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Gene: Fgd5 (FYVE, RhoGEF and PH domain containing 5) Rattus norvegicus
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Symbol: Fgd5
Name: FYVE, RhoGEF and PH domain containing 5
Description: Predicted to have Rho guanyl-nucleotide exchange factor activity and metal ion binding activity. Predicted to be involved in regulation of Rho protein signal transduction. Orthologous to human FGD5 (FYVE, RhoGEF and PH domain containing 5); INTERACTS WITH bisphenol A; cocaine; orphenadrine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: FYVE, RhoGEF and PH domain-containing protein 5; LOC362402
Orthologs:
Homo sapiens (human) : FGD5 (FYVE, RhoGEF and PH domain containing 5)  HGNC  Alliance
Mus musculus (house mouse) : Fgd5 (FYVE, RhoGEF and PH domain containing 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Fgd5 (FYVE, RhoGEF and PH domain containing 5)
Pan paniscus (bonobo/pygmy chimpanzee) : FGD5 (FYVE, RhoGEF and PH domain containing 5)
Canis lupus familiaris (dog) : FGD5 (FYVE, RhoGEF and PH domain containing 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Fgd5 (FYVE, RhoGEF and PH domain containing 5)
Sus scrofa (pig) : FGD5 (FYVE, RhoGEF and PH domain containing 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04123,865,557 - 123,962,904 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04189,298,419 - 189,395,965 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44126,237,049 - 126,276,419 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14126,432,006 - 126,521,133 (+)NCBI
Celera4113,414,985 - 113,512,420 (+)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Fgd5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305589
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.