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Gene: Sde2 (SDE2 telomere maintenance homolog) Rattus norvegicus
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Symbol: Sde2
Name: SDE2 telomere maintenance homolog
Description: Predicted to have damaged DNA binding activity. Predicted to be involved in several processes, including cellular response to UV; protein ubiquitination; and regulation of cell cycle arrest. Predicted to localize to the nucleus. Orthologous to human SDE2 (SDE2 telomere maintenance homolog); INTERACTS WITH (+)-schisandrin B; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hypothetical protein LOC289315; LOC289315; MGC109518; protein SDE2 homolog; replication stress response regulator SDE2; RGD1305572; SDE2 telomere maintenance homolog (S. pombe); similar to hypothetical protein MGC30618; UPF0667 protein C1orf55 homolog
Orthologs:
Homo sapiens (human) : SDE2 (SDE2 telomere maintenance homolog)  HGNC  Alliance
Mus musculus (house mouse) : Sde2 (SDE2 telomere maintenance homolog (S. pombe))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sde2 (SDE2 telomere maintenance homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : SDE2 (SDE2 telomere maintenance homolog)
Canis lupus familiaris (dog) : SDE2 (SDE2 telomere maintenance homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sde2 (SDE2 telomere maintenance homolog)
Sus scrofa (pig) : SDE2 (SDE2 telomere maintenance homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01399,136,921 - 99,153,187 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.013104,135,522 - 104,151,788 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41396,585,245 - 96,601,482 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11396,757,755 - 96,788,687 (+)NCBI
Celera1392,124,002 - 92,140,248 (+)NCBICelera
Cytogenetic Map13q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sde2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305572
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.