Acad11 (acyl-CoA dehydrogenase family, member 11) - Rat Genome Database

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Gene: Acad11 (acyl-CoA dehydrogenase family, member 11) Rattus norvegicus
Analyze
Symbol: Acad11
Name: acyl-CoA dehydrogenase family, member 11
RGD ID: 1306270
Description: Predicted to enable long-chain fatty acyl-CoA dehydrogenase activity; medium-chain fatty acyl-CoA dehydrogenase activity; and very-long-chain fatty acyl-CoA dehydrogenase activity. Predicted to be involved in fatty acid beta-oxidation using acyl-CoA dehydrogenase. Located in peroxisome. Orthologous to human ACAD11 (acyl-CoA dehydrogenase family member 11); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: ACAD-11; acyl-CoA dehydrogenase family member 11; acyl-Coenzyme A dehydrogenase family, member 11; LOC315973; RGD1306270; similar to 5730439E10Rik protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88113,560,142 - 113,625,346 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8113,560,196 - 113,625,352 (+)EnsemblGRCr8
mRatBN7.28104,681,346 - 104,746,559 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8104,681,396 - 104,746,560 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8110,328,511 - 110,393,633 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08108,527,704 - 108,592,826 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08106,370,404 - 106,435,529 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08112,594,758 - 112,676,275 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8112,594,691 - 112,676,280 (+)Ensemblrn6Rnor6.0
Rnor_5.08111,982,421 - 112,062,751 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48109,124,763 - 109,190,186 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8104,045,620 - 104,111,515 (+)NCBICelera
RGSC_v3.18109,144,288 - 109,209,371 (+)NCBI
Cytogenetic Map8q32NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
1,1-dichloroethene  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrolein  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
amitrole  (EXP)
antirheumatic drug  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
chenodeoxycholic acid  (ISO)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
dichloroacetic acid  (ISO)
dioxygen  (ISO)
disulfiram  (ISO)
diuron  (EXP)
endosulfan  (EXP)
entinostat  (ISO)
ethanol  (ISO)
genistein  (EXP)
gentamycin  (EXP)
glafenine  (EXP)
gold atom  (ISO)
gold(0)  (ISO)
ivermectin  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methapyrilene  (EXP)
methimazole  (EXP)
microcystin-LR  (ISO)
nefazodone  (EXP)
okadaic acid  (ISO)
ozone  (ISO)
p-chloromercuribenzoic acid  (ISO)
p-toluidine  (EXP)
panobinostat  (ISO)
paracetamol  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
pirinixic acid  (ISO)
potassium dichromate  (ISO)
quercetin  (ISO)
quinolin-8-ol  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
sodium arsenite  (ISO)
Soman  (EXP)
sulfadimethoxine  (EXP)
tetrachloromethane  (EXP,ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
triptonide  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IEA)
membrane  (IEA)
mitochondrial membrane  (IEA,ISO)
mitochondrion  (IBA,IEA)
nucleus  (IEA,ISO)
peroxisome  (IDA,IEA)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease. Kikuchi M, etal., J Biol Chem. 2004 Jan 2;279(1):421-8. Epub 2003 Oct 15.
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:18614015   PMID:21237683   PMID:30764676  


Genomics

Comparative Map Data
Acad11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88113,560,142 - 113,625,346 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8113,560,196 - 113,625,352 (+)EnsemblGRCr8
mRatBN7.28104,681,346 - 104,746,559 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8104,681,396 - 104,746,560 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8110,328,511 - 110,393,633 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08108,527,704 - 108,592,826 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08106,370,404 - 106,435,529 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08112,594,758 - 112,676,275 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8112,594,691 - 112,676,280 (+)Ensemblrn6Rnor6.0
Rnor_5.08111,982,421 - 112,062,751 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48109,124,763 - 109,190,186 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8104,045,620 - 104,111,515 (+)NCBICelera
RGSC_v3.18109,144,288 - 109,209,371 (+)NCBI
Cytogenetic Map8q32NCBI
ACAD11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383132,558,141 - 132,659,809 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3132,558,138 - 132,660,082 (-)Ensemblhg38GRCh38
GRCh373132,276,985 - 132,378,653 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363133,759,672 - 133,861,665 (-)NCBIBuild 36Build 36hg18NCBI36
Celera3130,703,259 - 130,804,468 (-)NCBICelera
Cytogenetic Map3q22.1NCBI
HuRef3129,656,407 - 129,758,621 (-)NCBIHuRef
CHM1_13132,239,976 - 132,341,990 (-)NCBICHM1_1
T2T-CHM13v2.03135,302,651 - 135,404,302 (-)NCBIT2T-CHM13v2.0
Acad11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399103,940,923 - 104,004,855 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9103,940,576 - 104,004,924 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm389104,063,724 - 104,127,656 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9104,063,377 - 104,127,725 (+)Ensemblmm10GRCm38
MGSCv379103,966,033 - 104,029,976 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv369103,922,048 - 103,985,991 (+)NCBIMGSCv36mm8
Celera9103,616,515 - 103,680,741 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map956.25NCBI
Acad11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555015,871,113 - 5,952,909 (+)Ensembl
ChiLan1.0NW_0049555015,871,328 - 5,952,786 (+)NCBIChiLan1.0ChiLan1.0
ACAD11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22130,508,569 - 130,610,914 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13130,513,294 - 130,615,237 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03129,631,105 - 129,732,894 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13137,107,834 - 137,209,550 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3137,107,834 - 137,209,550 (-)EnsemblpanPan2panpan1.1
ACAD11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12329,537,049 - 29,645,338 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2329,538,555 - 29,645,176 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2329,511,533 - 29,620,447 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02330,051,623 - 30,159,455 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2330,050,335 - 30,159,135 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12329,747,036 - 29,855,437 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02329,804,592 - 29,912,565 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02330,051,803 - 30,160,280 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Acad11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560269,155,127 - 69,236,773 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365295,914,539 - 5,996,902 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365295,915,241 - 5,997,230 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACAD11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1373,733,524 - 73,831,444 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11373,733,508 - 73,831,496 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21381,305,201 - 81,403,413 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACAD11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11557,632,139 - 57,706,468 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1557,626,742 - 57,707,504 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604130,601,367 - 30,694,674 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Acad11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247308,704,350 - 8,792,741 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247308,704,458 - 8,792,678 (-)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Acad11
434 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:507
Count of miRNA genes:262
Interacting mature miRNAs:310
Transcripts:ENSRNOT00000038383
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)8105462581132782436Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)882352698127352698Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)861019838121662124Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)849849908118871671Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)880768445125768445Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)880768445125768445Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)870041301121080908Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)868690349119799881Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)884192326129192326Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)8102413464132782436Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8103375781129871912Rat
8693654Alc32Alcohol consumption QTL 3220.755drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)897492344116428905Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)855428333127966348Rat
2316950Scl66Serum cholesterol level QTL 664.1blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)839106363114525825Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
631217Activ1Activity QTL 115.9voluntary movement trait (VT:0003491)number of photobeam interruptions in an experimental apparatus (CMO:0001517)8111249511117802327Rat
2313400Anxrr25Anxiety related response QTL 25aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)898145073122898010Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)880768445125768445Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)880768445125768445Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)891340911131690273Rat

Markers in Region
BQ205714  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28104,719,597 - 104,719,785 (+)MAPPERmRatBN7.2
Rnor_6.08112,646,962 - 112,647,149NCBIRnor6.0
Rnor_5.08112,034,122 - 112,034,309UniSTSRnor5.0
RGSC_v3.48109,163,282 - 109,163,469UniSTSRGSC3.4
Celera8104,084,459 - 104,084,646UniSTS
RH 3.4 Map81157.0UniSTS
Cytogenetic Map8q32UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 91 59 6 355 191 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000038383   ⟹   ENSRNOP00000036574
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8113,560,196 - 113,625,352 (+)Ensembl
mRatBN7.2 Ensembl8104,681,396 - 104,746,560 (+)Ensembl
Rnor_6.0 Ensembl8112,594,691 - 112,676,280 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000081281   ⟹   ENSRNOP00000072442
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8113,560,196 - 113,604,836 (+)Ensembl
mRatBN7.2 Ensembl8104,681,396 - 104,726,046 (+)Ensembl
Rnor_6.0 Ensembl8112,594,829 - 112,675,234 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097837   ⟹   ENSRNOP00000080596
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8113,560,196 - 113,625,352 (+)Ensembl
mRatBN7.2 Ensembl8104,681,396 - 104,746,560 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000118388   ⟹   ENSRNOP00000095487
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8113,560,196 - 113,625,352 (+)Ensembl
mRatBN7.2 Ensembl8104,681,396 - 104,746,560 (+)Ensembl
RefSeq Acc Id: NM_001108181   ⟹   NP_001101651
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88113,560,212 - 113,625,346 (+)NCBI
mRatBN7.28104,681,416 - 104,746,559 (+)NCBI
Rnor_6.08112,594,758 - 112,676,275 (+)NCBI
Rnor_5.08111,982,421 - 112,062,751 (+)NCBI
RGSC_v3.48109,124,763 - 109,190,186 (+)RGD
Celera8104,045,620 - 104,111,515 (+)RGD
Sequence:
RefSeq Acc Id: XM_039081558   ⟹   XP_038937486
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88113,560,142 - 113,600,101 (+)NCBI
mRatBN7.28104,681,346 - 104,721,316 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001101651 (Get FASTA)   NCBI Sequence Viewer  
  XP_038937486 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI67762 (Get FASTA)   NCBI Sequence Viewer  
  B3DMA2 (Get FASTA)   NCBI Sequence Viewer  
  EDL77362 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000036574
  ENSRNOP00000036574.4
  ENSRNOP00000072442
RefSeq Acc Id: NP_001101651   ⟸   NM_001108181
- UniProtKB: B3DMA2 (UniProtKB/Swiss-Prot),   A0A8I5ZR07 (UniProtKB/TrEMBL),   A0A8I6AMR1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000036574   ⟸   ENSRNOT00000038383
Ensembl Acc Id: ENSRNOP00000072442   ⟸   ENSRNOT00000081281
RefSeq Acc Id: XP_038937486   ⟸   XM_039081558
- Peptide Label: isoform X1
- UniProtKB: A0A8L2R5W9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000080596   ⟸   ENSRNOT00000097837
Ensembl Acc Id: ENSRNOP00000095487   ⟸   ENSRNOT00000118388
Protein Domains
Acyl-CoA dehydrogenase/oxidase C-terminal   Acyl-CoA dehydrogenase/oxidase N-terminal   Acyl-CoA oxidase/dehydrogenase middle   Aminoglycoside phosphotransferase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B3DMA2-F1-model_v2 AlphaFold B3DMA2 1-779 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696235
Promoter ID:EPDNEW_R6760
Type:initiation region
Name:Acad11_1
Description:acyl-CoA dehydrogenase family, member 11
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.08112,594,780 - 112,594,840EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306270 AgrOrtholog
BioCyc Gene G2FUF-29296 BioCyc
Ensembl Genes ENSRNOG00000010940 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000038383 ENTREZGENE
  ENSRNOT00000038383.6 UniProtKB/Swiss-Prot
  ENSRNOT00000081281 ENTREZGENE
Gene3D-CATH 1.10.540.10 UniProtKB/Swiss-Prot
  2.40.110.10 UniProtKB/Swiss-Prot
  3.90.1200.10 UniProtKB/Swiss-Prot
  Butyryl-CoA Dehydrogenase, subunit A, domain 3 UniProtKB/Swiss-Prot
  Phosphorylase Kinase, domain 1 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7443858 IMAGE-MGC_LOAD
InterPro ACAD10_11_N UniProtKB/Swiss-Prot
  Acyl-CoA_dehydrogenase UniProtKB/Swiss-Prot
  Acyl-CoA_Oxase/DH_cen-dom UniProtKB/Swiss-Prot
  Acyl-CoA_Oxase/DH_mid-dom_sf UniProtKB/Swiss-Prot
  AcylCo_DH-like_C UniProtKB/Swiss-Prot
  AcylCo_DH/oxidase_C UniProtKB/Swiss-Prot
  AcylCoA_DH/ox_N UniProtKB/Swiss-Prot
  AcylCoA_DH/ox_N_sf UniProtKB/Swiss-Prot
  AcylCoA_DH/oxidase_NM_dom UniProtKB/Swiss-Prot
  Aminoglycoside_PTrfase UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:315973 UniProtKB/Swiss-Prot
MGC_CLONE MGC:187508 IMAGE-MGC_LOAD
NCBI Gene 315973 ENTREZGENE
PANTHER ACYL-COA DEHYDROGENASE FAMILY MEMBER 11 UniProtKB/Swiss-Prot
  MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED UniProtKB/Swiss-Prot
Pfam Acyl-CoA_dh_1 UniProtKB/Swiss-Prot
  Acyl-CoA_dh_M UniProtKB/Swiss-Prot
  Acyl-CoA_dh_N UniProtKB/Swiss-Prot
  APH UniProtKB/Swiss-Prot
PhenoGen Acad11 PhenoGen
RatGTEx ENSRNOG00000010940 RatGTEx
Superfamily-SCOP SSF47203 UniProtKB/Swiss-Prot
  SSF56112 UniProtKB/Swiss-Prot
  SSF56645 UniProtKB/Swiss-Prot
UniProt A0A8I5ZR07 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AMR1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2R5W9 ENTREZGENE, UniProtKB/TrEMBL
  ACD11_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-28 Acad11  acyl-CoA dehydrogenase family, member 11  Acad11  acyl-Coenzyme A dehydrogenase family, member 11  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Acad11  acyl-Coenzyme A dehydrogenase family, member 11   Acad11_predicted  acyl-Coenzyme A dehydrogenase family, member 11 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Acad11_predicted  acyl-Coenzyme A dehydrogenase family, member 11 (predicted)  RGD1306270_predicted  similar to 5730439E10Rik protein (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1306270_predicted  similar to 5730439E10Rik protein (predicted)  LOC315973_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC315973_predicted  similar to 5730439E10Rik protein (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL