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Gene: Arid3b (AT-rich interaction domain 3B) Rattus norvegicus
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Symbol: Arid3b
Name: AT-rich interaction domain 3B
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II distal enhancer sequence-specific DNA binding activity; and RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to the nucleoplasm. Orthologous to human ARID3B (AT-rich interaction domain 3B); INTERACTS WITH 4-amino-2,6-dinitrotoluene; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AT rich interactive domain 3B (Bright like); AT-rich interactive domain-containing protein 3B; LOC367092
Orthologs:
Homo sapiens (human) : ARID3B (AT-rich interaction domain 3B)  HGNC  Alliance
Mus musculus (house mouse) : Arid3b (AT rich interactive domain 3B (BRIGHT-like))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Arid3b (AT-rich interaction domain 3B)
Pan paniscus (bonobo/pygmy chimpanzee) : ARID3B (AT-rich interaction domain 3B)
Canis lupus familiaris (dog) : ARID3B (AT-rich interaction domain 3B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arid3b (AT-rich interaction domain 3B)
Sus scrofa (pig) : ARID3B (AT-rich interaction domain 3B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0862,569,601 - 62,616,837 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0862,346,404 - 62,393,637 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4861,560,831 - 61,606,146 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1861,581,882 - 61,625,123 (-)NCBI
Celera857,659,216 - 57,704,045 (-)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Arid3b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306335
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.