Sarnp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 1,835,597 - 1,889,833 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 1,251,096 - 1,305,335 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 1,251,098 - 1,305,332 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 4,015,553 - 4,069,740 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 5,891,214 - 5,945,402 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 6,192,490 - 6,246,650 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 3,246,220 - 3,300,467 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 3,246,220 - 3,300,455 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 3,217,778 - 3,271,845 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 2,121,254 - 2,176,071 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 2,121,394 - 2,176,059 (+) | NCBI | | | | | Celera | 7 | 1,121,855 - 1,176,089 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q11 | NCBI | | | | |
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SARNP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 12 | 55,752,463 - 55,817,724 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 55,752,463 - 55,817,724 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 56,146,247 - 56,211,508 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 54,437,325 - 54,497,773 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 12 | 55,798,717 - 55,863,901 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q13.2 | NCBI | | | | | HuRef | 12 | 53,185,208 - 53,249,923 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 56,112,996 - 56,178,310 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 55,719,098 - 55,784,368 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Sarnp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 10 | 128,657,633 - 128,713,507 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 128,653,202 - 128,713,498 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 128,821,764 - 128,877,638 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 128,817,333 - 128,877,629 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 128,258,827 - 128,314,694 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 128,224,868 - 128,280,566 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 131,214,346 - 131,270,179 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | D3 | NCBI | | | | | cM Map | 10 | 77.16 | NCBI | | | | |
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Sarnp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955458 | 3,402,822 - 3,451,193 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955458 | 3,396,443 - 3,451,193 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LOC100976160 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 10 | 38,497,625 - 38,577,864 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 38,494,380 - 38,574,633 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 33,093,916 - 33,159,303 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 33,818,823 - 33,879,358 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 33,808,532 - 33,814,616 (+) | Ensembl | panpan1.1 | | panPan2 | | PanPan1.1 Ensembl | 12 | 33,818,823 - 33,879,358 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SARNP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 10 | 153,682 - 203,598 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 10 | 153,766 - 203,509 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 10 | 215,941 - 265,635 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 10 | 160,817 - 210,447 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 10 | 158,977 - 210,354 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 10 | 138,488 - 188,389 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 10 | 381,571 - 431,208 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 10 | 505,504 - 555,421 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Sarnp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SARNP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 5 | 21,199,422 - 21,261,876 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 21,203,048 - 21,262,437 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 22,686,457 - 22,742,102 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SARNP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 51,702,975 - 51,768,435 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 51,707,532 - 51,768,314 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 194,225,541 - 194,291,333 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sarnp (Heterocephalus glaber - naked mole-rat) |
|