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Gene: Pcdh20 (protocadherin 20) Rattus norvegicus
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Symbol: Pcdh20
Name: protocadherin 20
Description: Predicted to have calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to localize to the integral component of plasma membrane. Orthologous to human PCDH20 (protocadherin 20); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; diuron.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC306081; protocadherin-20
Orthologs:
Homo sapiens (human) : PCDH20 (protocadherin 20)  HGNC  Alliance
Mus musculus (house mouse) : Pcdh20 (protocadherin 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pcdh20 (protocadherin 20)
Pan paniscus (bonobo/pygmy chimpanzee) : PCDH20 (protocadherin 20)
Canis lupus familiaris (dog) : PCDH20 (protocadherin 20)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pcdh20 (protocadherin 20)
Sus scrofa (pig) : PCDH20 (protocadherin 20)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01571,772,777 - 71,779,033 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01575,353,079 - 75,359,335 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41570,760,564 - 70,766,820 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11570,777,005 - 70,782,599 (-)NCBI
Celera1563,904,183 - 63,910,439 (-)NCBICelera
Cytogenetic Map15q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pcdh20
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306297
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.