrograde transport (IEA,ISO)

intraciliary transport (IEA)

Cellular Component

centrosome (IEA,ISO)

ciliary basal body (IEA,ISO)

ciliary base (IEA,ISO)

cilium (IEA,ISO)

cytoplasmic dynein complex (IEA,ISO)

cytosol (IEA,ISO)

interphase microtubule organizing center (IEA,ISO)

pericentriolar material (IEA,ISO)

spindle pole (IEA,ISO)

Molecular Function

dynein heavy chain binding (IEA)

dynein light chain binding (IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:22326026	PMID:22664934	PMID:23376485	PMID:23910462	PMID:25205765	PMID:25830415

Genomics

Comparative Map Data

Dync2i1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	143,276,441 - 143,333,006 (-)	NCBI		GRCr8
mRatBN7.2	6	137,133,418 - 137,189,937 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	137,133,418 - 137,188,719 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	140,568,754 - 140,623,876 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	137,193,080 - 137,248,128 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	137,741,103 - 137,796,241 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	144,069,077 - 144,124,975 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	144,069,022 - 144,123,729 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	153,007,323 - 153,063,140 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	143,478,863 - 143,534,960 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	143,485,229 - 143,566,989 (-)	NCBI
Celera	6	134,799,216 - 134,853,660 (-)	NCBI		Celera
Cytogenetic Map	6	q33	NCBI

DYNC2I1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	158,839,245 - 158,958,698 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	158,856,558 - 158,956,747 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	158,631,936 - 158,738,880 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	158,342,030 - 158,431,644 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	153,081,253 - 153,173,045 (+)	NCBI		Celera
Cytogenetic Map	7	q36.3	NCBI
HuRef	7	152,387,759 - 152,477,997 (+)	NCBI		HuRef
CHM1_1	7	158,657,218 - 158,746,574 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	160,062,945 - 160,186,808 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	157,852,877 - 157,941,993 (+)	NCBI

Dync2i1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	116,169,881 - 116,226,665 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	116,169,882 - 116,226,642 (-)	Ensembl		GRCm39 Ensembl
GRCm38	12	116,206,261 - 116,263,046 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	116,206,262 - 116,263,022 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	117,445,523 - 117,501,498 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	110,442,837 - 110,464,344 (-)	NCBI		MGSCv36	mm8
MGSCv36	12	116,681,849 - 116,704,995 (-)	NCBI		MGSCv36	mm8
Cytogenetic Map	12	F2	NCBI
cM Map	12	62.65	NCBI

Dync2i1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955579	1,057,680 - 1,124,225 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955579	1,056,291 - 1,124,623 (+)	NCBI	ChiLan1.0	ChiLan1.0

DYNC2I1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	195,350,128 - 195,440,760 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	47,359,578 - 47,451,029 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1	7	162,142,751 - 162,219,783 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	162,140,534 - 162,218,224 (+)	Ensembl	panpan1.1		panPan2

DYNC2I1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	20,810,735 - 20,859,441 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	20,810,345 - 20,859,037 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	21,315,043 - 21,362,048 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	22,541,514 - 22,590,144 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	22,548,896 - 22,590,144 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	20,909,158 - 20,957,846 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	21,493,172 - 21,541,474 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	21,547,449 - 21,595,738 (+)	NCBI		UU_Cfam_GSD_1.0

Dync2i1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	476,896 - 544,500 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936856	725,076 - 792,725 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936856	724,863 - 792,490 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DYNC2I1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	508,276 - 553,968 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	507,163 - 555,142 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	777,589 - 793,372 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DYNC2I1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	126,798,952 - 126,828,361 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666072	23,337,118 - 23,375,865 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dync2i1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624800	209,737 - 300,606 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624800	213,589 - 301,066 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Dync2i1
442 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	143
Count of miRNA genes:	112
Interacting mature miRNAs:	121
Transcripts:	ENSRNOT00000006144
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12801411	Schws8	Schwannoma susceptibility QTL 8			nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	94968928	139968928	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	122549046	140994061	Rat
737976	Pia24	Pristane induced arthritis QTL 24			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	6	112636280	140994061	Rat
2312560	Pur20	Proteinuria QTL 20	2.1	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	125628133	137801795	Rat
1641917	Colcr5	Colorectal carcinoma resistance QTL 5	3.18	0.0009	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	6	122549046	137801795	Rat
61414	Pia3	Pristane induced arthritis QTL 3	4.5		joint integrity trait (VT:0010548)	post-insult time to onset of experimental arthritis (CMO:0001450)	6	94968928	137848904	Rat
71111	Iddm8	Insulin dependent diabetes mellitus QTL 8	1.9	0.002	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	6	105156861	140994061	Rat
1358355	Srcrt4	Stress Responsive Cort QTL 4	6.39		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	100364669	140994061	Rat
2290393	Uae37	Urinary albumin excretion QTL 37		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	65531555	140994061	Rat
731173	Uae22	Urinary albumin excretion QTL 22	10.1		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	65531555	140994061	Rat
8552796	Vie3	Viral induced encephalitis QTL 3	2.6		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	6	96833997	140994061	Rat
2293085	Iddm29	Insulin dependent diabetes mellitus QTL 29	7.66		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	122549046	140286318	Rat

Markers in Region

D6Got189

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	137,216,457 - 137,216,727 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	144,152,817 - 144,153,084	NCBI	Rnor6.0
Rnor_5.0	6	153,089,470 - 153,089,737	UniSTS	Rnor5.0
RGSC_v3.4	6	143,563,372 - 143,563,640	RGD	RGSC3.4
RGSC_v3.4	6	143,563,373 - 143,563,640	UniSTS	RGSC3.4
RGSC_v3.1	6	143,569,560 - 143,569,827	RGD
Celera	6	134,881,693 - 134,881,938	UniSTS
RH 3.4 Map	6	937.4	UniSTS
RH 3.4 Map	6	937.4	RGD
RH 2.0 Map	6	1190.6	RGD
Cytogenetic Map	6	q33	UniSTS

AI103063

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	137,143,148 - 137,143,254 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	144,078,195 - 144,078,300	NCBI	Rnor6.0
Rnor_5.0	6	153,016,441 - 153,016,546	UniSTS	Rnor5.0
RGSC_v3.4	6	143,488,593 - 143,488,698	UniSTS	RGSC3.4
Celera	6	134,808,433 - 134,808,538	UniSTS
RH 3.4 Map	6	944.41	UniSTS
Cytogenetic Map	6	q33	UniSTS

RH133577

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	137,133,448 - 137,133,628 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	144,069,108 - 144,069,287	NCBI	Rnor6.0
Rnor_6.0	6	143,874,524 - 143,874,703	NCBI	Rnor6.0
Rnor_5.0	6	153,007,354 - 153,007,533	UniSTS	Rnor5.0
Rnor_5.0	6	152,815,354 - 152,815,533	UniSTS	Rnor5.0
RGSC_v3.4	6	143,478,894 - 143,479,073	UniSTS	RGSC3.4
Celera	6	134,799,247 - 134,799,426	UniSTS
RH 3.4 Map	6	938.0	UniSTS
Cytogenetic Map	6	q33	UniSTS

BI303067

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	137,165,460 - 137,165,616 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	144,100,501 - 144,100,656	NCBI	Rnor6.0
Rnor_5.0	6	153,038,747 - 153,038,902	UniSTS	Rnor5.0
RGSC_v3.4	6	143,510,901 - 143,511,056	UniSTS	RGSC3.4
Celera	6	134,830,679 - 134,830,834	UniSTS
RH 3.4 Map	6	938.09	UniSTS
Cytogenetic Map	6	q33	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000006144 ⟹ ENSRNOP00000006144

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	137,133,418 - 137,182,645 (-)	Ensembl
Rnor_6.0 Ensembl	6	144,069,077 - 144,123,596 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087845 ⟹ ENSRNOP00000072019

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	137,133,418 - 137,188,719 (-)	Ensembl
Rnor_6.0 Ensembl	6	144,069,022 - 144,123,729 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093919 ⟹ ENSRNOP00000080236

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	137,133,418 - 137,188,719 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099487 ⟹ ENSRNOP00000078104

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	137,133,418 - 137,188,719 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109958 ⟹ ENSRNOP00000083494

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	137,133,418 - 137,188,719 (-)	Ensembl

RefSeq Acc Id:

NM_001191773 ⟹ NP_001178702

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,276,441 - 143,331,574 (-)	NCBI
mRatBN7.2	6	137,133,418 - 137,188,553 (-)	NCBI
Rnor_6.0	6	144,069,077 - 144,123,596 (-)	NCBI
Rnor_5.0	6	153,007,323 - 153,063,140 (-)	NCBI
Celera	6	134,799,216 - 134,853,660 (-)	NCBI

Sequence:

show sequence

ATGGAGCCTGGGAAGAGAAGAACCAAAGATGATACTTGGAAAGCAGATGACCTCAGAAGACACC
TTAAGGCTGCACAATCAGGTAGTCCCAAGGAAGAGAAGAAACTCAGAGAAAAGAAGATGCACAA
GGACTCAGAGTTGGGCACTCCTGAATACAGAGAGCACAAGAGCAGGGACCCAGACCGAGAGGCC
CGGCACAAGGAGAAGACAGTGGAGAGAGACCTGTACAGCTCCACAGAACATCCCCGTGGGGAAC
GAGACCGGGAGAGGCACAAGGAAAGGAGGAAAGATGGGAAAGACCGTGAGAAAGACAAGCTGAA
AGAGAGACATCGAGACCAAGAAGCAGAGAAGTCTCATAGTCGCGGCAAGGACAGAGAGAGAGAG
AAAGACAGAAGGGTCAGGAAAGAAGAGCTCAGGCAGTCCATGGCCTACCATGACCTCCTGGGTC
GAGATGTGCGTGGCCGGCAGATGCTGGAGAAAGTGGAAAAGAAAGTTCATATAGCAAGTAAATT
ACGAATGGAGGAAAGAGAAAGGAGAGACGAAGACTCTGAAAGAGTGGATGAAGATAGAGAAAGA
AGATACCGAGAACGGAAGCTGCAGTATGGTGACAGTAAGGAGAATCCCCTGAATTACTGGCTGT
ATAAGGAGGACGGTGAAAAGAAGCACAGGAAGGTGAAAGATGCAGATCGGGAGAGGAAGCACCG
AGAGAAAAGCAGCACAAGGGAGAAAAAAGACAGACACTCAAAGGAGAAGGGGAGCTCTCTGTCT
GACAGGGAAATAGAAGACAGACACAGAGAGAAGCGGCACAAGGACGGACTGCATTATGATGAGG
AGAGGCGCCGAAGTCACGCGGATAAAAAAGAGAGATCTCTGAAAGAAGAGCACAGGAAAAGGGA
GTCAAAGGAACCTGAAAAGGAAGACAATGGTTTAGAGGCTACTGGGGCTGATGAGTATCTGCCC
AACTTAGAAGATGATTTTGTGGATTATGAAGACGACTTTGAGGTTTGTGATGGAGACGATGACA
GCAACAATGAGCACGAAGCTAAAGAGAAAGCCGACGAGCTTCCTCTGGCCCAGAAAAGGGAAAT
ACAGGAGATTCAAAAGGCGATCAGTGCAGAGAACGAAAGGGTTGGCGAGTTATCTTTGAAAATG
TTTCAGAAGCAAGGTCGGGCAGAGAACACGAAGGAGCCCTGGGCAGATGCAAATGATTCCACTT
CTAGAACCCCTGTTTGTGGAATTTTTGTGGATTTTGCAACAGCTTCACATCGTCAGAAGAGTAG
GAGTCAGGCCCTCAAGCAAAAGACACGAAGTACAAAACTGCTCCGGCTTATTGACTTAGACTTT
TCCTTCACCTTTTCTCTCTTGGACCTACCACCAGTAAATGAATATGACATGTACATTAGGAACT
TTGGGAAAAAAAATACCAAGCAGGCATATGTTCAGTATAATGAAGATAATGTTGAGAGAGACAT
TCAGACTGAAGATATAGAAACCAGGGAAGTATGGACCCAACACCCAGGAGAAGGCACTGTCGTA
TCTGGAGGTAGCGAAGAAAAGGACTTCTCTGATGTCACAGTTGTACCGAAGATTGACACTCCGA
GGTTGTCTAACTTTCTCCGGGCAGCATGCCAGGTGGTTGCTGTTTTGCTTGAAGAGGACCGTTT
GGCAGCTGGACCCAGCTGGATTCCCAGGGCTCAAGACAAAGCTCTGAACATCAGTGACAGCTCC
TCTCAACTGAACACAAGCCTACCGTTTCTTCAGAGTCGGAAAGTATCCTGTTTGCATGCATCTC
GAGTTCAGAGGCAGACCGTGGTCTCTGTTCATGACTTACCTGAAAAGGCTTTTGCTCCGTCTCT
GGATAGCAGGCACCTTCTCTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCCCAGAAGGTTCTG
ATATGTGAGTCAAAGGTCACTTGCTGCTGCTTTAGCCCTTTAAAAGCATTTCTGCTGTTTGCGG
GAACAGTGCATGGCTCTGTGGTTGTGTGGGACTTAAGAGAAGACTCCAGGATACACCATTACGT
GAGACTGAGCAGCTGTTTCTGGGCTTTCAGGACCCCAACATTCTCCACTGATGGAATCCTCACA
TCGGTGAACCACCGAAGCCCTCTTCAAGCCATAGAGCCGGTTGCCACATCTGCCTACAAAAAAC
AGAGCTTTGTGCTTTCACCCTTTTCTACTCAAGAAGAAATGGCAGGCTTGTCATTTCACATCGC
TTCCCTGGATGAGAGTGGGGTTCTCAATGTATGGGTGGTTGTTGAATTACCAAAAGCAGATATC
TCAGGTTCAATGAGTGATTTAGGTCTGATACCTGGAGGGAGGATCAAGTTGGTGCACAGTACTG
TAATCCAACTGGGCCACAGTCTTTCTCATAAAGATGGTGAACTGTGGGGGTCCACACAGACACT
GAGTGTCAAATTCCTGCCTTCGGATCCTAATCACTTCGTTGTTGGCACCGACATGGGACTTATA
AGTCACAGTACCAGGCAAGATTGGAGAGTCTCTCCCAAGGTGTTCAAACCTCAGCAACATGGTG
TCAGACCAATAAAAGTTAACGTGATTGATTTTTCACCGTTCGAAGAAACAGTATTCTTGGCTGG
CTGTTCCGATGGAAGCATCAGGCTACACCAGCTGACGTCTGAGAGGCCCATCATGCAGTGGGAC
AACAGCACCAGTGGCCGCTCTGTCACCAGTCTGCAGTGGTCCCCGACAAGGCCCGCTGTGTTCC
TGGTCCAGGATGATGCGTCTAGGATCTATGTTTGGGATCTTCTTGAGAATGACCTGGGTCCTGT
GGCCCAGCAGCCCATCTCTCCAGATAAGCTTGTGGCCATGACTATCGTGGGGGAACCCGAGAAG
ACCAGTGGTAGCTTTGTGGCCCTGGTGTTGGCCAGGACCTCTGGTACAGTCGACATCCAGAACC
TGAAGAGGCGGTGGACCACCCCGGCAGCAGATGAGCATAGCCAGCTGCATCTGCTTCTTCAGAA
ATGAAGACCTAATGTCAGGAGAATGATGGGTACATGAGCCTTGATTACAGATGGATCCCTTCAC
TCTGTGTCTATGTGACTTTGTGTACATAGAGTGTGTATATTCTGTACATAATTTGCTTTAGAAG
AGCAGTGCTTTGGTATTCCCAGGAAATAAATCACTATTTTTAATGGAAACAGTGAA

hide sequence

RefSeq Acc Id:

XM_006240688 ⟹ XP_006240750

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,276,448 - 143,331,745 (-)	NCBI
mRatBN7.2	6	137,133,418 - 137,188,725 (-)	NCBI
Rnor_6.0	6	144,069,077 - 144,123,762 (-)	NCBI
Rnor_5.0	6	153,007,323 - 153,063,140 (-)	NCBI

Sequence:

show sequence

GCGACTTCGGCCCGTTGCTAGGAGGCAGGGACGCCGGCCCTCCCGGGACCCGCGTCGCGGCAGG
CCCTAGCAGGCTAGTCGAGCTGAGCGACGGCGGGCTTGTCTTCCTCCGGTGGCCCGCGCCTGTT
GGGCTGAAGACACGCGGCTGCCCGGGCCTCGAGGAGCGATGGAGCCTGGGAAGCTCCAGGTGCG
GTTTGTGGAGGAGTTTCTGGACTCATCCAGAGGCGTGGCTGAGTGTCAACTTAAGGAAGTCACA
GGACACCTGAAAAAAAAATGCCGAAAGAGAAGAACCAAAGATGATACTTGGAAAGCAGATGACC
TCAGAAGACACCTTAAGGCTGCACAATCAGGTAGTCCCAAGGAAGAGAAGAAACTCAGAGAAAA
GAAGATGCACAAGGACTCAGAGTTGGGCACTCCTGAATACAGAGAGCACAAGAGCAGGGACCCA
GACCGAGAGGCCCGGCACAAGGAGAAGACAGTGGAGAGAGACCTGTACAGCTCCACAGAACATC
CCCGTGGGGAACGAGACCGGGAGAGGCACAAGGAAAGGAGGAAAGATGGGAAAGACCGTGAGAA
AGACAAGCTGAAAGAGAGACATCGAGACCAAGAAGCAGAGAAGTCTCATAGTCGCGGCAAGGAC
AGAGAGAGAGAGAAAGACAGAAGGGTCAGGAAAGAAGAGCTCAGGCAGTCCATGGCCTACCATG
ACCTCCTGGGTCGAGATGTGCGTGGCCGGCAGATGCTGGAGAAAGTGGAAAAGAAAGTTCATAT
AGCAAGTAAATTACGAATGGAGGAAAGAGAAAGGAGAGACGAAGACTCTGAAAGAGTGGATGAA
GATAGAGAAAGAAGATACCGAGAACGGAAGCTGCAGTATGGTGACAGTAAGGAGAATCCCCTGA
ATTACTGGCTGTATAAGGAGGACGGTGAAAAGAAGCACAGGAAGGTGAAAGATGCAGATCGGGA
GAGGAAGCACCGAGAGAAAAGCAGCACAAGGGAGAAAAAAGACAGACACTCAAAGGAGAAGGGG
AGCTCTCTGTCTGACAGGGAAATAGAAGACAGACACAGAGAGAAGCGGCACAAGGACGGACTGC
ATTATGATGAGGAGAGGCGCCGAAGTCACGCGGATAAAAAAGAGAGATCTCTGAAAGAAGAGCA
CAGGAAAAGGGAGTCAAAGGAACCTGAAAAGGAAGACAATGGTTTAGAGGCTACTGGGGCTGAT
GAGTATCTGCCCAACTTAGAAGATGATTTTGTGGATTATGAAGACGACTTTGAGGTTTGTGATG
GAGACGATGACAGCAACAATGAGCACGAAGCTAAAGAGAAAGCCGACGAGCTTCCTCTGGCCCA
GAAAAGGGAAATACAGGAGATTCAAAAGGCGATCAGTGCAGAGAACGAAAGGGTTGGCGAGTTA
TCTTTGAAAATGTTTCAGAAGCAAGGTCGGGCAGAGAACACGAAGGAGCCCTGGGCAGATGCAA
ATGATTCCACTTCTAGAACCCCTGTTTGTGGAATTTTTGTGGATTTTGCAACAGCTTCACATCG
TCAGAAGAGTAGGAGTCAGGCCCTCAAGCAAAAGACACGAAGTACAAAACTGCTCCGGCTTATT
GACTTAGACTTTTCCTTCACCTTTTCTCTCTTGGACCTACCACCAGTAAATGAATATGACATGT
ACATTAGGAACTTTGGGAAAAAAAATACCAAGCAGGCATATGTTCAGTATAATGAAGATAATGT
TGAGAGAGACATTCAGACTGAAGATATAGAAACCAGGGAAGTATGGACCCAACACCCAGGAGAA
GGCACTGTCGTATCTGGAGGTAGCGAAGAAAAGGACTTCTCTGATGTCACAGTTGTACCGAAGA
TTGACACTCCGAGGTTGTCTAACTTTCTCCGGGCAGCATGCCAGGTGGTTGCTGTTTTGCTTGA
AGAGGACCGTTTGGCAGCTGGACCCAGCTGGATTCCCAGGGCTCAAGACAAAGCTCTGAACATC
AGTGACAGCTCCTCTCAACTGAACACAAGCCTACCGTTTCTTCAGAGTCGGAAAGTATCCTGTT
TGCATGCATCTCGAGTTCAGAGGCAGACCGTGGTCTCTGTTCATGACTTACCTGAAAAGGCTTT
TGCTCCGTCTCTGGATAGCAGGCACCTTCTCTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCC
CAGAAGGTTCTGATATGTGAGTCAAAGGTCACTTGCTGCTGCTTTAGCCCTTTAAAAGCATTTC
TGCTGTTTGCGGGAACAGTGCATGGCTCTGTGGTTGTGTGGGACTTAAGAGAAGACTCCAGGAT
ACACCATTACGTGAGACTGAGCAGCTGTTTCTGGGCTTTCAGGACCCCAACATTCTCCACTGAT
GGAATCCTCACATCGGTGAACCACCGAAGCCCTCTTCAAGCCATAGAGCCGGTTGCCACATCTG
CCTACAAAAAACAGAGCTTTGTGCTTTCACCCTTTTCTACTCAAGAAGAAATGGCAGGCTTGTC
ATTTCACATCGCTTCCCTGGATGAGAGTGGGGTTCTCAATGTATGGGTGGTTGTTGAATTACCA
AAAGCAGATATCTCAGGTTCAATGAGTGATTTAGGTCTGATACCTGGAGGGAGGATCAAGTTGG
TGCACAGTACTGTAATCCAACTGGGCCACAGTCTTTCTCATAAAGATGGTGAACTGTGGGGGTC
CACACAGACACTGAGTGTCAAATTCCTGCCTTCGGATCCTAATCACTTCGTTGTTGGCACCGAC
ATGGGACTTATAAGTCACAGTACCAGGCAAGATTGGAGAGTCTCTCCCAAGGTGTTCAAACCTC
AGCAACATGGTGTCAGACCAATAAAAGTTAACGTGATTGATTTTTCACCGTTCGAAGAAACAGT
ATTCTTGGCTGGCTGTTCCGATGGAAGCATCAGGCTACACCAGCTGACGTCTGAGAGGCCCATC
ATGCAGTGGGACAACAGCACCAGTGGCCGCTCTGTCACCAGTCTGCAGTGGTCCCCGACAAGGC
CCGCTGTGTTCCTGGTCCAGGATGATGCGTCTAGGATCTATGTTTGGGATCTTCTTGAGAATGA
CCTGGGTCCTGTGGCCCAGCAGCCCATCTCTCCAGATAAGCTTGTGGCCATGACTATCGTGGGG
GAACCCGAGAAGACCAGTGGTAGCTTTGTGGCCCTGGTGTTGGCCAGGACCTCTGGTACAGTCG
ACATCCAGAACCTGAAGAGGCGGTGGACCACCCCGGCAGCAGATGAGCATAGCCAGCTGCATCT
GCTTCTTCAGAAATGAAGACCTAATGTCAGGAGAATGATGGGTACATGAGCCTTGATTACAGAT
GGATCCCTTCACTCTGTGTCTATGTGACTTTGTGTACATAGAGTGTGTATATTCTGTACATAAT
TTGCTTTAGAAGAGCAGTGCTTTGGTATTCCCAGGAAATAAATCACTATTTTTAATGGAAACAG
TGAA

hide sequence

RefSeq Acc Id:

XM_017594193 ⟹ XP_017449682

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,276,448 - 143,331,745 (-)	NCBI
mRatBN7.2	6	137,133,418 - 137,188,725 (-)	NCBI
Rnor_6.0	6	144,069,077 - 144,123,762 (-)	NCBI

Sequence:

show sequence

GCGACTTCGGCCCGTTGCTAGGAGGCAGGGACGCCGGCCCTCCCGGGACCCGCGTCGCGGCAGG
CCCTAGCAGGCTAGTCGAGCTGAGCGACGGCGGGCTTGTCTTCCTCCGGTGGCCCGCGCCTGTT
GGGCTGAAGACACGCGGCTGCCCGGGCCTCGAGGAGCGATGGAGCCTGGGAAGCTCCAGGTGCG
GTTTGTGGAGGAGTTTCTGGACTCATCCAGAGGCGTGGCTGAGTGTCAACTTAAGGAAGTCACA
GGACACCTGAAAAAAAAATGCCGAAAGGCTGCACAATCAGGTAGTCCCAAGGAAGAGAAGAAAC
TCAGAGAAAAGAAGATGCACAAGGACTCAGAGTTGGGCACTCCTGAATACAGAGAGCACAAGAG
CAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAAGACAGTGGAGAGAGACCTGTACAGCTCC
ACAGAACATCCCCGTGGGGAACGAGACCGGGAGAGGCACAAGGAAAGGAGGAAAGATGGGAAAG
ACCGTGAGAAAGACAAGCTGAAAGAGAGACATCGAGACCAAGAAGCAGAGAAGTCTCATAGTCG
CGGCAAGGACAGAGAGAGAGAGAAAGACAGAAGGGTCAGGAAAGAAGAGCTCAGGCAGTCCATG
GCCTACCATGACCTCCTGGGTCGAGATGTGCGTGGCCGGCAGATGCTGGAGAAAGTGGAAAAGA
AAGTTCATATAGCAAGTAAATTACGAATGGAGGAAAGAGAAAGGAGAGACGAAGACTCTGAAAG
AGTGGATGAAGATAGAGAAAGAAGATACCGAGAACGGAAGCTGCAGTATGGTGACAGTAAGGAG
AATCCCCTGAATTACTGGCTGTATAAGGAGGACGGTGAAAAGAAGCACAGGAAGGTGAAAGATG
CAGATCGGGAGAGGAAGCACCGAGAGAAAAGCAGCACAAGGGAGAAAAAAGACAGACACTCAAA
GGAGAAGGGGAGCTCTCTGTCTGACAGGGAAATAGAAGACAGACACAGAGAGAAGCGGCACAAG
GACGGACTGCATTATGATGAGGAGAGGCGCCGAAGTCACGCGGATAAAAAAGAGAGATCTCTGA
AAGAAGAGCACAGGAAAAGGGAGTCAAAGGAACCTGAAAAGGAAGACAATGGTTTAGAGGCTAC
TGGGGCTGATGAGTATCTGCCCAACTTAGAAGATGATTTTGTGGATTATGAAGACGACTTTGAG
GTTTGTGATGGAGACGATGACAGCAACAATGAGCACGAAGCTAAAGAGAAAGCCGACGAGCTTC
CTCTGGCCCAGAAAAGGGAAATACAGGAGATTCAAAAGGCGATCAGTGCAGAGAACGAAAGGGT
TGGCGAGTTATCTTTGAAAATGTTTCAGAAGCAAGGTCGGGCAGAGAACACGAAGGAGCCCTGG
GCAGATGCAAATGATTCCACTTCTAGAACCCCTGTTTGTGGAATTTTTGTGGATTTTGCAACAG
CTTCACATCGTCAGAAGAGTAGGAGTCAGGCCCTCAAGCAAAAGACACGAAGTACAAAACTGCT
CCGGCTTATTGACTTAGACTTTTCCTTCACCTTTTCTCTCTTGGACCTACCACCAGTAAATGAA
TATGACATGTACATTAGGAACTTTGGGAAAAAAAATACCAAGCAGGCATATGTTCAGTATAATG
AAGATAATGTTGAGAGAGACATTCAGACTGAAGATATAGAAACCAGGGAAGTATGGACCCAACA
CCCAGGAGAAGGCACTGTCGTATCTGGAGGTAGCGAAGAAAAGGACTTCTCTGATGTCACAGTT
GTACCGAAGATTGACACTCCGAGGTTGTCTAACTTTCTCCGGGCAGCATGCCAGGTGGTTGCTG
TTTTGCTTGAAGAGGACCGTTTGGCAGCTGGACCCAGCTGGATTCCCAGGGCTCAAGACAAAGC
TCTGAACATCAGTGACAGCTCCTCTCAACTGAACACAAGCCTACCGTTTCTTCAGAGTCGGAAA
GTATCCTGTTTGCATGCATCTCGAGTTCAGAGGCAGACCGTGGTCTCTGTTCATGACTTACCTG
AAAAGGCTTTTGCTCCGTCTCTGGATAGCAGGCACCTTCTCTGTGTGTGGGATATTTGGCAGCC
TTCAGGGCCCCAGAAGGTTCTGATATGTGAGTCAAAGGTCACTTGCTGCTGCTTTAGCCCTTTA
AAAGCATTTCTGCTGTTTGCGGGAACAGTGCATGGCTCTGTGGTTGTGTGGGACTTAAGAGAAG
ACTCCAGGATACACCATTACGTGAGACTGAGCAGCTGTTTCTGGGCTTTCAGGACCCCAACATT
CTCCACTGATGGAATCCTCACATCGGTGAACCACCGAAGCCCTCTTCAAGCCATAGAGCCGGTT
GCCACATCTGCCTACAAAAAACAGAGCTTTGTGCTTTCACCCTTTTCTACTCAAGAAGAAATGG
CAGGCTTGTCATTTCACATCGCTTCCCTGGATGAGAGTGGGGTTCTCAATGTATGGGTGGTTGT
TGAATTACCAAAAGCAGATATCTCAGGTTCAATGAGTGATTTAGGTCTGATACCTGGAGGGAGG
ATCAAGTTGGTGCACAGTACTGTAATCCAACTGGGCCACAGTCTTTCTCATAAAGATGGTGAAC
TGTGGGGGTCCACACAGACACTGAGTGTCAAATTCCTGCCTTCGGATCCTAATCACTTCGTTGT
TGGCACCGACATGGGACTTATAAGTCACAGTACCAGGCAAGATTGGAGAGTCTCTCCCAAGGTG
TTCAAACCTCAGCAACATGGTGTCAGACCAATAAAAGTTAACGTGATTGATTTTTCACCGTTCG
AAGAAACAGTATTCTTGGCTGGCTGTTCCGATGGAAGCATCAGGCTACACCAGCTGACGTCTGA
GAGGCCCATCATGCAGTGGGACAACAGCACCAGTGGCCGCTCTGTCACCAGTCTGCAGTGGTCC
CCGACAAGGCCCGCTGTGTTCCTGGTCCAGGATGATGCGTCTAGGATCTATGTTTGGGATCTTC
TTGAGAATGACCTGGGTCCTGTGGCCCAGCAGCCCATCTCTCCAGATAAGCTTGTGGCCATGAC
TATCGTGGGGGAACCCGAGAAGACCAGTGGTAGCTTTGTGGCCCTGGTGTTGGCCAGGACCTCT
GGTACAGTCGACATCCAGAACCTGAAGAGGCGGTGGACCACCCCGGCAGCAGATGAGCATAGCC
AGCTGCATCTGCTTCTTCAGAAATGAAGACCTAATGTCAGGAGAATGATGGGTACATGAGCCTT
GATTACAGATGGATCCCTTCACTCTGTGTCTATGTGACTTTGTGTACATAGAGTGTGTATATTC
TGTACATAATTTGCTTTAGAAGAGCAGTGCTTTGGTATTCCCAGGAAATAAATCACTATTTTTA
ATGGAAACAGTGAA

hide sequence

RefSeq Acc Id:

XM_017594194 ⟹ XP_017449683

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,276,448 - 143,331,735 (-)	NCBI
mRatBN7.2	6	137,133,418 - 137,188,526 (-)	NCBI
Rnor_6.0	6	144,069,077 - 144,123,575 (-)	NCBI

Sequence:

show sequence

GTGCCGCGGGGCCCGGCCGGCGCCCGCGTTCCTCTACTCTTTCTTGGCAATGGAGACCGGGTTT
CTCCTCGGCCTGAACTTAGGAGAGAGCTGGAGGCGGAGTTTGGGTCGAGGTCTCAGCTCTGCTG
ATGCCTCTCACTTCTTAGCTCCAGGTGCGGTTTGTGGAGGAGTTTCTGGACTCATCCAGAGGCG
TGGCTGAGTGTCAACTTAAGGAAGTCACAGGACACCTGAAAAAAAAATGCCGAAAGGTGAAACA
TGAGTCTCTTTAAGAGAAGAACCAAAGATGATACTTGGAAAGCAGATGACCTCAGAAGACACCT
TAAGGCTGCACAATCAGGTAGTCCCAAGGAAGAGAAGAAACTCAGAGAAAAGAAGATGCACAAG
GACTCAGAGTTGGGCACTCCTGAATACAGAGAGCACAAGAGCAGGGACCCAGACCGAGAGGCCC
GGCACAAGGAGAAGACAGTGGAGAGAGACCTGTACAGCTCCACAGAACATCCCCGTGGGGAACG
AGACCGGGAGAGGCACAAGGAAAGGAGGAAAGATGGGAAAGACCGTGAGAAAGACAAGCTGAAA
GAGAGACATCGAGACCAAGAAGCAGAGAAGTCTCATAGTCGCGGCAAGGACAGAGAGAGAGAGA
AAGACAGAAGGGTCAGGAAAGAAGAGCTCAGGCAGTCCATGGCCTACCATGACCTCCTGGGTCG
AGATGTGCGTGGCCGGCAGATGCTGGAGAAAGTGGAAAAGAAAGTTCATATAGCAAGTAAATTA
CGAATGGAGGAAAGAGAAAGGAGAGACGAAGACTCTGAAAGAGTGGATGAAGATAGAGAAAGAA
GATACCGAGAACGGAAGCTGCAGTATGGTGACAGTAAGGAGAATCCCCTGAATTACTGGCTGTA
TAAGGAGGACGGTGAAAAGAAGCACAGGAAGGTGAAAGATGCAGATCGGGAGAGGAAGCACCGA
GAGAAAAGCAGCACAAGGGAGAAAAAAGACAGACACTCAAAGGAGAAGGGGAGCTCTCTGTCTG
ACAGGGAAATAGAAGACAGACACAGAGAGAAGCGGCACAAGGACGGACTGCATTATGATGAGGA
GAGGCGCCGAAGTCACGCGGATAAAAAAGAGAGATCTCTGAAAGAAGAGCACAGGAAAAGGGAG
TCAAAGGAACCTGAAAAGGAAGACAATGGTTTAGAGGCTACTGGGGCTGATGAGTATCTGCCCA
ACTTAGAAGATGATTTTGTGGATTATGAAGACGACTTTGAGGTTTGTGATGGAGACGATGACAG
CAACAATGAGCACGAAGCTAAAGAGAAAGCCGACGAGCTTCCTCTGGCCCAGAAAAGGGAAATA
CAGGAGATTCAAAAGGCGATCAGTGCAGAGAACGAAAGGGTTGGCGAGTTATCTTTGAAAATGT
TTCAGAAGCAAGGTCGGGCAGAGAACACGAAGGAGCCCTGGGCAGATGCAAATGATTCCACTTC
TAGAACCCCTGTTTGTGGAATTTTTGTGGATTTTGCAACAGCTTCACATCGTCAGAAGAGTAGG
AGTCAGGCCCTCAAGCAAAAGACACGAAGTACAAAACTGCTCCGGCTTATTGACTTAGACTTTT
CCTTCACCTTTTCTCTCTTGGACCTACCACCAGTAAATGAATATGACATGTACATTAGGAACTT
TGGGAAAAAAAATACCAAGCAGGCATATGTTCAGTATAATGAAGATAATGTTGAGAGAGACATT
CAGACTGAAGATATAGAAACCAGGGAAGTATGGACCCAACACCCAGGAGAAGGCACTGTCGTAT
CTGGAGGTAGCGAAGAAAAGGACTTCTCTGATGTCACAGTTGTACCGAAGATTGACACTCCGAG
GTTGTCTAACTTTCTCCGGGCAGCATGCCAGGTGGTTGCTGTTTTGCTTGAAGAGGACCGTTTG
GCAGCTGGACCCAGCTGGATTCCCAGGGCTCAAGACAAAGCTCTGAACATCAGTGACAGCTCCT
CTCAACTGAACACAAGCCTACCGTTTCTTCAGAGTCGGAAAGTATCCTGTTTGCATGCATCTCG
AGTTCAGAGGCAGACCGTGGTCTCTGTTCATGACTTACCTGAAAAGGCTTTTGCTCCGTCTCTG
GATAGCAGGCACCTTCTCTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCCCAGAAGGTTCTGA
TATGTGAGTCAAAGGTCACTTGCTGCTGCTTTAGCCCTTTAAAAGCATTTCTGCTGTTTGCGGG
AACAGTGCATGGCTCTGTGGTTGTGTGGGACTTAAGAGAAGACTCCAGGATACACCATTACGTG
AGACTGAGCAGCTGTTTCTGGGCTTTCAGGACCCCAACATTCTCCACTGATGGAATCCTCACAT
CGGTGAACCACCGAAGCCCTCTTCAAGCCATAGAGCCGGTTGCCACATCTGCCTACAAAAAACA
GAGCTTTGTGCTTTCACCCTTTTCTACTCAAGAAGAAATGGCAGGCTTGTCATTTCACATCGCT
TCCCTGGATGAGAGTGGGGTTCTCAATGTATGGGTGGTTGTTGAATTACCAAAAGCAGATATCT
CAGGTTCAATGAGTGATTTAGGTCTGATACCTGGAGGGAGGATCAAGTTGGTGCACAGTACTGT
AATCCAACTGGGCCACAGTCTTTCTCATAAAGATGGTGAACTGTGGGGGTCCACACAGACACTG
AGTGTCAAATTCCTGCCTTCGGATCCTAATCACTTCGTTGTTGGCACCGACATGGGACTTATAA
GTCACAGTACCAGGCAAGATTGGAGAGTCTCTCCCAAGGTGTTCAAACCTCAGCAACATGGTGT
CAGACCAATAAAAGTTAACGTGATTGATTTTTCACCGTTCGAAGAAACAGTATTCTTGGCTGGC
TGTTCCGATGGAAGCATCAGGCTACACCAGCTGACGTCTGAGAGGCCCATCATGCAGTGGGACA
ACAGCACCAGTGGCCGCTCTGTCACCAGTCTGCAGTGGTCCCCGACAAGGCCCGCTGTGTTCCT
GGTCCAGGATGATGCGTCTAGGATCTATGTTTGGGATCTTCTTGAGAATGACCTGGGTCCTGTG
GCCCAGCAGCCCATCTCTCCAGATAAGCTTGTGGCCATGACTATCGTGGGGGAACCCGAGAAGA
CCAGTGGTAGCTTTGTGGCCCTGGTGTTGGCCAGGACCTCTGGTACAGTCGACATCCAGAACCT
GAAGAGGCGGTGGACCACCCCGGCAGCAGATGAGCATAGCCAGCTGCATCTGCTTCTTCAGAAA
TGAAGACCTAATGTCAGGAGAATGATGGGTACATGAGCCTTGATTACAGATGGATCCCTTCACT
CTGTGTCTATGTGACTTTGTGTACATAGAGTGTGTATATTCTGTACATAATTTGCTTTAGAAGA
GCAGTGCTTTGGTATTCCCAGGAAATAAATCACTATTTTTAATGGAAACAGTGAA

hide sequence

RefSeq Acc Id:

XM_017594195 ⟹ XP_017449684

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,276,448 - 143,331,762 (-)	NCBI
mRatBN7.2	6	137,133,418 - 137,188,724 (-)	NCBI
Rnor_6.0	6	144,069,077 - 144,123,762 (-)	NCBI

Sequence:

show sequence

GCGACTTCGGCCCGTTGCTAGGAGGCAGGGACGCCGGCCCTCCCGGGACCCGCGTCGCGGCAGG
CCCTAGCAGGCTAGTCGAGCTGAGCGACGGCGGGCTTGTCTTCCTCCGGTGGCCCGCGCCTGTT
GGGCTGAAGACACGCGGCTGCCCGGGCCTCGAGGAGCGATGGAGCCTGGGAAGGCTGCACAATC
AGGTAGTCCCAAGGAAGAGAAGAAACTCAGAGAAAAGAAGATGCACAAGGACTCAGAGTTGGGC
ACTCCTGAATACAGAGAGCACAAGAGCAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAAGA
CAGTGGAGAGAGACCTGTACAGCTCCACAGAACATCCCCGTGGGGAACGAGACCGGGAGAGGCA
CAAGGAAAGGAGGAAAGATGGGAAAGACCGTGAGAAAGACAAGCTGAAAGAGAGACATCGAGAC
CAAGAAGCAGAGAAGTCTCATAGTCGCGGCAAGGACAGAGAGAGAGAGAAAGACAGAAGGGTCA
GGAAAGAAGAGCTCAGGCAGTCCATGGCCTACCATGACCTCCTGGGTCGAGATGTGCGTGGCCG
GCAGATGCTGGAGAAAGTGGAAAAGAAAGTTCATATAGCAAGTAAATTACGAATGGAGGAAAGA
GAAAGGAGAGACGAAGACTCTGAAAGAGTGGATGAAGATAGAGAAAGAAGATACCGAGAACGGA
AGCTGCAGTATGGTGACAGTAAGGAGAATCCCCTGAATTACTGGCTGTATAAGGAGGACGGTGA
AAAGAAGCACAGGAAGGTGAAAGATGCAGATCGGGAGAGGAAGCACCGAGAGAAAAGCAGCACA
AGGGAGAAAAAAGACAGACACTCAAAGGAGAAGGGGAGCTCTCTGTCTGACAGGGAAATAGAAG
ACAGACACAGAGAGAAGCGGCACAAGGACGGACTGCATTATGATGAGGAGAGGCGCCGAAGTCA
CGCGGATAAAAAAGAGAGATCTCTGAAAGAAGAGCACAGGAAAAGGGAGTCAAAGGAACCTGAA
AAGGAAGACAATGGTTTAGAGGCTACTGGGGCTGATGAGTATCTGCCCAACTTAGAAGATGATT
TTGTGGATTATGAAGACGACTTTGAGGTTTGTGATGGAGACGATGACAGCAACAATGAGCACGA
AGCTAAAGAGAAAGCCGACGAGCTTCCTCTGGCCCAGAAAAGGGAAATACAGGAGATTCAAAAG
GCGATCAGTGCAGAGAACGAAAGGGTTGGCGAGTTATCTTTGAAAATGTTTCAGAAGCAAGGTC
GGGCAGAGAACACGAAGGAGCCCTGGGCAGATGCAAATGATTCCACTTCTAGAACCCCTGTTTG
TGGAATTTTTGTGGATTTTGCAACAGCTTCACATCGTCAGAAGAGTAGGAGTCAGGCCCTCAAG
CAAAAGACACGAAGTACAAAACTGCTCCGGCTTATTGACTTAGACTTTTCCTTCACCTTTTCTC
TCTTGGACCTACCACCAGTAAATGAATATGACATGTACATTAGGAACTTTGGGAAAAAAAATAC
CAAGCAGGCATATGTTCAGTATAATGAAGATAATGTTGAGAGAGACATTCAGACTGAAGATATA
GAAACCAGGGAAGTATGGACCCAACACCCAGGAGAAGGCACTGTCGTATCTGGAGGTAGCGAAG
AAAAGGACTTCTCTGATGTCACAGTTGTACCGAAGATTGACACTCCGAGGTTGTCTAACTTTCT
CCGGGCAGCATGCCAGGTGGTTGCTGTTTTGCTTGAAGAGGACCGTTTGGCAGCTGGACCCAGC
TGGATTCCCAGGGCTCAAGACAAAGCTCTGAACATCAGTGACAGCTCCTCTCAACTGAACACAA
GCCTACCGTTTCTTCAGAGTCGGAAAGTATCCTGTTTGCATGCATCTCGAGTTCAGAGGCAGAC
CGTGGTCTCTGTTCATGACTTACCTGAAAAGGCTTTTGCTCCGTCTCTGGATAGCAGGCACCTT
CTCTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCCCAGAAGGTTCTGATATGTGAGTCAAAGG
TCACTTGCTGCTGCTTTAGCCCTTTAAAAGCATTTCTGCTGTTTGCGGGAACAGTGCATGGCTC
TGTGGTTGTGTGGGACTTAAGAGAAGACTCCAGGATACACCATTACGTGAGACTGAGCAGCTGT
TTCTGGGCTTTCAGGACCCCAACATTCTCCACTGATGGAATCCTCACATCGGTGAACCACCGAA
GCCCTCTTCAAGCCATAGAGCCGGTTGCCACATCTGCCTACAAAAAACAGAGCTTTGTGCTTTC
ACCCTTTTCTACTCAAGAAGAAATGGCAGGCTTGTCATTTCACATCGCTTCCCTGGATGAGAGT
GGGGTTCTCAATGTATGGGTGGTTGTTGAATTACCAAAAGCAGATATCTCAGGTTCAATGAGTG
ATTTAGGTCTGATACCTGGAGGGAGGATCAAGTTGGTGCACAGTACTGTAATCCAACTGGGCCA
CAGTCTTTCTCATAAAGATGGTGAACTGTGGGGGTCCACACAGACACTGAGTGTCAAATTCCTG
CCTTCGGATCCTAATCACTTCGTTGTTGGCACCGACATGGGACTTATAAGTCACAGTACCAGGC
AAGATTGGAGAGTCTCTCCCAAGGTGTTCAAACCTCAGCAACATGGTGTCAGACCAATAAAAGT
TAACGTGATTGATTTTTCACCGTTCGAAGAAACAGTATTCTTGGCTGGCTGTTCCGATGGAAGC
ATCAGGCTACACCAGCTGACGTCTGAGAGGCCCATCATGCAGTGGGACAACAGCACCAGTGGCC
GCTCTGTCACCAGTCTGCAGTGGTCCCCGACAAGGCCCGCTGTGTTCCTGGTCCAGGATGATGC
GTCTAGGATCTATGTTTGGGATCTTCTTGAGAATGACCTGGGTCCTGTGGCCCAGCAGCCCATC
TCTCCAGATAAGCTTGTGGCCATGACTATCGTGGGGGAACCCGAGAAGACCAGTGGTAGCTTTG
TGGCCCTGGTGTTGGCCAGGACCTCTGGTACAGTCGACATCCAGAACCTGAAGAGGCGGTGGAC
CACCCCGGCAGCAGATGAGCATAGCCAGCTGCATCTGCTTCTTCAGAAATGAAGACCTAATGTC
AGGAGAATGATGGGTACATGAGCCTTGATTACAGATGGATCCCTTCACTCTGTGTCTATGTGAC
TTTGTGTACATAGAGTGTGTATATTCTGTACATAATTTGCTTTAGAAGAGCAGTGCTTTGGTAT
TCCCAGGAAATAAATCACTATTTTTAATGGAAACAGTGAA

hide sequence

RefSeq Acc Id:

XM_017594197 ⟹ XP_017449686

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,276,448 - 143,331,524 (-)	NCBI
mRatBN7.2	6	137,133,418 - 137,188,519 (-)	NCBI
Rnor_6.0	6	144,069,077 - 144,123,575 (-)	NCBI

Sequence:

show sequence

GTGCCGCGGGGCCCGGCCGGCGCCCGCGTTCCTCTACTCTTTCTTGGCAATGGAGACCGGGTTT
CTCCTCGGCCTGAACTTAGGAGAGAGCTGGAGGCGGAGTTTGGGTCGAGGTCTCAGCTCTGCTG
ATGCCTCTCACTTCTTAGCTCCAGAGAAGAACCAAAGATGATACTTGGAAAGCAGATGACCTCA
GAAGACACCTTAAGGCTGCACAATCAGGTAGTCCCAAGGAAGAGAAGAAACTCAGAGAAAAGAA
GATGCACAAGGACTCAGAGTTGGGCACTCCTGAATACAGAGAGCACAAGAGCAGGGACCCAGAC
CGAGAGGCCCGGCACAAGGAGAAGACAGTGGAGAGAGACCTGTACAGCTCCACAGAACATCCCC
GTGGGGAACGAGACCGGGAGAGGCACAAGGAAAGGAGGAAAGATGGGAAAGACCGTGAGAAAGA
CAAGCTGAAAGAGAGACATCGAGACCAAGAAGCAGAGAAGTCTCATAGTCGCGGCAAGGACAGA
GAGAGAGAGAAAGACAGAAGGGTCAGGAAAGAAGAGCTCAGGCAGTCCATGGCCTACCATGACC
TCCTGGGTCGAGATGTGCGTGGCCGGCAGATGCTGGAGAAAGTGGAAAAGAAAGTTCATATAGC
AAGTAAATTACGAATGGAGGAAAGAGAAAGGAGAGACGAAGACTCTGAAAGAGTGGATGAAGAT
AGAGAAAGAAGATACCGAGAACGGAAGCTGCAGTATGGTGACAGTAAGGAGAATCCCCTGAATT
ACTGGCTGTATAAGGAGGACGGTGAAAAGAAGCACAGGAAGGTGAAAGATGCAGATCGGGAGAG
GAAGCACCGAGAGAAAAGCAGCACAAGGGAGAAAAAAGACAGACACTCAAAGGAGAAGGGGAGC
TCTCTGTCTGACAGGGAAATAGAAGACAGACACAGAGAGAAGCGGCACAAGGACGGACTGCATT
ATGATGAGGAGAGGCGCCGAAGTCACGCGGATAAAAAAGAGAGATCTCTGAAAGAAGAGCACAG
GAAAAGGGAGTCAAAGGAACCTGAAAAGGAAGACAATGGTTTAGAGGCTACTGGGGCTGATGAG
TATCTGCCCAACTTAGAAGATGATTTTGTGGATTATGAAGACGACTTTGAGGTTTGTGATGGAG
ACGATGACAGCAACAATGAGCACGAAGCTAAAGAGAAAGCCGACGAGCTTCCTCTGGCCCAGAA
AAGGGAAATACAGGAGATTCAAAAGGCGATCAGTGCAGAGAACGAAAGGGTTGGCGAGTTATCT
TTGAAAATGTTTCAGAAGCAAGGTCGGGCAGAGAACACGAAGGAGCCCTGGGCAGATGCAAATG
ATTCCACTTCTAGAACCCCTGTTTGTGGAATTTTTGTGGATTTTGCAACAGCTTCACATCGTCA
GAAGAGTAGGAGTCAGGCCCTCAAGCAAAAGACACGAAGTACAAAACTGCTCCGGCTTATTGAC
TTAGACTTTTCCTTCACCTTTTCTCTCTTGGACCTACCACCAGTAAATGAATATGACATGTACA
TTAGGAACTTTGGGAAAAAAAATACCAAGCAGGCATATGTTCAGTATAATGAAGATAATGTTGA
GAGAGACATTCAGACTGAAGATATAGAAACCAGGGAAGTATGGACCCAACACCCAGGAGAAGGC
ACTGTCGTATCTGGAGGTAGCGAAGAAAAGGACTTCTCTGATGTCACAGTTGTACCGAAGATTG
ACACTCCGAGGTTGTCTAACTTTCTCCGGGCAGCATGCCAGGTGGTTGCTGTTTTGCTTGAAGA
GGACCGTTTGGCAGCTGGACCCAGCTGGATTCCCAGGGCTCAAGACAAAGCTCTGAACATCAGT
GACAGCTCCTCTCAACTGAACACAAGCCTACCGTTTCTTCAGAGTCGGAAAGTATCCTGTTTGC
ATGCATCTCGAGTTCAGAGGCAGACCGTGGTCTCTGTTCATGACTTACCTGAAAAGGCTTTTGC
TCCGTCTCTGGATAGCAGGCACCTTCTCTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCCCAG
AAGGTTCTGATATGTGAGTCAAAGGTCACTTGCTGCTGCTTTAGCCCTTTAAAAGCATTTCTGC
TGTTTGCGGGAACAGTGCATGGCTCTGTGGTTGTGTGGGACTTAAGAGAAGACTCCAGGATACA
CCATTACGTGAGACTGAGCAGCTGTTTCTGGGCTTTCAGGACCCCAACATTCTCCACTGATGGA
ATCCTCACATCGGTGAACCACCGAAGCCCTCTTCAAGCCATAGAGCCGGTTGCCACATCTGCCT
ACAAAAAACAGAGCTTTGTGCTTTCACCCTTTTCTACTCAAGAAGAAATGGCAGGCTTGTCATT
TCACATCGCTTCCCTGGATGAGAGTGGGGTTCTCAATGTATGGGTGGTTGTTGAATTACCAAAA
GCAGATATCTCAGGTTCAATGAGTGATTTAGGTCTGATACCTGGAGGGAGGATCAAGTTGGTGC
ACAGTACTGTAATCCAACTGGGCCACAGTCTTTCTCATAAAGATGGTGAACTGTGGGGGTCCAC
ACAGACACTGAGTGTCAAATTCCTGCCTTCGGATCCTAATCACTTCGTTGTTGGCACCGACATG
GGACTTATAAGTCACAGTACCAGGCAAGATTGGAGAGTCTCTCCCAAGGTGTTCAAACCTCAGC
AACATGGTGTCAGACCAATAAAAGTTAACGTGATTGATTTTTCACCGTTCGAAGAAACAGTATT
CTTGGCTGGCTGTTCCGATGGAAGCATCAGGCTACACCAGCTGACGTCTGAGAGGCCCATCATG
CAGTGGGACAACAGCACCAGTGGCCGCTCTGTCACCAGTCTGCAGTGGTCCCCGACAAGGCCCG
CTGTGTTCCTGGTCCAGGATGATGCGTCTAGGATCTATGTTTGGGATCTTCTTGAGAATGACCT
GGGTCCTGTGGCCCAGCAGCCCATCTCTCCAGATAAGCTTGTGGCCATGACTATCGTGGGGGAA
CCCGAGAAGACCAGTGGTAGCTTTGTGGCCCTGGTGTTGGCCAGGACCTCTGGTACAGTCGACA
TCCAGAACCTGAAGAGGCGGTGGACCACCCCGGCAGCAGATGAGCATAGCCAGCTGCATCTGCT
TCTTCAGAAATGAAGACCTAATGTCAGGAGAATGATGGGTACATGAGCCTTGATTACAGATGGA
TCCCTTCACTCTGTGTCTATGTGACTTTGTGTACATAGAGTGTGTATATTCTGTACATAATTTG
CTTTAGAAGAGCAGTGCTTTGGTATTCCCAGGAAATAAATCACTATTTTTAATGGAAACAGTGA
A

hide sequence

RefSeq Acc Id:

XM_017594198 ⟹ XP_017449687

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,276,448 - 143,332,971 (-)	NCBI
mRatBN7.2	6	137,133,418 - 137,189,882 (-)	NCBI
Rnor_6.0	6	144,069,077 - 144,124,975 (-)	NCBI

Sequence:

show sequence

TGCTACTCCTAACTTTGAGACAGCTCTCCTAGCTCAGGTAGGGCTGAAGCCCCATGGCAGCTAG
TCCATGTGTGCAACTAGCTATGCAAGAAGGCATCTTAATCTCCACTGGAAGCCATCACTGATTT
GTTTTACTAGCTGAGGTTATTTTCACAGTCTCCCCTGCCTAGTGAATTGTCAGGGGTGGAGGTG
TGAATTTTTCAGTTTCAATCAGTTGCTGTATGACTCAACTGGATGACTACATTTTAGAGGGTTT
TTGTCAGTGATGAAGCACAGGCTGATCGGGAGCAAAGTGGAGAAAGAGAAGAACCAAAGATGAT
ACTTGGAAAGCAGATGACCTCAGAAGACACCTTAAGGCTGCACAATCAGGTAGTCCCAAGGAAG
AGAAGAAACTCAGAGAAAAGAAGATGCACAAGGACTCAGAGTTGGGCACTCCTGAATACAGAGA
GCACAAGAGCAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAAGACAGTGGAGAGAGACCTG
TACAGCTCCACAGAACATCCCCGTGGGGAACGAGACCGGGAGAGGCACAAGGAAAGGAGGAAAG
ATGGGAAAGACCGTGAGAAAGACAAGCTGAAAGAGAGACATCGAGACCAAGAAGCAGAGAAGTC
TCATAGTCGCGGCAAGGACAGAGAGAGAGAGAAAGACAGAAGGGTCAGGAAAGAAGAGCTCAGG
CAGTCCATGGCCTACCATGACCTCCTGGGTCGAGATGTGCGTGGCCGGCAGATGCTGGAGAAAG
TGGAAAAGAAAGTTCATATAGCAAGTAAATTACGAATGGAGGAAAGAGAAAGGAGAGACGAAGA
CTCTGAAAGAGTGGATGAAGATAGAGAAAGAAGATACCGAGAACGGAAGCTGCAGTATGGTGAC
AGTAAGGAGAATCCCCTGAATTACTGGCTGTATAAGGAGGACGGTGAAAAGAAGCACAGGAAGG
TGAAAGATGCAGATCGGGAGAGGAAGCACCGAGAGAAAAGCAGCACAAGGGAGAAAAAAGACAG
ACACTCAAAGGAGAAGGGGAGCTCTCTGTCTGACAGGGAAATAGAAGACAGACACAGAGAGAAG
CGGCACAAGGACGGACTGCATTATGATGAGGAGAGGCGCCGAAGTCACGCGGATAAAAAAGAGA
GATCTCTGAAAGAAGAGCACAGGAAAAGGGAGTCAAAGGAACCTGAAAAGGAAGACAATGGTTT
AGAGGCTACTGGGGCTGATGAGTATCTGCCCAACTTAGAAGATGATTTTGTGGATTATGAAGAC
GACTTTGAGGTTTGTGATGGAGACGATGACAGCAACAATGAGCACGAAGCTAAAGAGAAAGCCG
ACGAGCTTCCTCTGGCCCAGAAAAGGGAAATACAGGAGATTCAAAAGGCGATCAGTGCAGAGAA
CGAAAGGGTTGGCGAGTTATCTTTGAAAATGTTTCAGAAGCAAGGTCGGGCAGAGAACACGAAG
GAGCCCTGGGCAGATGCAAATGATTCCACTTCTAGAACCCCTGTTTGTGGAATTTTTGTGGATT
TTGCAACAGCTTCACATCGTCAGAAGAGTAGGAGTCAGGCCCTCAAGCAAAAGACACGAAGTAC
AAAACTGCTCCGGCTTATTGACTTAGACTTTTCCTTCACCTTTTCTCTCTTGGACCTACCACCA
GTAAATGAATATGACATGTACATTAGGAACTTTGGGAAAAAAAATACCAAGCAGGCATATGTTC
AGTATAATGAAGATAATGTTGAGAGAGACATTCAGACTGAAGATATAGAAACCAGGGAAGTATG
GACCCAACACCCAGGAGAAGGCACTGTCGTATCTGGAGGTAGCGAAGAAAAGGACTTCTCTGAT
GTCACAGTTGTACCGAAGATTGACACTCCGAGGTTGTCTAACTTTCTCCGGGCAGCATGCCAGG
TGGTTGCTGTTTTGCTTGAAGAGGACCGTTTGGCAGCTGGACCCAGCTGGATTCCCAGGGCTCA
AGACAAAGCTCTGAACATCAGTGACAGCTCCTCTCAACTGAACACAAGCCTACCGTTTCTTCAG
AGTCGGAAAGTATCCTGTTTGCATGCATCTCGAGTTCAGAGGCAGACCGTGGTCTCTGTTCATG
ACTTACCTGAAAAGGCTTTTGCTCCGTCTCTGGATAGCAGGCACCTTCTCTGTGTGTGGGATAT
TTGGCAGCCTTCAGGGCCCCAGAAGGTTCTGATATGTGAGTCAAAGGTCACTTGCTGCTGCTTT
AGCCCTTTAAAAGCATTTCTGCTGTTTGCGGGAACAGTGCATGGCTCTGTGGTTGTGTGGGACT
TAAGAGAAGACTCCAGGATACACCATTACGTGAGACTGAGCAGCTGTTTCTGGGCTTTCAGGAC
CCCAACATTCTCCACTGATGGAATCCTCACATCGGTGAACCACCGAAGCCCTCTTCAAGCCATA
GAGCCGGTTGCCACATCTGCCTACAAAAAACAGAGCTTTGTGCTTTCACCCTTTTCTACTCAAG
AAGAAATGGCAGGCTTGTCATTTCACATCGCTTCCCTGGATGAGAGTGGGGTTCTCAATGTATG
GGTGGTTGTTGAATTACCAAAAGCAGATATCTCAGGTTCAATGAGTGATTTAGGTCTGATACCT
GGAGGGAGGATCAAGTTGGTGCACAGTACTGTAATCCAACTGGGCCACAGTCTTTCTCATAAAG
ATGGTGAACTGTGGGGGTCCACACAGACACTGAGTGTCAAATTCCTGCCTTCGGATCCTAATCA
CTTCGTTGTTGGCACCGACATGGGACTTATAAGTCACAGTACCAGGCAAGATTGGAGAGTCTCT
CCCAAGGTGTTCAAACCTCAGCAACATGGTGTCAGACCAATAAAAGTTAACGTGATTGATTTTT
CACCGTTCGAAGAAACAGTATTCTTGGCTGGCTGTTCCGATGGAAGCATCAGGCTACACCAGCT
GACGTCTGAGAGGCCCATCATGCAGTGGGACAACAGCACCAGTGGCCGCTCTGTCACCAGTCTG
CAGTGGTCCCCGACAAGGCCCGCTGTGTTCCTGGTCCAGGATGATGCGTCTAGGATCTATGTTT
GGGATCTTCTTGAGAATGACCTGGGTCCTGTGGCCCAGCAGCCCATCTCTCCAGATAAGCTTGT
GGCCATGACTATCGTGGGGGAACCCGAGAAGACCAGTGGTAGCTTTGTGGCCCTGGTGTTGGCC
AGGACCTCTGGTACAGTCGACATCCAGAACCTGAAGAGGCGGTGGACCACCCCGGCAGCAGATG
AGCATAGCCAGCTGCATCTGCTTCTTCAGAAATGAAGACCTAATGTCAGGAGAATGATGGGTAC
ATGAGCCTTGATTACAGATGGATCCCTTCACTCTGTGTCTATGTGACTTTGTGTACATAGAGTG
TGTATATTCTGTACATAATTTGCTTTAGAAGAGCAGTGCTTTGGTATTCCCAGGAAATAAATCA
CTATTTTTAATGGAAACAGTGAA

hide sequence

RefSeq Acc Id:

XM_039112428 ⟹ XP_038968356

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,276,448 - 143,332,971 (-)	NCBI
mRatBN7.2	6	137,133,418 - 137,189,882 (-)	NCBI

RefSeq Acc Id:

XM_039112429 ⟹ XP_038968357

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,276,448 - 143,332,971 (-)	NCBI
mRatBN7.2	6	137,133,418 - 137,189,882 (-)	NCBI

RefSeq Acc Id:

XM_039112430 ⟹ XP_038968358

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,276,448 - 143,333,006 (-)	NCBI
mRatBN7.2	6	137,133,418 - 137,189,937 (-)	NCBI

RefSeq Acc Id:

XM_063262030 ⟹ XP_063118100

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,277,151 - 143,331,745 (-)	NCBI

RefSeq Acc Id:

XR_001838171

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	143,286,686 - 143,331,745 (-)	NCBI
mRatBN7.2	6	137,143,664 - 137,188,726 (-)	NCBI
Rnor_6.0	6	144,078,731 - 144,123,762 (-)	NCBI

Sequence:

show sequence

GCGACTTCGGCCCGTTGCTAGGAGGCAGGGACGCCGGCCCTCCCGGGACCCGCGTCGCGGCAGG
CCCTAGCAGGCTAGTCGAGCTGAGCGACGGCGGGCTTGTCTTCCTCCGGTGGCCCGCGCCTGTT
GGGCTGAAGACACGCGGCTGCCCGGGCCTCGAGGAGCGATGGAGCCTGGGAAGCTCCAGGTGCG
GTTTGTGGAGGAGTTTCTGGACTCATCCAGAGGCGTGGCTGAGTGTCAACTTAAGGAAGTCACA
GGACACCTGAAAAAAAAATGCCGAAAGAGAAGAACCAAAGATGATACTTGGAAAGCAGATGACC
TCAGAAGACACCTTAAGGCTGCACAATCAGGTAGTCCCAAGGAAGAGAAGAAACTCAGAGAAAA
GAAGATGCACAAGGACTCAGAGTTGGGCACTCCTGAATACAGAGAGCACAAGAGCAGGGACCCA
GACCGAGAGGCCCGGCACAAGGAGAAGACAGTGGAGAGAGACCTGTACAGCTCCACAGAACATC
CCCGTGGGGAACGAGACCGGGAGAGGCACAAGGAAAGGAGGAAAGATGGGAAAGACCGTGAGAA
AGACAAGCTGAAAGAGAGACATCGAGACCAAGAAGCAGAGAAGTCTCATAGTCGCGGCAAGGAC
AGAGAGAGAGAGAAAGACAGAAGGGTCAGGAAAGAAGAGCTCAGGCAGTCCATGGCCTACCATG
ACCTCCTGGGTCGAGATGTGCGTGGCCGGCAGATGCTGGAGAAAGTGGAAAAGAAAGTTCATAT
AGCAAGTAAATTACGAATGGAGGAAAGAGAAAGGAGAGACGAAGACTCTGAAAGAGTGGATGAA
GATAGAGAAAGAAGATACCGAGAACGGAAGCTGCAGTATGGTGACAGTAAGGAGAATCCCCTGA
ATTACTGGCTGTATAAGGAGGACGGTGAAAAGAAGCACAGGAAGGTGAAAGATGCAGATCGGGA
GAGGAAGCACCGAGAGAAAAGCAGCACAAGGGAGAAAAAAGACAGACACTCAAAGGAGAAGGGG
AGCTCTCTGTCTGACAGGGAAATAGAAGACAGACACAGAGAGAAGCGGCACAAGGACGGACTGC
ATTATGATGAGGAGAGGCGCCGAAGTCACGCGGATAAAAAAGAGAGATCTCTGAAAGAAGAGCA
CAGGAAAAGGGAGTCAAAGGAACCTGAAAAGGAAGACAATGGTTTAGAGGCTACTGGGGCTGAT
GAGTATCTGCCCAACTTAGAAGATGATTTTGTGGATTATGAAGACGACTTTGAGGTTTGTGATG
GAGACGATGACAGCAACAATGAGCACGAAGCTAAAGAGAAAGCCGACGAGCTTCCTCTGGCCCA
GAAAAGGGAAATACAGGAGATTCAAAAGGCGATCAGTGCAGAGAACGAAAGGGTTGGCGAGTTA
TCTTTGAAAATGTTTCAGAAGCAAGGTCGGGCAGAGAACACGAAGGAGCCCTGGGCAGATGCAA
ATGATTCCACTTCTAGAACCCCTGTTTGTGGAATTTTTGTGGATTTTGCAACAGCTTCACATCG
TCAGAAGAGTAGGAGTCAGGCCCTCAAGCAAAAGACACGAAGTACAAAACTGCTCCGGCTTATT
GACTTAGACTTTTCCTTCACCTTTTCTCTCTTGGACCTACCACCAGTAAATGAATATGACATGT
ACATTAGGAACTTTGGGAAAAAAAATACCAAGCAGGCATATGTTCAGTATAATGAAGATAATGT
TGAGAGAGACATTCAGACTGAAGATATAGAAACCAGGGAAGTATGGACCCAACACCCAGGAGAA
GGCACTGTCGTATCTGGAGGTAGCGAAGAAAAGGACTTCTCTGATGTCACAGTTGTACCGAAGA
TTGACACTCCGAGGTTGTCTAACTTTCTCCGGGCAGCATGCCAGGTGGTTGCTGTTTTGCTTGA
AGAGGACCGTTTGGCAGCTGGACCCAGCTGGATTCCCAGGGCTCAAGACAAAGCTCTGAACATC
AGTGACAGCTCCTCTCAACTGAACACAAGCCTACCGTTTCTTCAGAGTCGGAAAGTATCCTGTT
TGCATGCATCTCGAGTTCAGAGGCAGACCGTGGTCTCTGTTCATGACTTACCTGAAAAGGCTTT
TGCTCCGTCTCTGGATAGCAGGCACCTTCTCTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCC
CAGAAGGTTCTGATATGTGAGTCAAAGGTCACTTGCTGCTGCTTTAGCCCTTTAAAAGCATTTC
TGCTGTTTGCGGGAACAGTGCATGGCTCTGTGGTTGTGTGGGACTTAAGAGAAGACTCCAGGAT
ACACCATTACGTGAGACTGAGCAGCTGTTTCTGGGCTTTCAGGACCCCAACATTCTCCACTGTC
TGCTCTGTCCAGATGCGGGAGAACGAGAACACATGTCATTTGGGACTTTTCACTGCTGAGAGTT
GCAGCGGGCACTCCCTCAGCTGCTTGCTGCTGTGTTGCACACCGTGTACCTCACCAGCATTGAG
GCCACCAAGTGTTGTTAACTGGCCGTGTCAATGGAATCCTCACATCGGTGAACCACCGAAGCCC
TCTTCAAGCCATAGAGCCGGTTGCCACATCTGCCTACAAAAAACAGAGCTTTGTGCTTTCACCC
TTTTCTACTCAAGAAGAAATGGCAGGCTTGTCATTTCACATCGCTTCCCTGGATGAGAGTGGGG
TTCTCAATGTATGGGTGGTTGTTGAATTACCAAAAGCAGATATCTCAGGTTCAATGAGTGATTT
AGGTCTGATACCTGGAGGGAGGATCAAGTTGGTGCACAGTAC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001178702	(Get FASTA)	NCBI Sequence Viewer
	NP_001420922	(Get FASTA)	NCBI Sequence Viewer
	NP_001420923	(Get FASTA)	NCBI Sequence Viewer
	NP_001420924	(Get FASTA)	NCBI Sequence Viewer
	NP_001420925	(Get FASTA)	NCBI Sequence Viewer
	NP_001420926	(Get FASTA)	NCBI Sequence Viewer
	NP_001420927	(Get FASTA)	NCBI Sequence Viewer
	NP_001420928	(Get FASTA)	NCBI Sequence Viewer
	XP_006240750	(Get FASTA)	NCBI Sequence Viewer
	XP_017449682	(Get FASTA)	NCBI Sequence Viewer
	XP_017449683	(Get FASTA)	NCBI Sequence Viewer
	XP_017449684	(Get FASTA)	NCBI Sequence Viewer
	XP_017449686	(Get FASTA)	NCBI Sequence Viewer
	XP_017449687	(Get FASTA)	NCBI Sequence Viewer
	XP_038968356	(Get FASTA)	NCBI Sequence Viewer
	XP_038968357	(Get FASTA)	NCBI Sequence Viewer
	XP_038968358	(Get FASTA)	NCBI Sequence Viewer
	XP_063118100	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL89075	(Get FASTA)	NCBI Sequence Viewer
	EDL89076	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000006144
	ENSRNOP00000006144.7
	ENSRNOP00000072019
	ENSRNOP00000072019.2
	ENSRNOP00000078104
	ENSRNOP00000078104.1
	ENSRNOP00000080236
	ENSRNOP00000080236.1
	ENSRNOP00000083494
	ENSRNOP00000083494.1

RefSeq Acc Id:

NP_001178702 ⟸ NM_001191773

- UniProtKB:

A0A8I5YCM7 (UniProtKB/TrEMBL), A0A8I5ZSL7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEPGKRRTKDDTWKADDLRRHLKAAQSGSPKEEKKLREKKMHKDSELGTPEYREHKSRDPDREA
RHKEKTVERDLYSSTEHPRGERDRERHKERRKDGKDREKDKLKERHRDQEAEKSHSRGKDRERE
KDRRVRKEELRQSMAYHDLLGRDVRGRQMLEKVEKKVHIASKLRMEERERRDEDSERVDEDRER
RYRERKLQYGDSKENPLNYWLYKEDGEKKHRKVKDADRERKHREKSSTREKKDRHSKEKGSSLS
DREIEDRHREKRHKDGLHYDEERRRSHADKKERSLKEEHRKRESKEPEKEDNGLEATGADEYLP
NLEDDFVDYEDDFEVCDGDDDSNNEHEAKEKADELPLAQKREIQEIQKAISAENERVGELSLKM
FQKQGRAENTKEPWADANDSTSRTPVCGIFVDFATASHRQKSRSQALKQKTRSTKLLRLIDLDF
SFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQYNEDNVERDIQTEDIETREVWTQHPGEGTVV
SGGSEEKDFSDVTVVPKIDTPRLSNFLRAACQVVAVLLEEDRLAAGPSWIPRAQDKALNISDSS
SQLNTSLPFLQSRKVSCLHASRVQRQTVVSVHDLPEKAFAPSLDSRHLLCVWDIWQPSGPQKVL
ICESKVTCCCFSPLKAFLLFAGTVHGSVVVWDLREDSRIHHYVRLSSCFWAFRTPTFSTDGILT
SVNHRSPLQAIEPVATSAYKKQSFVLSPFSTQEEMAGLSFHIASLDESGVLNVWVVVELPKADI
SGSMSDLGLIPGGRIKLVHSTVIQLGHSLSHKDGELWGSTQTLSVKFLPSDPNHFVVGTDMGLI
SHSTRQDWRVSPKVFKPQQHGVRPIKVNVIDFSPFEETVFLAGCSDGSIRLHQLTSERPIMQWD
NSTSGRSVTSLQWSPTRPAVFLVQDDASRIYVWDLLENDLGPVAQQPISPDKLVAMTIVGEPEK
TSGSFVALVLARTSGTVDIQNLKRRWTTPAADEHSQLHLLLQK

hide sequence

RefSeq Acc Id:

XP_006240750 ⟸ XM_006240688

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEPGKLQVRFVEEFLDSSRGVAECQLKEVTGHLKKKCRKRRTKDDTWKADDLRRHLKAAQSGSP
KEEKKLREKKMHKDSELGTPEYREHKSRDPDREARHKEKTVERDLYSSTEHPRGERDRERHKER
RKDGKDREKDKLKERHRDQEAEKSHSRGKDREREKDRRVRKEELRQSMAYHDLLGRDVRGRQML
EKVEKKVHIASKLRMEERERRDEDSERVDEDRERRYRERKLQYGDSKENPLNYWLYKEDGEKKH
RKVKDADRERKHREKSSTREKKDRHSKEKGSSLSDREIEDRHREKRHKDGLHYDEERRRSHADK
KERSLKEEHRKRESKEPEKEDNGLEATGADEYLPNLEDDFVDYEDDFEVCDGDDDSNNEHEAKE
KADELPLAQKREIQEIQKAISAENERVGELSLKMFQKQGRAENTKEPWADANDSTSRTPVCGIF
VDFATASHRQKSRSQALKQKTRSTKLLRLIDLDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQA
YVQYNEDNVERDIQTEDIETREVWTQHPGEGTVVSGGSEEKDFSDVTVVPKIDTPRLSNFLRAA
CQVVAVLLEEDRLAAGPSWIPRAQDKALNISDSSSQLNTSLPFLQSRKVSCLHASRVQRQTVVS
VHDLPEKAFAPSLDSRHLLCVWDIWQPSGPQKVLICESKVTCCCFSPLKAFLLFAGTVHGSVVV
WDLREDSRIHHYVRLSSCFWAFRTPTFSTDGILTSVNHRSPLQAIEPVATSAYKKQSFVLSPFS
TQEEMAGLSFHIASLDESGVLNVWVVVELPKADISGSMSDLGLIPGGRIKLVHSTVIQLGHSLS
HKDGELWGSTQTLSVKFLPSDPNHFVVGTDMGLISHSTRQDWRVSPKVFKPQQHGVRPIKVNVI
DFSPFEETVFLAGCSDGSIRLHQLTSERPIMQWDNSTSGRSVTSLQWSPTRPAVFLVQDDASRI
YVWDLLENDLGPVAQQPISPDKLVAMTIVGEPEKTSGSFVALVLARTSGTVDIQNLKRRWTTPA
ADEHSQLHLLLQK

hide sequence

RefSeq Acc Id:

XP_017449687 ⟸ XM_017594198

- Peptide Label:

isoform X7

- Sequence:

show sequence

MHKDSELGTPEYREHKSRDPDREARHKEKTVERDLYSSTEHPRGERDRERHKERRKDGKDREKD
KLKERHRDQEAEKSHSRGKDREREKDRRVRKEELRQSMAYHDLLGRDVRGRQMLEKVEKKVHIA
SKLRMEERERRDEDSERVDEDRERRYRERKLQYGDSKENPLNYWLYKEDGEKKHRKVKDADRER
KHREKSSTREKKDRHSKEKGSSLSDREIEDRHREKRHKDGLHYDEERRRSHADKKERSLKEEHR
KRESKEPEKEDNGLEATGADEYLPNLEDDFVDYEDDFEVCDGDDDSNNEHEAKEKADELPLAQK
REIQEIQKAISAENERVGELSLKMFQKQGRAENTKEPWADANDSTSRTPVCGIFVDFATASHRQ
KSRSQALKQKTRSTKLLRLIDLDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQYNEDNVE
RDIQTEDIETREVWTQHPGEGTVVSGGSEEKDFSDVTVVPKIDTPRLSNFLRAACQVVAVLLEE
DRLAAGPSWIPRAQDKALNISDSSSQLNTSLPFLQSRKVSCLHASRVQRQTVVSVHDLPEKAFA
PSLDSRHLLCVWDIWQPSGPQKVLICESKVTCCCFSPLKAFLLFAGTVHGSVVVWDLREDSRIH
HYVRLSSCFWAFRTPTFSTDGILTSVNHRSPLQAIEPVATSAYKKQSFVLSPFSTQEEMAGLSF
HIASLDESGVLNVWVVVELPKADISGSMSDLGLIPGGRIKLVHSTVIQLGHSLSHKDGELWGST
QTLSVKFLPSDPNHFVVGTDMGLISHSTRQDWRVSPKVFKPQQHGVRPIKVNVIDFSPFEETVF
LAGCSDGSIRLHQLTSERPIMQWDNSTSGRSVTSLQWSPTRPAVFLVQDDASRIYVWDLLENDL
GPVAQQPISPDKLVAMTIVGEPEKTSGSFVALVLARTSGTVDIQNLKRRWTTPAADEHSQLHLL
LQK

hide sequence

RefSeq Acc Id:

XP_017449684 ⟸ XM_017594195

- Peptide Label:

isoform X6

- Sequence:

show sequence

MEPGKAAQSGSPKEEKKLREKKMHKDSELGTPEYREHKSRDPDREARHKEKTVERDLYSSTEHP
RGERDRERHKERRKDGKDREKDKLKERHRDQEAEKSHSRGKDREREKDRRVRKEELRQSMAYHD
LLGRDVRGRQMLEKVEKKVHIASKLRMEERERRDEDSERVDEDRERRYRERKLQYGDSKENPLN
YWLYKEDGEKKHRKVKDADRERKHREKSSTREKKDRHSKEKGSSLSDREIEDRHREKRHKDGLH
YDEERRRSHADKKERSLKEEHRKRESKEPEKEDNGLEATGADEYLPNLEDDFVDYEDDFEVCDG
DDDSNNEHEAKEKADELPLAQKREIQEIQKAISAENERVGELSLKMFQKQGRAENTKEPWADAN
DSTSRTPVCGIFVDFATASHRQKSRSQALKQKTRSTKLLRLIDLDFSFTFSLLDLPPVNEYDMY
IRNFGKKNTKQAYVQYNEDNVERDIQTEDIETREVWTQHPGEGTVVSGGSEEKDFSDVTVVPKI
DTPRLSNFLRAACQVVAVLLEEDRLAAGPSWIPRAQDKALNISDSSSQLNTSLPFLQSRKVSCL
HASRVQRQTVVSVHDLPEKAFAPSLDSRHLLCVWDIWQPSGPQKVLICESKVTCCCFSPLKAFL
LFAGTVHGSVVVWDLREDSRIHHYVRLSSCFWAFRTPTFSTDGILTSVNHRSPLQAIEPVATSA
YKKQSFVLSPFSTQEEMAGLSFHIASLDESGVLNVWVVVELPKADISGSMSDLGLIPGGRIKLV
HSTVIQLGHSLSHKDGELWGSTQTLSVKFLPSDPNHFVVGTDMGLISHSTRQDWRVSPKVFKPQ
QHGVRPIKVNVIDFSPFEETVFLAGCSDGSIRLHQLTSERPIMQWDNSTSGRSVTSLQWSPTRP
AVFLVQDDASRIYVWDLLENDLGPVAQQPISPDKLVAMTIVGEPEKTSGSFVALVLARTSGTVD
IQNLKRRWTTPAADEHSQLHLLLQK

hide sequence

RefSeq Acc Id:	XP_017449682 ⟸ XM_017594193
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZSL7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEPGKLQVRFVEEFLDSSRGVAECQLKEVTGHLKKKCRKAAQSGSPKEEKKLREKKMHKDSELG TPEYREHKSRDPDREARHKEKTVERDLYSSTEHPRGERDRERHKERRKDGKDREKDKLKERHRD QEAEKSHSRGKDREREKDRRVRKEELRQSMAYHDLLGRDVRGRQMLEKVEKKVHIASKLRMEER ERRDEDSERVDEDRERRYRERKLQYGDSKENPLNYWLYKEDGEKKHRKVKDADRERKHREKSST REKKDRHSKEKGSSLSDREIEDRHREKRHKDGLHYDEERRRSHADKKERSLKEEHRKRESKEPE KEDNGLEATGADEYLPNLEDDFVDYEDDFEVCDGDDDSNNEHEAKEKADELPLAQKREIQEIQK AISAENERVGELSLKMFQKQGRAENTKEPWADANDSTSRTPVCGIFVDFATASHRQKSRSQALK QKTRSTKLLRLIDLDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQYNEDNVERDIQTEDI ETREVWTQHPGEGTVVSGGSEEKDFSDVTVVPKIDTPRLSNFLRAACQVVAVLLEEDRLAAGPS WIPRAQDKALNISDSSSQLNTSLPFLQSRKVSCLHASRVQRQTVVSVHDLPEKAFAPSLDSRHL LCVWDIWQPSGPQKVLICESKVTCCCFSPLKAFLLFAGTVHGSVVVWDLREDSRIHHYVRLSSC FWAFRTPTFSTDGILTSVNHRSPLQAIEPVATSAYKKQSFVLSPFSTQEEMAGLSFHIASLDES GVLNVWVVVELPKADISGSMSDLGLIPGGRIKLVHSTVIQLGHSLSHKDGELWGSTQTLSVKFL PSDPNHFVVGTDMGLISHSTRQDWRVSPKVFKPQQHGVRPIKVNVIDFSPFEETVFLAGCSDGS IRLHQLTSERPIMQWDNSTSGRSVTSLQWSPTRPAVFLVQDDASRIYVWDLLENDLGPVAQQPI SPDKLVAMTIVGEPEKTSGSFVALVLARTSGTVDIQNLKRRWTTPAADEHSQLHLLLQK hide sequence

RefSeq Acc Id:

XP_017449686 ⟸ XM_017594197

- Peptide Label:

isoform X7

- Sequence:

show sequence

MHKDSELGTPEYREHKSRDPDREARHKEKTVERDLYSSTEHPRGERDRERHKERRKDGKDREKD
KLKERHRDQEAEKSHSRGKDREREKDRRVRKEELRQSMAYHDLLGRDVRGRQMLEKVEKKVHIA
SKLRMEERERRDEDSERVDEDRERRYRERKLQYGDSKENPLNYWLYKEDGEKKHRKVKDADRER
KHREKSSTREKKDRHSKEKGSSLSDREIEDRHREKRHKDGLHYDEERRRSHADKKERSLKEEHR
KRESKEPEKEDNGLEATGADEYLPNLEDDFVDYEDDFEVCDGDDDSNNEHEAKEKADELPLAQK
REIQEIQKAISAENERVGELSLKMFQKQGRAENTKEPWADANDSTSRTPVCGIFVDFATASHRQ
KSRSQALKQKTRSTKLLRLIDLDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQYNEDNVE
RDIQTEDIETREVWTQHPGEGTVVSGGSEEKDFSDVTVVPKIDTPRLSNFLRAACQVVAVLLEE
DRLAAGPSWIPRAQDKALNISDSSSQLNTSLPFLQSRKVSCLHASRVQRQTVVSVHDLPEKAFA
PSLDSRHLLCVWDIWQPSGPQKVLICESKVTCCCFSPLKAFLLFAGTVHGSVVVWDLREDSRIH
HYVRLSSCFWAFRTPTFSTDGILTSVNHRSPLQAIEPVATSAYKKQSFVLSPFSTQEEMAGLSF
HIASLDESGVLNVWVVVELPKADISGSMSDLGLIPGGRIKLVHSTVIQLGHSLSHKDGELWGST
QTLSVKFLPSDPNHFVVGTDMGLISHSTRQDWRVSPKVFKPQQHGVRPIKVNVIDFSPFEETVF
LAGCSDGSIRLHQLTSERPIMQWDNSTSGRSVTSLQWSPTRPAVFLVQDDASRIYVWDLLENDL
GPVAQQPISPDKLVAMTIVGEPEKTSGSFVALVLARTSGTVDIQNLKRRWTTPAADEHSQLHLL
LQK

hide sequence

RefSeq Acc Id:	XP_017449683 ⟸ XM_017594194
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K1X3 (UniProtKB/TrEMBL), A0A8I5ZSL7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLFKRRTKDDTWKADDLRRHLKAAQSGSPKEEKKLREKKMHKDSELGTPEYREHKSRDPDREA RHKEKTVERDLYSSTEHPRGERDRERHKERRKDGKDREKDKLKERHRDQEAEKSHSRGKDRERE KDRRVRKEELRQSMAYHDLLGRDVRGRQMLEKVEKKVHIASKLRMEERERRDEDSERVDEDRER RYRERKLQYGDSKENPLNYWLYKEDGEKKHRKVKDADRERKHREKSSTREKKDRHSKEKGSSLS DREIEDRHREKRHKDGLHYDEERRRSHADKKERSLKEEHRKRESKEPEKEDNGLEATGADEYLP NLEDDFVDYEDDFEVCDGDDDSNNEHEAKEKADELPLAQKREIQEIQKAISAENERVGELSLKM FQKQGRAENTKEPWADANDSTSRTPVCGIFVDFATASHRQKSRSQALKQKTRSTKLLRLIDLDF SFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQYNEDNVERDIQTEDIETREVWTQHPGEGTVV SGGSEEKDFSDVTVVPKIDTPRLSNFLRAACQVVAVLLEEDRLAAGPSWIPRAQDKALNISDSS SQLNTSLPFLQSRKVSCLHASRVQRQTVVSVHDLPEKAFAPSLDSRHLLCVWDIWQPSGPQKVL ICESKVTCCCFSPLKAFLLFAGTVHGSVVVWDLREDSRIHHYVRLSSCFWAFRTPTFSTDGILT SVNHRSPLQAIEPVATSAYKKQSFVLSPFSTQEEMAGLSFHIASLDESGVLNVWVVVELPKADI SGSMSDLGLIPGGRIKLVHSTVIQLGHSLSHKDGELWGSTQTLSVKFLPSDPNHFVVGTDMGLI SHSTRQDWRVSPKVFKPQQHGVRPIKVNVIDFSPFEETVFLAGCSDGSIRLHQLTSERPIMQWD NSTSGRSVTSLQWSPTRPAVFLVQDDASRIYVWDLLENDLGPVAQQPISPDKLVAMTIVGEPEK TSGSFVALVLARTSGTVDIQNLKRRWTTPAADEHSQLHLLLQK hide sequence

Ensembl Acc Id:

ENSRNOP00000006144 ⟸ ENSRNOT00000006144

Ensembl Acc Id:

ENSRNOP00000072019 ⟸ ENSRNOT00000087845

RefSeq Acc Id:	XP_038968358 ⟸ XM_039112430
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZSL7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038968357 ⟸ XM_039112429
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038968356 ⟸ XM_039112428
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K1X3 (UniProtKB/TrEMBL), A0A8I5ZSL7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000078104 ⟸ ENSRNOT00000099487

Ensembl Acc Id:

ENSRNOP00000083494 ⟸ ENSRNOT00000109958

Ensembl Acc Id:

ENSRNOP00000080236 ⟸ ENSRNOT00000093919

RefSeq Acc Id:	XP_063118100 ⟸ XM_063262030
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZSL7 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K1X3-F1-model_v2	AlphaFold	A0A0G2K1X3	1-1037	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694908

Promoter ID:

EPDNEW_R5431

Type:

initiation region

Name:

Wdr60_1

Description:

WD repeat domain 60

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	144,123,746 - 144,123,806	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306493	AgrOrtholog
BioCyc Gene	G2FUF-35514	BioCyc
Ensembl Genes	ENSRNOG00000004520	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000006144	ENTREZGENE
	ENSRNOT00000006144.7	UniProtKB/TrEMBL
	ENSRNOT00000087845	ENTREZGENE
	ENSRNOT00000087845.2	UniProtKB/TrEMBL
	ENSRNOT00000093919	ENTREZGENE
	ENSRNOT00000093919.1	UniProtKB/TrEMBL
	ENSRNOT00000099487	ENTREZGENE
	ENSRNOT00000099487.1	UniProtKB/TrEMBL
	ENSRNOT00000109958	ENTREZGENE
	ENSRNOT00000109958.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
InterPro	WD40/YVTN_repeat-like_dom	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
	WDR60	UniProtKB/TrEMBL
KEGG Report	rno:314523	UniProtKB/TrEMBL
NCBI Gene	314523	ENTREZGENE
PANTHER	CYTOPLASMIC DYNEIN 2 INTERMEDIATE CHAIN 1	UniProtKB/TrEMBL
	PTHR16022	UniProtKB/TrEMBL
Pfam	WD40	UniProtKB/TrEMBL
PhenoGen	Dync2i1	PhenoGen
RatGTEx	ENSRNOG00000004520	RatGTEx
SMART	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	WD40_like	UniProtKB/TrEMBL
UniProt	A0A0G2K1X3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5YCM7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZSL7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZWP7	ENTREZGENE, UniProtKB/TrEMBL
	D3ZYV1_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-05-22	Dync2i1	dynein 2 intermediate chain 1	Wdr60	WD repeat domain 60	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Wdr60	WD repeat domain 60	RGD1306493_predicted	similar to hypothetical protein FLJ10300 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1306493_predicted	similar to hypothetical protein FLJ10300 (predicted)	LOC314523_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC314523_predicted	similar to hypothetical protein FLJ10300 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM