Slc24a4 (solute carrier family 24 member 4) - Rat Genome Database

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Gene: Slc24a4 (solute carrier family 24 member 4) Rattus norvegicus
Analyze
Symbol: Slc24a4
Name: solute carrier family 24 member 4
RGD ID: 1305926
Description: Predicted to enable calcium ion transmembrane transporter activity; calcium-dependent protein binding activity; and calmodulin binding activity. Predicted to be involved in several processes, including cellular response to high light intensity; cone photoresponse recovery; and inorganic cation transmembrane transport. Predicted to act upstream of or within positive regulation of gene expression. Located in plasma membrane. Human ortholog(s) of this gene implicated in amelogenesis imperfecta hypomaturation type 2A5. Orthologous to human SLC24A4 (solute carrier family 24 member 4); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC314396; Nckx4; sodium/potassium/calcium exchanger 4; solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: Slc24a4Tn(sb-T2/Bart3)2.145Mcwi  
Genetic Models: F344-Slc24a4Tn(sb-T2/Bart3)2.145Mcwi
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26121,278,746 - 121,419,811 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6121,280,031 - 121,414,949 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6121,421,469 - 121,560,529 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.06121,716,729 - 121,855,788 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.06121,053,045 - 121,191,790 (+)NCBIRnor_WKY
Rnor_6.06126,015,799 - 126,158,727 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6126,018,841 - 126,153,867 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06135,226,112 - 135,364,945 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46126,403,837 - 126,538,501 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16126,300,244 - 126,541,897 (+)NCBI
Celera6118,769,531 - 118,903,571 (+)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Novel role for K+-dependent Na+/Ca2+ exchangers in regulation of cytoplasmic free Ca2+ and contractility in arterial smooth muscle. Dong H, etal., Am J Physiol Heart Circ Physiol. 2006 Sep;291(3):H1226-35. Epub 2006 Apr 14.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Preferential expression of plasmalemmal K-dependent Na+/Ca2+ exchangers in neurons versus astrocytes. Kiedrowski L, etal., Neuroreport 2002 Aug 27;13(12):1529-32.
4. Na+/Ca2+ exchangers: three mammalian gene families control Ca2+ transport. Lytton J Biochem J. 2007 Sep 15;406(3):365-82.
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:22057188   PMID:23375655   PMID:24621671   PMID:26247047   PMID:26631410  


Genomics

Comparative Map Data
Slc24a4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26121,278,746 - 121,419,811 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6121,280,031 - 121,414,949 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6121,421,469 - 121,560,529 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.06121,716,729 - 121,855,788 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.06121,053,045 - 121,191,790 (+)NCBIRnor_WKY
Rnor_6.06126,015,799 - 126,158,727 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6126,018,841 - 126,153,867 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06135,226,112 - 135,364,945 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46126,403,837 - 126,538,501 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16126,300,244 - 126,541,897 (+)NCBI
Celera6118,769,531 - 118,903,571 (+)NCBICelera
Cytogenetic Map6q32NCBI
SLC24A4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381492,322,581 - 92,501,481 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1492,322,581 - 92,501,481 (+)EnsemblGRCh38hg38GRCh38
GRCh371492,788,925 - 92,967,825 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361491,858,678 - 92,032,349 (+)NCBINCBI36Build 36hg18NCBI36
Celera1472,841,198 - 73,019,912 (+)NCBICelera
Cytogenetic Map14q32.12NCBI
HuRef1472,971,235 - 73,150,009 (+)NCBIHuRef
CHM1_11492,727,545 - 92,906,261 (+)NCBICHM1_1
T2T-CHM13v2.01486,552,327 - 86,731,081 (+)NCBIT2T-CHM13v2.0
Slc24a4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912102,094,986 - 102,233,392 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12102,094,992 - 102,233,350 (+)EnsemblGRCm39 Ensembl
GRCm3812102,128,727 - 102,267,133 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12102,128,733 - 102,267,091 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712103,367,629 - 103,504,959 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612102,530,469 - 102,667,799 (+)NCBIMGSCv36mm8
Celera12103,346,630 - 103,484,305 (+)NCBICelera
Cytogenetic Map12ENCBI
Slc24a4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543814,609,424 - 14,759,673 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543814,609,779 - 14,765,516 (+)NCBIChiLan1.0ChiLan1.0
SLC24A4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11492,299,467 - 92,471,426 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1492,299,507 - 92,468,939 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01472,956,230 - 73,128,851 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
SLC24A4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.181,570,833 - 1,685,135 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl81,517,560 - 1,680,208 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha81,539,853 - 1,708,276 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.081,570,067 - 1,738,485 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl81,567,138 - 1,740,126 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.181,507,888 - 1,676,257 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.081,464,369 - 1,626,873 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.081,585,200 - 1,753,590 (+)NCBIUU_Cfam_GSD_1.0
Slc24a4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864012,828,736 - 12,951,485 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936733515,510 - 639,705 (+)EnsemblSpeTri2.0
SpeTri2.0NW_004936733515,546 - 639,699 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC24A4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7113,836,230 - 114,014,949 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17113,836,207 - 114,014,952 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27120,439,442 - 120,621,231 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC24A4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12470,068,924 - 70,242,148 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2470,179,850 - 70,239,517 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605357,318,844 - 57,493,322 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc24a4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247348,911,455 - 9,063,063 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247348,911,376 - 9,069,054 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc24a4
744 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:221
Count of miRNA genes:153
Interacting mature miRNAs:177
Transcripts:ENSRNOT00000008886
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
738034Anxrr5Anxiety related response QTL 55.9exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)684130881129130881Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
1331725Bp212Blood pressure QTL 2123.52475arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)693701310128713626Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
1331797Bp213Blood pressure QTL 2133.291arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)6104085867128713626Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6106752656132339866Rat
737976Pia24Pristane induced arthritis QTL 24joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)6112636280140994061Rat
1298087Iddm18Insulin dependent diabetes mellitus QTL 180.0001urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)6116506292130245370Rat

Markers in Region
D6Hmgc16  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26121,385,749 - 121,385,896 (+)MAPPERmRatBN7.2
Rnor_6.06126,124,502 - 126,124,648NCBIRnor6.0
Rnor_5.06135,336,598 - 135,336,744UniSTSRnor5.0
Celera6118,874,890 - 118,875,036UniSTS
Cytogenetic Map6q32UniSTS
RH132681  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26121,414,524 - 121,414,743 (+)MAPPERmRatBN7.2
Rnor_6.06126,153,443 - 126,153,661NCBIRnor6.0
Rnor_5.06135,364,508 - 135,364,726UniSTSRnor5.0
RGSC_v3.46126,538,108 - 126,538,326UniSTSRGSC3.4
Celera6118,903,178 - 118,903,396UniSTS
RH 3.4 Map14378.58UniSTS
Cytogenetic Map6q32UniSTS
RH143188  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26121,278,955 - 121,279,129 (+)MAPPERmRatBN7.2
Rnor_6.06126,017,781 - 126,017,954NCBIRnor6.0
Rnor_5.06135,228,511 - 135,228,684UniSTSRnor5.0
RGSC_v3.46126,402,762 - 126,402,935UniSTSRGSC3.4
Celera6118,768,456 - 118,768,629UniSTS
RH 3.4 Map6848.5UniSTS
Cytogenetic Map6q32UniSTS
BF392535  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26121,356,840 - 121,356,933 (+)MAPPERmRatBN7.2
Rnor_6.06126,095,845 - 126,095,937NCBIRnor6.0
Rnor_5.06135,307,941 - 135,308,033UniSTSRnor5.0
RGSC_v3.46126,480,627 - 126,480,719UniSTSRGSC3.4
Celera6118,845,981 - 118,846,073UniSTS
RH 3.4 Map6854.0UniSTS
Cytogenetic Map6q32UniSTS
RH138594  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26121,278,913 - 121,279,064 (+)MAPPERmRatBN7.2
Rnor_6.06126,017,739 - 126,017,889NCBIRnor6.0
Rnor_5.06135,228,469 - 135,228,619UniSTSRnor5.0
RGSC_v3.46126,402,720 - 126,402,870UniSTSRGSC3.4
Celera6118,768,414 - 118,768,564UniSTS
Cytogenetic Map6q32UniSTS
UniSTS:224816  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26121,303,322 - 121,303,428 (+)MAPPERmRatBN7.2
Rnor_6.06126,042,199 - 126,042,304NCBIRnor6.0
Rnor_5.06135,254,295 - 135,254,400UniSTSRnor5.0
RGSC_v3.46126,427,109 - 126,427,214UniSTSRGSC3.4
Celera6118,792,339 - 118,792,444UniSTS
Cytogenetic Map6q32UniSTS


Genetic Models
This gene Slc24a4 is modified in the following models/strains

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 6 7 1 7
Low 34 10 2 57 21 21 4
Below cutoff 1 3 16 10 15 10 5 7 6 14 16 5

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000008886   ⟹   ENSRNOP00000008886
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6121,301,755 - 121,414,949 (+)Ensembl
Rnor_6.0 Ensembl6126,040,631 - 126,153,867 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000088089   ⟹   ENSRNOP00000071582
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6121,280,031 - 121,414,918 (+)Ensembl
Rnor_6.0 Ensembl6126,018,856 - 126,153,836 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000089840   ⟹   ENSRNOP00000072760
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6121,280,031 - 121,414,918 (+)Ensembl
Rnor_6.0 Ensembl6126,018,841 - 126,153,437 (+)Ensembl
RefSeq Acc Id: NM_001108051   ⟹   NP_001101521
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.26121,280,031 - 121,414,918 (+)NCBI
Rnor_6.06126,018,856 - 126,153,836 (+)NCBI
Rnor_5.06135,226,112 - 135,364,945 (+)NCBI
RGSC_v3.46126,403,837 - 126,538,501 (+)RGD
Celera6118,769,531 - 118,903,571 (+)RGD
Sequence:
RefSeq Acc Id: XM_006240471   ⟹   XP_006240533
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.26121,278,746 - 121,419,811 (+)NCBI
Rnor_6.06126,015,799 - 126,158,727 (+)NCBI
Rnor_5.06135,226,112 - 135,364,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006240472   ⟹   XP_006240534
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.26121,278,746 - 121,419,811 (+)NCBI
Rnor_6.06126,015,802 - 126,158,727 (+)NCBI
Rnor_5.06135,226,112 - 135,364,945 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001101521   ⟸   NM_001108051
- Sequence:
RefSeq Acc Id: XP_006240533   ⟸   XM_006240471
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K3S9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006240534   ⟸   XM_006240472
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSRNOP00000008886   ⟸   ENSRNOT00000008886
RefSeq Acc Id: ENSRNOP00000072760   ⟸   ENSRNOT00000089840
RefSeq Acc Id: ENSRNOP00000071582   ⟸   ENSRNOT00000088089
Protein Domains
Na_Ca_ex

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K3S9-F1-model_v2 AlphaFold A0A0G2K3S9 1-622 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305926 AgrOrtholog
BioCyc Gene G2FUF-36455 BioCyc
Ensembl Genes ENSRNOG00000006729 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000008886.7 UniProtKB/TrEMBL
  ENSRNOP00000071582.1 UniProtKB/TrEMBL
  ENSRNOP00000072760 ENTREZGENE
  ENSRNOP00000072760.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000008886.7 UniProtKB/TrEMBL
  ENSRNOT00000088089.2 UniProtKB/TrEMBL
  ENSRNOT00000089840 ENTREZGENE
  ENSRNOT00000089840.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1420.30 UniProtKB/TrEMBL
InterPro K-dep_Na/Ca-exchanger-like UniProtKB/TrEMBL
  NaCa_Exmemb UniProtKB/TrEMBL
  NCX_ion-bd_dom_sf UniProtKB/TrEMBL
  SLC24A4 UniProtKB/TrEMBL
KEGG Report rno:314396 UniProtKB/TrEMBL
NCBI Gene 314396 ENTREZGENE
PANTHER PTHR10846 UniProtKB/TrEMBL
  PTHR10846:SF21 UniProtKB/TrEMBL
Pfam Na_Ca_ex UniProtKB/TrEMBL
PhenoGen Slc24a4 PhenoGen
TIGRFAMs K_NaCaexchng UniProtKB/TrEMBL
UniProt A0A0G2K0U1_RAT UniProtKB/TrEMBL
  A0A0G2K3S9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8J8XAJ2_RAT UniProtKB/TrEMBL
  D3ZCC3_RAT UniProtKB/TrEMBL
UniProt Secondary B5DF00 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-18 Slc24a4  solute carrier family 24 (sodium/potassium/calcium exchanger), member 4  Slc24a4_predicted  solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-12 Slc24a4_predicted  solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 (predicted)      Symbol and Name status set to approved 70820 APPROVED