Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Atp10a (ATPase phospholipid transporting 10A (putative)) Rattus norvegicus
Analyze
Symbol: Atp10a
Name: ATPase phospholipid transporting 10A (putative)
Description: Predicted to have ATPase-coupled intramembrane lipid transporter activity. Predicted to be involved in phospholipid translocation. Predicted to localize to the endoplasmic reticulum and plasma membrane. Orthologous to human ATP10A (ATPase phospholipid transporting 10A (putative)); INTERACTS WITH 1-naphthyl isothiocyanate; 6-propyl-2-thiouracil; aflatoxin B1.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATPase, class V, type 10A; LOC365266; probable phospholipid-transporting ATPase VA
Orthologs:
Homo sapiens (human) : ATP10A (ATPase phospholipid transporting 10A (putative))  HGNC  Alliance
Mus musculus (house mouse) : Atp10a (ATPase, class V, type 10A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp10a (ATPase phospholipid transporting 10A (putative))
Pan paniscus (bonobo/pygmy chimpanzee) : ATP10A (ATPase phospholipid transporting 10A (putative))
Canis lupus familiaris (dog) : ATP10A (ATPase phospholipid transporting 10A (putative))
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp10a (ATPase phospholipid transporting 10A (putative))
Sus scrofa (pig) : ATP10A (ATPase phospholipid transporting 10A (putative))
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01115,973,343 - 116,141,892 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01117,144,423 - 117,311,749 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41110,175,554 - 110,360,215 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11110,266,151 - 110,438,558 (+)NCBI
Celera1103,705,305 - 103,873,921 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atp10a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306150
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-06-18
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.