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Gene: Syncrip (synaptotagmin binding, cytoplasmic RNA interacting protein) Rattus norvegicus
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Symbol: Syncrip
Name: synaptotagmin binding, cytoplasmic RNA interacting protein
Description: Exhibits mRNA 3'-UTR binding activity and mRNA 5'-UTR binding activity. Involved in circadian rhythm; negative regulation of mRNA modification; and positive regulation of translation. Localizes to several cellular components, including the neuronal cell body; nucleus; and proximal dendrite. Orthologous to human SYNCRIP (synaptotagmin binding cytoplasmic RNA interacting protein); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Ab2-339; heterogeneous nuclear ribonucleoprotein Q; hnRNP Q; hnRNP-Q; liver regeneration-related protein LRRG077; LOC363113; synaptotagmin-binding, cytoplasmic RNA-interacting protein
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0896,100,692 - 96,266,342 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl896,105,025 - 96,266,342 (-)Ensembl
Rnor_5.0895,596,235 - 95,761,885 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4893,730,131 - 93,820,288 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1893,749,587 - 93,774,982 (-)NCBI
Celera888,978,968 - 89,067,272 (-)NCBICelera
Cytogenetic Map8q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Syncrip
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305683
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.