Smarcal1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 9 | 81,689,446 - 81,735,406 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 9 | 74,239,718 - 74,286,156 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 9 | 74,240,241 - 74,286,146 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 9 | 82,695,787 - 82,741,329 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 9 | 87,824,678 - 87,870,214 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 9 | 86,211,255 - 86,256,747 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 9 | 79,943,775 - 79,990,230 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 9 | 79,944,132 - 79,990,229 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 9 | 79,716,012 - 79,762,216 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 9 | 71,780,870 - 71,827,780 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 9 | 71,930,360 - 71,974,752 (+) | NCBI | | | | | Celera | 9 | 71,834,400 - 71,880,797 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | q33 | NCBI | | | | |
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SMARCAL1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 2 | 216,412,484 - 216,483,053 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 216,412,383 - 216,483,053 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 217,277,207 - 217,347,776 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 216,986,820 - 217,056,021 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 217,104,083 - 217,173,278 | NCBI | | | | | Celera | 2 | 211,045,111 - 211,115,648 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q35 | NCBI | | | | | HuRef | 2 | 209,131,595 - 209,202,094 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 217,282,680 - 217,353,309 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 216,894,907 - 216,965,465 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Smarcal1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 72,575,593 - 72,675,949 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 72,622,410 - 72,672,293 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 72,536,695 - 72,636,790 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 72,583,251 - 72,633,134 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 72,629,825 - 72,683,364 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 72,516,478 - 72,566,341 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 73,151,284 - 73,205,338 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | C3 | NCBI | | | | | cM Map | 1 | 36.72 | NCBI | | | | |
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Smarcal1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955453 | 16,719,931 - 16,784,709 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955453 | 16,724,286 - 16,784,129 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SMARCAL1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 13 | 119,040,341 - 119,111,253 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2B | 119,055,327 - 119,126,253 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2B | 103,672,934 - 103,743,802 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2B | 222,276,294 - 222,347,258 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2B | 222,276,353 - 222,347,258 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SMARCAL1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 37 | 23,364,941 - 23,425,206 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 37 | 23,367,220 - 23,419,248 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 37 | 24,193,550 - 24,253,982 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 37 | 23,392,255 - 23,452,837 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 37 | 23,392,945 - 23,447,926 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 37 | 23,277,174 - 23,331,540 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 37 | 23,229,412 - 23,289,770 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 37 | 23,247,796 - 23,308,267 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Smarcal1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SMARCAL1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 15 | 118,627,467 - 118,688,397 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 15 | 118,627,734 - 118,688,005 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 15 | 131,503,125 - 131,506,635 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SMARCAL1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 10 | 102,253,187 - 102,319,356 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 10 | 102,255,453 - 102,319,330 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 97,083,733 - 97,149,570 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Smarcal1 (Heterocephalus glaber - naked mole-rat) |
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