Gene: Taf1a (TATA-box binding protein associated factor, RNA polymerase I subunit A) Rattus norvegicus
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Symbol: Taf1a
Name: TATA-box binding protein associated factor, RNA polymerase I subunit A
Description: ENCODES a protein that exhibits DNA binding (inferred); INVOLVED IN transcription by RNA polymerase I (inferred); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Usher syndrome (ortholog); FOUND IN microtubule cytoskeleton (ortholog); nucleoplasm (ortholog); INTERACTS WITH acrylamide; bisphenol A; 17beta-estradiol (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC360893; MGC125031; TATA box binding protein (Tbp)-associated factor, RNA polymerase I, A; TATA box-binding protein-associated factor 1A; TATA box-binding protein-associated factor RNA polymerase I subunit A; TBP-associated factor 1A; transcription initiation factor SL1/TIF-IB subunit A
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly; Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.013101,770,278 - 101,807,975 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.013100,975,811 - 101,010,982 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41399,475,709 - 99,484,662 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11399,528,622 - 99,673,546 (+)NCBI
Celera1394,538,515 - 94,573,430 (+)NCBICelera
Cytogenetic Map13q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Taf1a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305698
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE