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Gene: Cstf3 (cleavage stimulation factor subunit 3) Rattus norvegicus
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Symbol: Cstf3
Name: cleavage stimulation factor subunit 3
Description: Predicted to have mRNA binding activity. Predicted to be involved in RNA 3'-end processing. Predicted to localize to the nucleoplasm. Orthologous to human CSTF3 (cleavage stimulation factor subunit 3); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; mRNA decay pathway; INTERACTS WITH 2,4,6-trinitrotoluene; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cleavage stimulation factor, 3' pre-RNA, subunit 3; cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa; LOC362178; MGC156746
Orthologs:
Homo sapiens (human) : CSTF3 (cleavage stimulation factor subunit 3)  HGNC  Alliance
Mus musculus (house mouse) : Cstf3 (cleavage stimulation factor, 3' pre-RNA, subunit 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cstf3 (cleavage stimulation factor subunit 3)
Pan paniscus (bonobo/pygmy chimpanzee) : CSTF3 (cleavage stimulation factor subunit 3)
Canis lupus familiaris (dog) : CSTF3 (cleavage stimulation factor subunit 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cstf3 (cleavage stimulation factor subunit 3)
Sus scrofa (pig) : CSTF3 (cleavage stimulation factor subunit 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0394,530,586 - 94,603,378 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl394,530,586 - 94,607,588 (+)Ensembl
Rnor_5.03101,156,169 - 101,228,401 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4389,919,376 - 89,991,676 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1389,815,940 - 89,892,116 (+)NCBI
Celera390,026,496 - 90,097,116 (+)NCBICelera
Cytogenetic Map3q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cstf3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305901
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.